Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0472811 Rosa chinensis HOM05D009166 ORTHO05D022628 1.2e-110 403.3 217 100.0
RcHm_v2.0_Chr2g0159441 Rosa chinensis HOM05D000002 ORTHO05D000001 2.4e-34 149.8 209 48.8
RcHm_v2.0_Chr1g0376111 Rosa chinensis HOM05D009166 ORTHO05D000001 7.6e-33 144.8 225 44.4
RcHm_v2.0_Chr3g0450851 Rosa chinensis HOM05D009166 ORTHO05D022628 5.5e-31 138.7 188 56.4
RcHm_v2.0_Chr4g0431731 Rosa chinensis HOM05D009166 ORTHO05D000001 3.5e-30 136.0 230 49.6
RcHm_v2.0_Chr3g0448481 Rosa chinensis HOM05D009166 ORTHO05D000001 5.1e-29 132.1 225 41.3
FvH4_7g23761 Fragaria vesca HOM05D009166 ORTHO05D045534 8.7e-29 131.3 247 38.9
RcHm_v2.0_Chr5g0058511 Rosa chinensis HOM05D009166 ORTHO05D000001 1.1e-28 131.0 227 48.0
RcHm_v2.0_Chr4g0393151 Rosa chinensis HOM05D009166 ORTHO05D015670 9.6e-28 127.9 227 47.6
FvH4_3g04191 Fragaria vesca HOM05D009166 ORTHO05D000001 5.3e-26 122.1 263 36.1
RcHm_v2.0_Chr3g0463031 Rosa chinensis HOM05D009166 ORTHO05D015670 1.3e-24 117.5 203 41.9
RcHm_v2.0_Chr2g0164131 Rosa chinensis HOM05D009166 ORTHO05D022628 1.9e-23 113.6 57 98.2
FvH4_4g27903 Fragaria vesca HOM05D009166 ORTHO05D045534 7.2e-15 85.1 221 35.3
RcHm_v2.0_Chr3g0480521 Rosa chinensis HOM05D000002 ORTHO05D022628 1.5e-09 67.4 46 67.4
FvH4_4g26453 Fragaria vesca HOM05D009166 ORTHO05D022628 1.3e-08 64.3 56 60.7
RcHm_v2.0_Chr1g0334441 Rosa chinensis HOM05D009166 ORTHO05D000001 6.5e-08 62.0 116 37.1
FvH4_2g16550 Fragaria vesca HOM05D007346 ORTHO05D009044 8.5e-08 61.6 50 58.0
FAN13G1190 Fragaria x ananassa HOM05D008495 ORTHO05D012517 2.5e-07 60.1 127 40.2
RcHm_v2.0_Chr7g0200091 Rosa chinensis HOM05D000002 ORTHO05D000001 4.2e-07 59.3 109 33.0
Hma1.2p1_1151F.1_g261930 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.2e-07 58.5 112 31.2
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.6e-06 57.4 111 30.6


User provided reference genes

Program Settings