Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 4.7e-94 347.8 172 100.0
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.5e-79 299.7 172 89.0
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 9.5e-79 297.0 172 88.4
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.8e-77 292.7 172 86.6
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.8e-77 292.7 172 87.2
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 8.9e-77 290.4 172 87.8
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 2.9e-67 258.8 172 76.7
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 1.4e-53 213.4 149 75.2
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 3.4e-44 182.2 174 59.2
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 3.2e-42 175.6 102 84.3
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 7.1e-42 174.5 102 83.3
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 2.7e-41 172.6 126 71.4
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 2.7e-41 172.6 140 64.3
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 3.5e-41 172.2 112 76.8
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 1.0e-40 170.6 130 70.8
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 1.0e-40 170.6 105 78.1
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 1.3e-40 170.2 175 54.9
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 3.9e-40 168.7 106 79.2
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 5.1e-40 168.3 153 59.5
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 8.7e-40 167.5 167 53.9
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 2.5e-39 166.0 114 73.7
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 2.5e-39 166.0 116 74.1
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 2.5e-39 166.0 128 67.2
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 3.3e-39 165.6 114 73.7
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 3.3e-39 165.6 100 79.0
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 4.3e-39 165.2 174 54.0
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 4.3e-39 165.2 110 75.5
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 4.3e-39 165.2 117 71.8
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 5.6e-39 164.9 151 62.3
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 5.6e-39 164.9 93 81.7
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 9.6e-39 164.1 104 77.9
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 9.6e-39 164.1 133 64.7
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 1.3e-38 163.7 119 68.9
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 2.1e-38 162.9 96 80.2
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 2.1e-38 162.9 103 77.7
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 2.8e-38 162.5 171 55.0
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 3.7e-38 162.2 112 71.4
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 3.7e-38 162.2 102 78.4
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 4.8e-38 161.8 94 81.9
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 8.2e-38 161.0 118 68.6
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 8.2e-38 161.0 114 70.2
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 1.1e-37 160.6 118 69.5
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 1.4e-37 160.2 129 67.4
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 1.8e-37 159.8 121 69.4
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 1.8e-37 159.8 166 56.0
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 3.1e-37 159.1 119 67.2
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 3.1e-37 159.1 161 57.1
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 4.0e-37 158.7 93 80.6
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 4.0e-37 158.7 93 80.6
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 4.0e-37 158.7 93 80.6
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 4.0e-37 158.7 158 57.6
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 4.0e-37 158.7 117 69.2
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 4.0e-37 158.7 128 65.6
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 5.3e-37 158.3 166 53.0
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 5.3e-37 158.3 93 79.6
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 5.3e-37 158.3 93 79.6
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.2e-36 157.1 93 78.5
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.2e-36 157.1 93 78.5
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 1.2e-36 157.1 118 66.9
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 1.5e-36 156.8 93 79.6
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 1.5e-36 156.8 116 70.7
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 2.0e-36 156.4 98 78.6
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 2.0e-36 156.4 98 78.6
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 2.0e-36 156.4 94 78.7
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 5.8e-36 154.8 124 65.3
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 5.8e-36 154.8 166 53.0
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 1.0e-35 154.1 93 76.3
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 1.3e-35 153.7 93 76.3
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 1.3e-35 153.7 115 69.6
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 1.7e-35 153.3 93 77.4
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 3.8e-35 152.1 119 65.5
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 3.8e-35 152.1 152 54.6
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 4.9e-35 151.8 149 55.7
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 4.9e-35 151.8 103 69.9
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 4.9e-35 151.8 171 51.5
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 1.1e-34 150.6 113 67.3
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 1.1e-34 150.6 113 67.3
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 1.9e-34 149.8 100 73.0
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 2.5e-34 149.4 100 73.0
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 4.2e-34 148.7 125 64.0
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 7.1e-34 147.9 108 69.4
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 1.2e-33 147.1 116 66.4
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 7.9e-33 144.4 116 64.7
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 1.0e-32 144.1 95 71.6
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 3.9e-32 142.1 123 62.6
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 3.3e-31 139.0 95 69.5
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 4.8e-30 135.2 128 56.2
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 1.8e-29 133.3 71 88.7
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 5.3e-29 131.7 79 79.7
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 3.8e-27 125.6 62 98.4
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 3.2e-26 122.5 143 50.3
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 1.6e-25 120.2 115 57.4
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 1.3e-24 117.1 85 67.1
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 3.0e-24 115.9 64 85.9
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 1.4e-21 107.1 63 79.4
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 3.1e-21 105.9 120 50.8
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 3.1e-21 105.9 63 76.2
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 2.6e-20 102.8 63 74.6
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.1e-18 97.4 70 65.7
Gohir.A10G120700 Gossypium hirsutum HOM05D007635 ORTHO05D009612 7.4e-07 58.2 58 53.4
Thecc.04G214500 Theobroma cacao HOM05D007635 ORTHO05D009612 7.4e-07 58.2 41 70.7
Gohir.D10G145600 Gossypium hirsutum HOM05D007635 ORTHO05D009612 2.8e-06 56.2 58 51.7


User provided reference genes

Program Settings