Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 8.0e-74 280.4 149 100.0
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 8.0e-66 253.8 146 87.0
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 4.0e-65 251.5 146 87.0
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 2.6e-64 248.8 146 86.3
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 6.6e-60 234.2 146 84.2
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 2.5e-59 232.3 146 83.6
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 1.9e-51 206.1 154 77.9
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 1.1e-46 190.3 144 67.4
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 1.4e-46 189.9 152 67.8
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 1.1e-43 180.3 153 62.7
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 1.9e-43 179.5 146 66.4
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 4.3e-43 178.3 152 65.1
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 1.2e-42 176.8 150 64.0
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 2.1e-42 176.0 149 62.4
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 2.8e-42 175.6 150 64.0
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 1.4e-41 173.3 150 62.0
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 4.4e-40 168.3 151 60.9
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 1.3e-39 166.8 150 61.3
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 1.7e-39 166.4 116 72.4
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 1.9e-38 162.9 175 54.9
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 7.1e-38 161.0 115 73.0
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 2.1e-37 159.5 153 60.1
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 2.7e-37 159.1 149 59.7
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 3.5e-37 158.7 120 66.7
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.3e-36 156.8 153 56.2
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 3.9e-36 155.2 148 59.5
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 3.9e-36 155.2 161 55.3
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 6.6e-36 154.5 142 57.7
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 6.6e-36 154.5 153 56.2
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 8.6e-36 154.1 112 67.9
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 7.3e-35 151.0 115 67.0
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 1.6e-34 149.8 119 63.9
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 3.6e-34 148.7 149 56.4
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 4.7e-34 148.3 123 63.4
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 8.1e-34 147.5 142 62.7
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 8.1e-34 147.5 122 64.8
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 1.8e-33 146.4 115 60.9
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 8.9e-33 144.1 93 77.4
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 1.5e-32 143.3 150 55.3
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 2.0e-32 142.9 151 55.0
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 3.4e-32 142.1 88 80.7
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 3.4e-32 142.1 111 62.2
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 4.4e-32 141.7 150 54.0
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 7.6e-32 141.0 92 78.3
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 7.6e-32 141.0 150 54.0
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 7.6e-32 141.0 150 52.0
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 9.9e-32 140.6 150 53.3
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 9.9e-32 140.6 113 67.3
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 1.7e-31 139.8 149 53.0
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 2.9e-31 139.0 90 78.9
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 3.8e-31 138.7 150 54.0
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 3.8e-31 138.7 132 56.8
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 3.8e-31 138.7 92 73.9
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 4.9e-31 138.3 115 64.3
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 6.4e-31 137.9 146 54.8
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 6.4e-31 137.9 116 65.5
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 6.4e-31 137.9 149 52.3
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 1.9e-30 136.3 154 52.6
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 1.9e-30 136.3 110 64.5
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 1.9e-30 136.3 111 60.4
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 2.4e-30 136.0 92 71.7
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 5.4e-30 134.8 122 64.8
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 9.2e-30 134.0 154 51.9
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 9.2e-30 134.0 116 63.8
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 1.6e-29 133.3 120 61.7
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 1.6e-29 133.3 115 66.1
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 2.7e-29 132.5 150 52.0
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 2.7e-29 132.5 106 66.0
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 2.7e-29 132.5 93 72.0
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 3.5e-29 132.1 89 71.9
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 7.8e-29 131.0 117 59.8
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 7.8e-29 131.0 117 59.8
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 7.8e-29 131.0 106 65.1
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 1.0e-28 130.6 117 61.5
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 3.9e-28 128.6 113 61.9
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 8.7e-28 127.5 90 73.3
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 1.5e-27 126.7 111 62.2
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 3.3e-27 125.6 110 65.5
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 4.3e-27 125.2 111 55.9
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 4.3e-27 125.2 88 70.5
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 5.6e-27 124.8 108 65.7
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 1.6e-26 123.2 114 56.1
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 4.7e-26 121.7 110 63.6
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 6.2e-26 121.3 113 58.4
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 8.1e-26 120.9 111 59.5
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 4.0e-25 118.6 68 85.3
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 1.5e-24 116.7 92 67.4
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 2.0e-24 116.3 153 47.1
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 7.6e-24 114.4 153 46.4
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 2.9e-23 112.5 76 73.7
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 2.4e-22 109.4 72 70.8
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 4.2e-22 108.6 105 58.1
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 5.4e-22 108.2 73 72.6
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 5.4e-22 108.2 103 51.5
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.6e-18 96.7 85 63.5
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 4.0e-17 92.0 106 52.8
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 2.7e-13 79.3 73 58.9
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 1.8e-09 66.6 98 42.9
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 4.0e-09 65.5 108 40.7
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 5.8e-08 61.6 82 43.9
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 5.5e-06 55.1 48 56.2


User provided reference genes

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