Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 8.3e-143 510.4 260 100.0
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 3.3e-99 365.5 265 75.8
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 5.8e-88 328.2 264 67.8
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 1.1e-86 323.9 274 68.6
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 3.2e-86 322.4 263 66.5
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 2.1e-85 319.7 257 69.6
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 2.1e-85 319.7 264 65.9
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 2.7e-85 319.3 261 65.9
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 2.3e-84 316.2 268 66.0
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 2.3e-84 316.2 261 65.5
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 1.1e-83 313.9 264 64.0
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 1.9e-83 313.2 266 65.4
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 3.3e-83 312.4 224 71.9
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 3.3e-83 312.4 260 64.6
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 1.3e-82 310.5 262 66.0
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 4.8e-82 308.5 267 64.4
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 4.8e-82 308.5 179 83.8
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 4.8e-82 308.5 179 83.8
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 8.2e-82 307.8 205 76.1
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 1.1e-81 307.4 284 62.0
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 1.1e-81 307.4 263 62.7
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 1.4e-81 307.0 197 77.2
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 2.4e-81 306.2 271 64.6
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 2.4e-81 306.2 252 66.3
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 2.4e-81 306.2 241 67.2
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 3.1e-81 305.8 263 64.3
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 3.1e-81 305.8 205 75.1
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 3.1e-81 305.8 178 84.8
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 6.9e-81 304.7 263 64.6
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 1.2e-80 303.9 268 65.3
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 1.2e-80 303.9 268 65.3
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 1.2e-80 303.9 255 63.9
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 1.5e-80 303.5 245 66.1
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 2.0e-80 303.1 269 64.3
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 4.5e-80 302.0 184 81.5
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 1.0e-79 300.8 251 65.7
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 1.0e-79 300.8 263 61.6
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 1.7e-79 300.1 260 64.2
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 2.9e-79 299.3 267 60.7
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 2.9e-79 299.3 256 63.7
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 3.8e-79 298.9 265 63.4
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 3.8e-79 298.9 248 64.9
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 6.5e-79 298.1 301 58.5
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 8.4e-79 297.7 262 62.6
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 1.4e-78 297.0 179 82.1
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 2.5e-78 296.2 188 78.7
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 5.5e-78 295.0 262 61.8
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 7.1e-78 294.7 258 62.8
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 9.3e-78 294.3 266 62.0
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 2.7e-77 292.7 214 70.6
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 3.5e-77 292.4 268 60.1
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 3.5e-77 292.4 250 63.6
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 4.6e-77 292.0 241 64.7
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 1.0e-76 290.8 263 61.2
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 1.0e-76 290.8 178 81.5
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 1.0e-76 290.8 218 69.3
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 1.3e-76 290.4 268 61.2
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 1.3e-76 290.4 276 60.5
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 1.3e-76 290.4 168 83.3
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 5.1e-76 288.5 178 80.3
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 8.7e-76 287.7 178 78.1
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 8.7e-76 287.7 262 60.7
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 1.1e-75 287.3 263 60.8
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 1.9e-75 286.6 263 60.5
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 2.5e-75 286.2 261 61.7
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 9.7e-75 284.3 225 66.2
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 9.7e-75 284.3 262 61.5
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 2.8e-74 282.7 169 82.8
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 6.3e-74 281.6 265 60.0
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 8.2e-74 281.2 251 59.8
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 3.1e-73 279.3 231 63.6
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 4.5e-72 275.4 252 61.5
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 1.1e-70 270.8 230 65.2
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 2.7e-69 266.2 263 59.3
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 7.9e-69 264.6 194 70.1
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 3.0e-68 262.7 198 68.7
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 1.5e-67 260.4 242 60.3
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 1.3e-66 257.3 262 56.5
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 1.7e-66 256.9 259 56.0
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 4.8e-66 255.4 196 62.8
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 1.4e-65 253.8 217 62.7
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 3.1e-65 252.7 264 56.4
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 1.2e-64 250.8 265 55.5
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 2.0e-64 250.0 194 65.5
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 6.5e-63 245.0 175 69.7
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 4.2e-62 242.3 200 64.5
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 3.0e-60 236.1 271 52.0
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 9.7e-59 231.1 211 63.0
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 7.7e-56 221.5 123 87.0
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 4.2e-54 215.7 124 84.7
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 3.9e-52 209.1 170 67.1
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 6.5e-47 191.8 99 97.0
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 1.9e-46 190.3 206 51.0
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 2.1e-45 186.8 164 61.6
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 2.0e-43 180.3 187 54.0
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 9.1e-41 171.4 168 57.7
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 1.1e-33 147.9 129 64.3
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 8.9e-28 128.3 75 81.3
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 8.3e-26 121.7 65 86.2
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 7.5e-19 98.6 58 84.5
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 2.5e-14 83.6 103 52.4


User provided reference genes

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