Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0474631 Rosa chinensis HOM05D007235 ORTHO05D008985 1.7e-72 275.8 132 100.0
FAN02G2734 Fragaria x ananassa HOM05D007235 ORTHO05D008985 3.1e-53 211.8 108 91.7
FvH4_6g19350 Fragaria vesca HOM05D007235 ORTHO05D008985 9.0e-53 210.3 108 91.7
FAN14G5756 Fragaria x ananassa HOM05D007235 ORTHO05D008985 9.0e-53 210.3 108 91.7
MD12G1029200 Malus domestica HOM05D007235 ORTHO05D008985 5.1e-48 194.5 108 84.3
Prupe.7G102400 Prunus persica HOM05D007235 ORTHO05D008985 1.3e-46 189.9 108 82.4
FvH4_6g19352 Fragaria vesca HOM05D007235 ORTHO05D008985 2.2e-43 179.1 108 81.5
FAN14G3457 Fragaria x ananassa HOM05D007235 ORTHO05D008985 1.9e-42 176.0 108 80.6
CiPaw.10G011900 Carya illinoinensis HOM05D007235 ORTHO05D008985 9.3e-42 173.7 109 77.1
QL07p038338 Quercus lobata HOM05D007235 ORTHO05D008985 1.3e-40 169.9 102 79.4
Manes.09G053100 Manihot esculenta HOM05D007235 ORTHO05D008985 1.8e-40 169.5 101 84.2
Actinidia05406 Actinidia chinensis HOM05D007235 ORTHO05D008985 2.3e-40 169.1 97 83.5
CSS0040083 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 2.3e-40 169.1 96 82.3
TAR623G1371 Trochodendron aralioides HOM05D007235 ORTHO05D008985 3.0e-40 168.7 96 83.3
Prupe.8G215200 Prunus persica HOM05D007235 ORTHO05D008985 5.1e-40 167.9 107 73.8
TWI74G0874 Tripterygium wilfordii HOM05D007235 ORTHO05D008985 8.7e-40 167.2 101 79.2
TWI74G1128 Tripterygium wilfordii HOM05D007235 ORTHO05D008985 1.5e-39 166.4 106 74.5
ClCG04G010150 Citrullus lanatus HOM05D007235 ORTHO05D008985 1.6e-38 162.9 106 74.5
CSS0010120 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 2.2e-38 162.5 96 80.2
CSS0012377 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 2.2e-38 162.5 96 80.2
Potri.006G210150 Populus trichocarpa HOM05D007235 ORTHO05D008985 2.2e-38 162.5 100 78.0
Haze_19642 Corylus avellana HOM05D007235 ORTHO05D008985 4.8e-38 161.4 107 72.9
CsaV3_6G040770 Cucumis sativus L. HOM05D007235 ORTHO05D008985 4.8e-38 161.4 106 73.6
Duzib093G1209 Durio zibethinus HOM05D007235 ORTHO05D008985 4.8e-38 161.4 101 81.2
Potri.006G210325 Populus trichocarpa HOM05D007235 ORTHO05D008985 8.2e-38 160.6 100 77.0
COL.COLO4_29683 Corchorus olitorius HOM05D007235 ORTHO05D008985 1.4e-37 159.8 101 79.2
Rhsim03G0070500 Rhododendron simsii HOM05D007235 ORTHO05D008985 1.8e-37 159.5 100 75.0
Rhsim03G0072800 Rhododendron simsii HOM05D007235 ORTHO05D008985 1.8e-37 159.5 100 75.0
MELO3C024556.2 Cucumis melo HOM05D007235 ORTHO05D008985 2.4e-37 159.1 106 72.6
Dinv31713 Davidia involucrata HOM05D007235 ORTHO05D008985 4.1e-37 158.3 99 77.8
Atru.chr8.1456 Acer truncatum HOM05D007235 ORTHO05D008985 5.3e-37 157.9 107 74.8
Dinv31712 Davidia involucrata HOM05D007235 ORTHO05D008985 1.2e-36 156.8 99 76.8
Sabra06G0161900 Salix brachista HOM05D007235 ORTHO05D008985 3.4e-36 155.2 107 70.1
Duzib106G1334 Durio zibethinus HOM05D007235 ORTHO05D008985 4.5e-36 154.8 101 76.2
Hma1.2p1_0769F.1_g215770 Hydrangea macrophylla HOM05D007235 ORTHO05D008985 2.2e-35 152.5 97 74.2
Gohir.D01G194350 Gossypium hirsutum HOM05D007235 ORTHO05D008985 2.9e-35 152.1 100 74.0
PSO339G1765 Papaver somniferum HOM05D007235 ORTHO05D008985 1.9e-34 149.4 99 63.6
Lj7C625T8 Lonicera japonica HOM05D007235 ORTHO05D008985 4.2e-34 148.3 91 78.0
DCAR_013408 Daucus carota HOM05D007235 ORTHO05D008985 5.5e-34 147.9 96 72.9
Aqoxy2G01105 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 7.9e-33 144.1 95 67.4
Aqoxy2G01077 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 1.0e-32 143.7 94 68.1
DCAR_007760 Daucus carota HOM05D007235 ORTHO05D008985 1.8e-32 142.9 95 71.6
Aqoxy2G01076 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 3.9e-32 141.7 93 69.9
Migut.J01009 Erythranthe guttata HOM05D007235 ORTHO05D008985 5.1e-32 141.4 99 69.7
MBI17_g48245_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 5.1e-32 141.4 97 64.9
MBI17_g35889_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 6.7e-32 141.0 97 66.0
Lsat_1_v5_gn_9_21080 Lactuca sativa HOM05D007235 ORTHO05D008985 3.3e-31 138.7 98 64.3
PSO339G2372 Papaver somniferum HOM05D007235 ORTHO05D008985 3.3e-31 138.7 96 64.6
PSO801G0111 Papaver somniferum HOM05D007235 ORTHO05D008985 5.7e-31 137.9 96 64.6
SalBow3G1230 Salvia bowleyana HOM05D007235 ORTHO05D008985 9.7e-31 137.1 96 68.8
HPP92_006812 Vanilla planifolia HOM05D007235 ORTHO05D008985 8.2e-30 134.0 93 68.8
MD10G1176100 Malus domestica HOM05D007235 ORTHO05D008985 3.4e-28 128.6 71 84.5
SalBow3G3787 Salvia bowleyana HOM05D007235 ORTHO05D008985 3.4e-28 128.6 93 66.7
SEGI_15434 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 7.7e-28 127.5 102 58.8
Atru.chr8.1458 Acer truncatum HOM05D007235 ORTHO05D008985 5.5e-26 121.3 83 73.5
Cfa016637 Carpinus fangiana HOM05D007235 ORTHO05D008985 1.0e-24 117.1 71 80.3
FAN02G0370 Fragaria x ananassa HOM05D007235 ORTHO05D008985 8.8e-24 114.0 82 68.3
Cfa016638 Carpinus fangiana HOM05D007235 ORTHO05D008985 1.5e-23 113.2 69 82.6
AagrBONN_evm.TU.Sc2ySwM_228.2009 Anthoceros agrestis HOM05D007235 ORTHO05D008985 2.8e-22 109.0 93 55.9
Cc06_g21800 Coffea canephora HOM05D007235 ORTHO05D008985 2.8e-22 109.0 74 71.6
Haze_19644 Corylus avellana HOM05D007235 ORTHO05D008985 8.2e-22 107.5 73 71.2
Mapoly0090s0057 Marchantia polymorpha HOM05D007235 ORTHO05D008985 4.1e-21 105.1 95 48.4
ATR0820G239 Amborella trichopoda HOM05D007235 ORTHO05D008985 1.3e-19 100.1 73 67.1
Sed0026179 Sechium edule HOM05D007235 ORTHO05D008985 1.4e-18 96.7 58 79.3
Gohir.A01G204950 Gossypium hirsutum HOM05D007235 ORTHO05D008985 2.5e-18 95.9 58 77.6
Gorai.002G238500 Gossypium raimondii HOM05D007235 ORTHO05D008985 4.2e-18 95.1 58 75.9
SEGI_22450 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 2.1e-17 92.8 75 58.7
PSO801G0535 Papaver somniferum HOM05D007235 ORTHO05D008985 5.7e-15 84.7 61 60.7
MBI17_g41038_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 4.5e-12 75.1 48 68.8
Rhsim03G0070400 Rhododendron simsii HOM05D007235 ORTHO05D008985 2.9e-11 72.4 44 77.3
AagrBONN_evm.TU.Sc2ySwM_228.1996 Anthoceros agrestis HOM05D007235 ORTHO05D008985 2.1e-09 66.2 42 69.0
Lj2C141T11 Lonicera japonica HOM05D007235 ORTHO05D008985 2.1e-09 66.2 92 40.2


User provided reference genes

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