Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0473411 Rosa chinensis HOM05D025961 ORTHO05D029732 1.6e-52 209.1 107 100.0
FvH4_5g29682 Fragaria vesca HOM05D000214 ORTHO05D000131 7.9e-23 110.5 101 60.4
RcHm_v2.0_Chr1g0377901 Rosa chinensis HOM05D025961 ORTHO05D029732 4.6e-15 84.7 51 86.3
RcHm_v2.0_Chr4g0394851 Rosa chinensis HOM05D025961 ORTHO05D029732 1.8e-14 82.8 52 80.8
CSS0009917 Camellia sinensis var. sinensis HOM05D000214 ORTHO05D000131 3.8e-09 65.1 65 49.2
TWI32G1003 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 6.5e-09 64.3 96 41.7
TPR.G40762 Trifolium pratense HOM05D000214 ORTHO05D000131 1.1e-08 63.5 101 43.6
TWI79G1318 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.1e-08 63.5 82 47.6
CANSAT01G2145 Cannabis sativa HOM05D000214 ORTHO05D000131 1.9e-08 62.8 66 48.5
CANSAT35G1106 Cannabis sativa HOM05D000214 ORTHO05D000131 1.9e-08 62.8 66 50.0
CANSAT78G2396 Cannabis sativa HOM05D000214 ORTHO05D000131 1.9e-08 62.8 66 48.5
TWI36G1152 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.5e-08 62.4 78 44.9
TWI75G0296 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.5e-08 62.4 78 44.9
TWI12G1376 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.2e-08 62.0 82 47.6
TWI18G0616 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 5.5e-08 61.2 79 41.8
TWI53G0029 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 7.1e-08 60.8 90 44.4
Ca_07345_v3 Cicer arietinum L. HOM05D000214 ORTHO05D000131 9.3e-08 60.5 100 36.0
Lj1g0006237 Lotus japonicus HOM05D000214 ORTHO05D000131 9.3e-08 60.5 84 42.9
Lj1g0014986 Lotus japonicus HOM05D000214 ORTHO05D000131 9.3e-08 60.5 84 42.9
Lj2g0015900 Lotus japonicus HOM05D000214 ORTHO05D000131 9.3e-08 60.5 84 42.9
Lj3g0013193 Lotus japonicus HOM05D000214 ORTHO05D000131 9.3e-08 60.5 84 42.9
Lj3g0019801 Lotus japonicus HOM05D000214 ORTHO05D000131 9.3e-08 60.5 84 42.9
Lj4g0006853 Lotus japonicus HOM05D000214 ORTHO05D000131 9.3e-08 60.5 84 42.9
Lj4g0019962 Lotus japonicus HOM05D000214 ORTHO05D000131 9.3e-08 60.5 84 42.9
Lj5g0018502 Lotus japonicus HOM05D000214 ORTHO05D000131 9.3e-08 60.5 84 42.9
TWI31G0167 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 9.3e-08 60.5 83 42.2
TWI53G0801 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.2e-07 60.1 82 46.3
TWI77G0695 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.2e-07 60.1 82 45.1
CANSAT25G3898 Cannabis sativa HOM05D000214 ORTHO05D000131 1.6e-07 59.7 91 42.9
FAN04G1324 Fragaria x ananassa HOM05D025961 ORTHO05D029732 1.6e-07 59.7 65 50.8
TWI32G0887 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.1e-07 59.3 89 40.4
TWI60G0693 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.1e-07 59.3 96 41.7
TWI34G1310 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.5e-07 58.5 78 41.0
TWI60G1261 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.5e-07 58.5 78 41.0
CARHR258710 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.0e-06 57.0 54 50.0
FvH4_4g18642 Fragaria vesca HOM05D035352 ORTHO05D000131 1.0e-06 57.0 95 41.1
Lj1g0003300 Lotus japonicus HOM05D000214 ORTHO05D000131 1.0e-06 57.0 61 50.8
Lj1g0005097 Lotus japonicus HOM05D000214 ORTHO05D000131 1.0e-06 57.0 61 50.8
LjContig00141g0024663 Lotus japonicus HOM05D000214 ORTHO05D000131 1.0e-06 57.0 61 50.8
Pp3c1_21840 Physcomitrium patens HOM05D000214 ORTHO05D000131 1.0e-06 57.0 89 38.2
AUR62016012 Chenopodium quinoa HOM05D000257 ORTHO05D009129 1.3e-06 56.6 65 49.2
TWI74G0506 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.3e-06 56.6 78 41.0
SHI01657 Sapria himalayana HOM05D000214 ORTHO05D000131 1.8e-06 56.2 86 40.7
TWI34G1953 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.8e-06 56.2 85 43.5
TWI12G0457 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.3e-06 55.8 85 43.5
TWI23G0405 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.3e-06 55.8 85 43.5
TWI32G0342 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.3e-06 55.8 90 42.2
TWI73G0294 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.3e-06 55.8 85 43.5
EL10Ac7g17567 Beta vulgaris HOM05D000823 ORTHO05D000088 3.0e-06 55.5 45 55.6
TWI38G1241 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.0e-06 55.5 90 42.2
TWI79G0148 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.9e-06 55.1 82 40.2
SHI01777 Sapria himalayana HOM05D000214 ORTHO05D000131 5.1e-06 54.7 88 38.6
TWI14G0790 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 5.1e-06 54.7 50 54.0
TWI60G1568 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 5.1e-06 54.7 50 54.0
TWI79G0227 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 5.1e-06 54.7 50 54.0
TWI79G1619 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 5.1e-06 54.7 96 37.5
HanXRQChr17g0551131 Helianthus annuus HOM05D000214 ORTHO05D000131 6.7e-06 54.3 77 44.2
TWI15G0582 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 6.7e-06 54.3 96 39.6
HanXRQChr14g0433871 Helianthus annuus HOM05D000214 ORTHO05D000131 8.7e-06 53.9 77 44.2


User provided reference genes

Program Settings