Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0470951 Rosa chinensis HOM05D005989 ORTHO05D000022 2.3e-22 107.8 48 100.0
RcHm_v2.0_Chr6g0299951 Rosa chinensis HOM05D005989 ORTHO05D000022 1.6e-12 75.1 45 75.6
RcHm_v2.0_Chr5g0077831 Rosa chinensis HOM05D005989 ORTHO05D011902 1.2e-10 68.9 44 68.2
RcHm_v2.0_Chr5g0000531 Rosa chinensis HOM05D000985 ORTHO05D011902 3.4e-10 67.4 42 71.4
RcHm_v2.0_Chr7g0184971 Rosa chinensis HOM05D005989 ORTHO05D000022 3.4e-10 67.4 45 68.9
RcHm_v2.0_Chr1g0352021 Rosa chinensis HOM05D005989 ORTHO05D000022 1.3e-09 65.5 42 69.0
RcHm_v2.0_Chr6g0264461 Rosa chinensis HOM05D005989 ORTHO05D000022 1.3e-09 65.5 42 69.0
FAN24G3501 Fragaria x ananassa HOM05D007346 ORTHO05D009044 8.4e-09 62.8 41 65.9
RcHm_v2.0_Chr2g0129631 Rosa chinensis HOM05D005989 ORTHO05D000651 1.1e-08 62.4 45 64.4
RcHm_v2.0_Chr3g0459251 Rosa chinensis HOM05D005989 ORTHO05D000022 1.1e-08 62.4 45 64.4
RcHm_v2.0_Chr4g0395061 Rosa chinensis HOM05D005989 ORTHO05D000022 1.1e-08 62.4 45 64.4
FvH4_3g24991 Fragaria vesca HOM05D005989 ORTHO05D000022 1.4e-08 62.0 38 73.7
FvH4_7g14701 Fragaria vesca HOM05D000021 ORTHO05D000010 1.2e-07 58.9 45 57.8
FAN09G3243 Fragaria x ananassa HOM05D005989 ORTHO05D011902 2.1e-07 58.2 44 61.4
RcHm_v2.0_Chr6g0259301 Rosa chinensis HOM05D000155 ORTHO05D000022 1.0e-06 55.8 38 63.2
RcHm_v2.0_Chr2g0140031 Rosa chinensis HOM05D000003 ORTHO05D000004 1.3e-06 55.5 38 63.2
RcHm_v2.0_Chr2g0167951 Rosa chinensis HOM05D005989 ORTHO05D000022 1.8e-06 55.1 42 57.1
RcHm_v2.0_Chr3g0472841 Rosa chinensis HOM05D000155 ORTHO05D000022 5.1e-06 53.5 40 57.5
Medtr8g479410 Medicago truncatula HOM05D005989 ORTHO05D000022 6.7e-06 53.1 42 54.8
MD07G1021300 Malus domestica HOM05D000155 ORTHO05D000022 8.7e-06 52.8 44 52.3


User provided reference genes

Program Settings