Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0469201 Rosa chinensis HOM05D000003 ORTHO05D000651 4.6e-31 137.1 63 100.0
RcHm_v2.0_Chr3g0453641 Rosa chinensis HOM05D000003 ORTHO05D000004 5.7e-21 103.6 58 77.6
RcHm_v2.0_Chr3g0455401 Rosa chinensis HOM05D000003 ORTHO05D000004 2.1e-20 101.7 58 75.9
RcHm_v2.0_Chr2g0160431 Rosa chinensis HOM05D000003 ORTHO05D000004 3.7e-20 100.9 58 74.1
RcHm_v2.0_Chr3g0462451 Rosa chinensis HOM05D005989 ORTHO05D000022 6.3e-20 100.1 58 74.1
RcHm_v2.0_Chr2g0140031 Rosa chinensis HOM05D000003 ORTHO05D000004 2.0e-10 68.6 56 53.6
FvH4_6g51131 Fragaria vesca HOM05D000155 ORTHO05D000022 7.7e-10 66.6 58 50.0
RcHm_v2.0_Chr5g0018801 Rosa chinensis HOM05D000003 ORTHO05D000651 7.7e-10 66.6 44 61.4
MD07G1021300 Malus domestica HOM05D000155 ORTHO05D000022 4.2e-08 60.8 58 44.8
RcHm_v2.0_Chr6g0251621 Rosa chinensis HOM05D000155 ORTHO05D000022 2.1e-07 58.5 58 43.1
RcHm_v2.0_Chr3g0465511 Rosa chinensis HOM05D000155 ORTHO05D000022 4.6e-07 57.4 28 85.7
RcHm_v2.0_Chr7g0185631 Rosa chinensis HOM05D000155 ORTHO05D000022 4.6e-07 57.4 28 85.7


User provided reference genes

Program Settings