Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0468131 Rosa chinensis HOM05D007476 ORTHO05D006998 4.6e-94 348.2 218 100.0
Prupe.6G244900 Prunus persica HOM05D007476 ORTHO05D006998 9.6e-52 207.6 215 67.4
FAN05G2812 Fragaria x ananassa HOM05D007476 ORTHO05D006998 7.6e-49 198.0 220 67.3
FAN02G2102 Fragaria x ananassa HOM05D007476 ORTHO05D006998 1.6e-46 190.3 220 65.9
FAN14G0122 Fragaria x ananassa HOM05D007476 ORTHO05D006998 1.8e-42 176.8 206 65.5
MD12G1129600 Malus domestica HOM05D007476 ORTHO05D006998 4.2e-39 165.6 216 57.9
FvH4_6g14930 Fragaria vesca HOM05D007476 ORTHO05D006998 3.8e-32 142.5 220 57.7
Cfa017474 Carpinus fangiana HOM05D007476 ORTHO05D006998 8.8e-29 131.3 212 48.6
FAN09G1326 Fragaria x ananassa HOM05D007476 ORTHO05D006998 3.3e-28 129.4 220 54.5
MD04G1111200 Malus domestica HOM05D007476 ORTHO05D006998 2.2e-27 126.7 118 72.0
QL07p045831 Quercus lobata HOM05D007476 ORTHO05D006998 9.1e-26 121.3 138 68.1
Duzib093G1301 Durio zibethinus HOM05D007476 ORTHO05D006998 1.5e-25 120.6 193 51.3
Gohir.A09G160400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 8.5e-24 114.8 199 52.3
Thecc.05G050900 Theobroma cacao HOM05D007476 ORTHO05D006998 1.4e-23 114.0 194 51.0
CANSAT80G1705 Cannabis sativa HOM05D007476 ORTHO05D006998 1.8e-21 107.1 229 41.5
Gohir.A13G076000 Gossypium hirsutum HOM05D007476 ORTHO05D006998 2.3e-21 106.7 215 45.6
Gorai.001G248500 Gossypium raimondii HOM05D007476 ORTHO05D006998 6.7e-21 105.1 192 47.4
COL.COLO4_10302 Corchorus olitorius HOM05D007476 ORTHO05D006998 9.7e-20 101.3 139 56.8
CiPaw.10G138800 Carya illinoinensis HOM05D007476 ORTHO05D006998 3.1e-18 96.3 230 44.3
Potri.016G082900 Populus trichocarpa HOM05D007476 ORTHO05D006998 4.1e-18 95.9 221 47.1
Haze_20680 Corylus avellana HOM05D007476 ORTHO05D006998 1.6e-17 94.0 288 35.1
Gohir.D04G116600 Gossypium hirsutum HOM05D007476 ORTHO05D006998 2.0e-17 93.6 210 41.9
Gorai.009G421500 Gossypium raimondii HOM05D007476 ORTHO05D006998 2.0e-17 93.6 210 41.9
Gohir.A04G077400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 1.7e-16 90.5 210 42.4
Atru.chr8.2515 Acer truncatum HOM05D007476 ORTHO05D006998 2.2e-16 90.1 263 40.7
Ciclev10012743m.g Citrus clementina HOM05D007476 ORTHO05D006998 2.9e-16 89.7 177 50.3
Solyc10g085970.3 Solanum lycopersicum HOM05D007476 ORTHO05D006998 2.9e-16 89.7 171 47.4
Duzib128G0759 Durio zibethinus HOM05D007476 ORTHO05D006998 3.8e-16 89.4 171 47.4
Phvul.001G173200 Phaseolus vulgaris HOM05D007476 ORTHO05D006998 5.0e-16 89.0 203 44.8
VMungo1383G2744 Vigna mungo HOM05D007476 ORTHO05D006998 6.5e-16 88.6 206 44.7
CiPaw.09G184800 Carya illinoinensis HOM05D007476 ORTHO05D006998 3.2e-15 86.3 251 41.0
Gohir.D13G096300 Gossypium hirsutum HOM05D007476 ORTHO05D006998 1.2e-14 84.3 192 43.8
GSVIVG01025570001 Vitis vinifera HOM05D007476 ORTHO05D006998 2.1e-14 83.6 122 60.7
arahy.Tifrunner.gnm1.ann1.UZX3W4 Arachis hypogaea HOM05D007476 ORTHO05D006998 8.0e-14 81.6 172 48.8
Sopen10g035340 Solanum pennellii HOM05D007476 ORTHO05D006998 1.4e-13 80.9 183 44.8
Eucgr.A01204 Eucalyptus grandis HOM05D007476 ORTHO05D006998 2.3e-13 80.1 156 51.3
Lalb_Chr20g0113001 Lupinus albus HOM05D007476 ORTHO05D006998 4.0e-13 79.3 204 44.6
EL10Ac7g17261 Beta vulgaris HOM05D007476 ORTHO05D006998 2.0e-12 77.0 148 48.0
arahy.Tifrunner.gnm1.ann1.KRM1EW Arachis hypogaea HOM05D007476 ORTHO05D006998 3.3e-12 76.3 173 48.6
THA.LOC104823246 Tarenaya hassleriana HOM05D010138 ORTHO05D006998 5.7e-12 75.5 162 44.4
Dinv37238 Davidia involucrata HOM05D007476 ORTHO05D006998 2.2e-11 73.6 164 47.6
Potri.006G134000 Populus trichocarpa HOM05D007476 ORTHO05D006998 3.7e-11 72.8 166 48.2
Glyma.03G176200 Glycine max HOM05D007476 ORTHO05D006998 6.3e-11 72.0 210 42.9
Eucgr.K03190 Eucalyptus grandis HOM05D007476 ORTHO05D006998 8.2e-11 71.6 149 47.7
PGSC0003DMG400017597 Solanum tuberosum HOM05D000217 ORTHO05D000121 1.1e-10 71.2 150 46.0
Cc06_g03350 Coffea canephora HOM05D007476 ORTHO05D006998 3.1e-10 69.7 45 80.0
Gorai.006G177500 Gossypium raimondii HOM05D007476 ORTHO05D006998 4.1e-10 69.3 121 46.3
ECA238G2167 Erigeron canadensis HOM05D007476 ORTHO05D006998 1.2e-09 67.8 169 45.0
AT5G02770 Arabidopsis thaliana HOM05D010138 ORTHO05D006998 1.6e-09 67.4 77 54.5
AUR62040509 Chenopodium quinoa HOM05D007476 ORTHO05D006998 5.9e-09 65.5 176 43.8
PGSC0003DMG400002015 Solanum tuberosum HOM05D007476 ORTHO05D006998 5.9e-09 65.5 156 44.9
BolC7t43445H Brassica oleracea HOM05D001366 ORTHO05D008529 7.7e-09 65.1 50 70.0
Sp6g39810 Schrenkiella parvula HOM05D010138 ORTHO05D006998 1.3e-08 64.3 164 41.5
BcaB05g21871 Brassica carinata HOM05D010138 ORTHO05D006998 1.7e-08 63.9 170 41.8
vmacro20080 Vaccinium macrocarpon HOM05D007476 ORTHO05D006998 1.7e-08 63.9 209 41.6
Sc20g0004220 Simmondsia chinensis HOM05D007476 ORTHO05D006998 2.2e-08 63.5 132 48.5
Thhalv10014656m.g Eutrema salsugineum HOM05D010138 ORTHO05D006998 3.8e-08 62.8 113 44.2
Hund12067 Selenicereus undatus HOM05D007476 ORTHO05D006998 3.8e-08 62.8 251 30.7
Actinidia05282 Actinidia chinensis HOM05D007476 ORTHO05D006998 6.5e-08 62.0 72 56.9
BcaC06g34403 Brassica carinata HOM05D001366 ORTHO05D003220 6.5e-08 62.0 43 76.7
AL6G12020 Arabidopsis lyrata HOM05D010138 ORTHO05D006998 8.5e-08 61.6 163 41.1
CARHR210610 Cardamine hirsuta HOM05D010138 ORTHO05D006998 8.5e-08 61.6 199 39.7
Glyma.19G176700 Glycine max HOM05D007476 ORTHO05D006998 8.5e-08 61.6 209 44.0
Lalb_Chr25g0289331 Lupinus albus HOM05D007476 ORTHO05D006998 1.1e-07 61.2 150 44.7
Nitab4.5_0000754g0030 Nicotiana tabacum HOM05D007476 ORTHO05D006998 1.1e-07 61.2 206 37.9
Sopen09g001950 Solanum pennellii HOM05D007476 ORTHO05D006998 1.1e-07 61.2 205 41.0
Carub.0006s0153 Capsella rubella HOM05D010138 ORTHO05D006998 1.5e-07 60.8 163 41.7
HanXRQChr14g0453431 Helianthus annuus HOM05D007476 ORTHO05D006998 1.5e-07 60.8 77 53.2
Oeu026075.1 Olea europaea HOM05D007476 ORTHO05D006998 2.5e-07 60.1 210 38.6
Solyc09g007090.4 Solanum lycopersicum HOM05D007476 ORTHO05D006998 3.2e-07 59.7 205 40.5
TAR375G0914 Trochodendron aralioides HOM05D000137 ORTHO05D000382 3.2e-07 59.7 78 48.7
Dinv35685 Davidia involucrata HOM05D007476 ORTHO05D006998 9.4e-07 58.2 223 37.7
HanXRQChr07g0195971 Helianthus annuus HOM05D007476 ORTHO05D006998 1.2e-06 57.8 76 50.0
ClCG10G020700 Citrullus lanatus HOM05D029433 ORTHO05D028973 2.1e-06 57.0 78 50.0
CDE02G0064 Ceratophyllum demersum HOM05D007476 ORTHO05D006998 3.6e-06 56.2 46 67.4
COL.COLO4_03678 Corchorus olitorius HOM05D001978 ORTHO05D003036 3.6e-06 56.2 145 35.2
PGR004G1949 Punica granatum HOM05D007476 ORTHO05D006998 3.6e-06 56.2 201 38.3
C07p29060 Brassica napus HOM05D001366 ORTHO05D008529 4.7e-06 55.8 50 62.0
Sabra06G0105300 Salix brachista HOM05D007476 ORTHO05D006998 4.7e-06 55.8 278 27.0


User provided reference genes

Program Settings