Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0469971 Rosa chinensis HOM05D002206 ORTHO05D002219 6.6e-207 723.8 362 100.0
FAN05G3447 Fragaria x ananassa HOM05D002206 ORTHO05D002219 3.1e-164 582.0 351 85.2
FvH4_6g16130 Fragaria vesca HOM05D002206 ORTHO05D002219 1.7e-162 576.2 351 85.5
FAN02G0658 Fragaria x ananassa HOM05D002206 ORTHO05D002219 6.5e-162 574.3 351 84.0
FAN14G1967 Fragaria x ananassa HOM05D002206 ORTHO05D002219 3.2e-161 572.0 351 84.9
FAN14G3233 Fragaria x ananassa HOM05D002206 ORTHO05D002219 3.2e-161 572.0 351 84.9
Prupe.6G234700 Prunus persica HOM05D002206 ORTHO05D002219 6.8e-119 431.4 352 66.2
MD12G1115600 Malus domestica HOM05D002206 ORTHO05D002219 4.0e-111 405.6 352 63.1
Haze_20572 Corylus avellana HOM05D002206 ORTHO05D002219 5.1e-74 282.3 369 46.6
CANSAT80G0518 Cannabis sativa HOM05D002206 ORTHO05D002219 1.0e-69 268.1 357 49.0
Potri.006G126300 Populus trichocarpa HOM05D002206 ORTHO05D002219 7.1e-68 261.9 345 47.2
Sabra06G0099600 Salix brachista HOM05D002206 ORTHO05D002219 1.4e-63 247.7 338 47.0
QL07p044034 Quercus lobata HOM05D002206 ORTHO05D002219 5.3e-63 245.7 342 47.4
MD04G1095600 Malus domestica HOM05D002206 ORTHO05D002219 1.2e-62 244.6 272 53.7
Manes.09G064100 Manihot esculenta HOM05D002206 ORTHO05D002219 1.4e-60 237.7 339 43.7
Thecc.05G063300 Theobroma cacao HOM05D002206 ORTHO05D002219 7.2e-60 235.3 352 44.6
Duzib128G0606 Durio zibethinus HOM05D002206 ORTHO05D002219 8.8e-58 228.4 352 43.2
CiPaw.10G132600 Carya illinoinensis HOM05D002206 ORTHO05D002219 7.4e-57 225.3 341 44.3
Duzib093G1485 Durio zibethinus HOM05D002206 ORTHO05D002219 7.4e-57 225.3 333 43.8
Gorai.007G373500 Gossypium raimondii HOM05D002206 ORTHO05D002219 8.2e-56 221.9 297 46.8
Gohir.A11G324300 Gossypium hirsutum HOM05D002206 ORTHO05D002219 2.4e-55 220.3 333 44.1
Gohir.D11G343400 Gossypium hirsutum HOM05D002206 ORTHO05D002219 9.1e-55 218.4 333 43.5
Ciclev10011603m.g Citrus clementina HOM05D002206 ORTHO05D002219 2.9e-53 213.4 307 45.3
Gohir.A01G214600 Gossypium hirsutum HOM05D002206 ORTHO05D002219 1.4e-52 211.1 352 42.3
Gorai.002G247800 Gossypium raimondii HOM05D002206 ORTHO05D002219 7.2e-52 208.8 352 42.0
COL.COLO4_26986 Corchorus olitorius HOM05D006384 ORTHO05D001525 6.1e-51 205.7 323 43.3
Atru.chr8.1841 Acer truncatum HOM05D002206 ORTHO05D002219 2.0e-49 200.7 408 36.8
Gohir.D01G203100 Gossypium hirsutum HOM05D002206 ORTHO05D002219 5.7e-49 199.1 352 41.2
CiPaw.09G174000 Carya illinoinensis HOM05D002206 ORTHO05D002219 1.4e-47 194.5 339 41.3
TWI74G0209 Tripterygium wilfordii HOM05D002206 ORTHO05D002219 1.6e-43 181.0 342 39.8
Duzib106G1082 Durio zibethinus HOM05D002206 ORTHO05D002219 4.7e-43 179.5 195 54.9
TWI53G2014 Tripterygium wilfordii HOM05D002206 ORTHO05D002219 5.7e-41 172.6 340 37.6
GSVIVG01025710001 Vitis vinifera HOM05D002206 ORTHO05D002219 2.8e-40 170.2 354 36.7
Manes.08G008900 Manihot esculenta HOM05D002206 ORTHO05D002219 3.5e-38 163.3 381 35.2
TAR623G1051 Trochodendron aralioides HOM05D002206 ORTHO05D002219 1.1e-36 158.3 404 33.9
Eucgr.K01251 Eucalyptus grandis HOM05D002206 ORTHO05D002219 3.3e-33 146.7 336 34.2
PGR142G3844 Punica granatum HOM05D002206 ORTHO05D002219 1.7e-32 144.4 274 38.7
Glyma.13G144600 Glycine max HOM05D002206 ORTHO05D002219 4.8e-32 142.9 358 34.1
MELO3C014217.2 Cucumis melo HOM05D002206 ORTHO05D002219 1.4e-31 141.4 357 31.4
Sed0020845 Sechium edule HOM05D002206 ORTHO05D002219 1.8e-31 141.0 355 31.8
Sabra16G0096800 Salix brachista HOM05D002206 ORTHO05D002219 9.1e-31 138.7 275 39.3
CsaV3_6G039760 Cucumis sativus L. HOM05D002206 ORTHO05D002219 6.5e-29 132.5 358 30.7
Phvul.007G150100 Phaseolus vulgaris HOM05D002206 ORTHO05D002219 2.5e-28 130.6 358 33.0
ClCG04G009190 Citrullus lanatus HOM05D002206 ORTHO05D002219 3.6e-27 126.7 380 30.3
Glyma.10G057800 Glycine max HOM05D002206 ORTHO05D002219 2.3e-26 124.0 359 33.4
Lalb_Chr21g0314941 Lupinus albus HOM05D002206 ORTHO05D002219 4.0e-26 123.2 356 32.3
MD04G1095700 Malus domestica HOM05D002206 ORTHO05D002219 4.0e-26 123.2 226 40.3
Lj5g0008179 Lotus japonicus HOM05D002206 ORTHO05D002219 1.2e-25 121.7 366 33.3
arahy.Tifrunner.gnm1.ann1.ILX5DK Arachis hypogaea HOM05D002206 ORTHO05D002219 4.4e-25 119.8 355 32.1
arahy.Tifrunner.gnm1.ann1.S5L34I Arachis hypogaea HOM05D002206 ORTHO05D002219 4.4e-25 119.8 355 32.1
Ca_11487_v3 Cicer arietinum L. HOM05D002206 ORTHO05D002219 3.7e-24 116.7 358 33.5
Nn2g11536 Nelumbo nucifera HOM05D002206 ORTHO05D002219 6.3e-24 115.9 399 29.1
VMungo0720G0621 Vigna mungo HOM05D002206 ORTHO05D002219 2.4e-23 114.0 356 31.5
Psat6g072000 Pisum sativum HOM05D002206 ORTHO05D002219 3.1e-23 113.6 360 31.9
Medtr1g063940 Medicago truncatula HOM05D002206 ORTHO05D002219 5.4e-23 112.8 364 31.9
Nn2g13745 Nelumbo nucifera HOM05D002206 ORTHO05D002219 4.5e-22 109.8 401 27.2
Dinv37300 Davidia involucrata HOM05D002206 ORTHO05D002219 1.3e-21 108.2 388 27.1
TPR.G35218 Trifolium pratense HOM05D002206 ORTHO05D002219 1.5e-20 104.8 373 31.6
Sp4g19310 Schrenkiella parvula HOM05D002206 ORTHO05D002219 3.0e-18 97.1 356 27.5
Thhalv10016738m.g Eutrema salsugineum HOM05D002206 ORTHO05D002219 6.3e-16 89.4 196 34.2
Aqoxy1G01186 Aquilegia oxysepala HOM05D002206 ORTHO05D002219 6.6e-13 79.3 381 25.2
Lsat_1_v5_gn_1_53040 Lactuca sativa HOM05D002206 ORTHO05D002219 1.5e-12 78.2 301 27.6
MBI18_g39090_MAGBIO Magnolia biondii HOM05D002206 ORTHO05D002219 3.3e-12 77.0 329 25.2
Carub.0004s1889 Capsella rubella HOM05D002206 ORTHO05D002219 9.5e-12 75.5 159 35.8
Hma1.2p1_0714F.1_g207920 Hydrangea macrophylla HOM05D002206 ORTHO05D002219 1.8e-10 71.2 259 29.7
Lj3A983T64 Lonicera japonica HOM05D002206 ORTHO05D002219 1.8e-10 71.2 308 26.0
AT2G37025 Arabidopsis thaliana HOM05D002206 ORTHO05D002219 3.4e-09 67.0 217 29.0
CDE05G0207 Ceratophyllum demersum HOM05D002206 ORTHO05D002219 4.4e-09 66.6 238 27.7
GSVIVG01025226001 Vitis vinifera HOM05D002206 ORTHO05D002219 7.5e-09 65.9 313 26.5
Oeu016974.2 Olea europaea HOM05D002206 ORTHO05D002219 4.9e-08 63.2 224 25.9
Cpa.g.sc92.110 Carica papaya HOM05D046820 ORTHO05D043555 1.1e-07 62.0 59 45.8
CARHR131510 Cardamine hirsuta HOM05D002206 ORTHO05D002219 1.9e-07 61.2 155 29.0
PSO801G0697 Papaver somniferum HOM05D002206 ORTHO05D002219 3.2e-07 60.5 170 31.2
MBI18_g39091_MAGBIO Magnolia biondii HOM05D002206 ORTHO05D002219 2.7e-06 57.4 62 46.8
Cc06_g04060 Coffea canephora HOM05D002206 ORTHO05D002219 4.6e-06 56.6 121 32.2
BcaB01g03800 Brassica carinata HOM05D002206 ORTHO05D002219 6.0e-06 56.2 150 34.0
Peaxi162Scf00123g01118 Petunia axillaris HOM05D002206 ORTHO05D002219 6.0e-06 56.2 339 25.7


User provided reference genes

Program Settings