Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0462981 Rosa chinensis HOM05D000184 ORTHO05D000032 8.2e-79 297.0 148 100.0
FvH4_6g11361 Fragaria vesca HOM05D000184 ORTHO05D000032 4.5e-61 238.0 138 88.4
FAN14G4403 Fragaria x ananassa HOM05D000184 ORTHO05D000032 4.5e-61 238.0 138 88.4
FAN14G5163 Fragaria x ananassa HOM05D000184 ORTHO05D000032 8.0e-58 227.3 135 86.7
FAN05G3166 Fragaria x ananassa HOM05D000184 ORTHO05D000032 8.8e-49 197.2 149 73.2
FAN09G2474 Fragaria x ananassa HOM05D000184 ORTHO05D000032 7.0e-46 187.6 149 70.5
FAN02G4066 Fragaria x ananassa HOM05D000184 ORTHO05D000032 8.6e-44 180.6 138 73.2
MD04G1154300 Malus domestica HOM05D000184 ORTHO05D000032 2.6e-24 115.9 140 52.9
Prupe.6G278300 Prunus persica HOM05D000184 ORTHO05D000032 5.8e-24 114.8 139 52.5
MD12G1167700 Malus domestica HOM05D000184 ORTHO05D000032 3.7e-23 112.1 148 50.0
Ciclev10013453m.g Citrus clementina HOM05D000184 ORTHO05D000032 6.0e-21 104.8 145 52.4
Dinv23129 Davidia involucrata HOM05D000184 ORTHO05D000032 3.9e-20 102.1 150 46.7
Gorai.006G182800 Gossypium raimondii HOM05D000184 ORTHO05D000032 6.2e-18 94.7 157 43.9
Gohir.D09G161100 Gossypium hirsutum HOM05D000184 ORTHO05D000032 1.1e-17 94.0 157 43.9
Actinidia11581 Actinidia chinensis HOM05D000544 ORTHO05D000479 5.2e-17 91.7 140 45.7
Duzib093G1213 Durio zibethinus HOM05D000184 ORTHO05D000032 5.2e-17 91.7 144 47.9
Actinidia29096 Actinidia chinensis HOM05D000544 ORTHO05D000032 2.6e-16 89.4 137 46.0
Gohir.A09G165500 Gossypium hirsutum HOM05D000184 ORTHO05D000032 9.9e-16 87.4 164 40.9
TWI53G0932 Tripterygium wilfordii HOM05D000184 ORTHO05D000032 6.4e-15 84.7 151 44.4
Hma1.2p1_0362F.1_g136340 Hydrangea macrophylla HOM05D000184 ORTHO05D000032 4.1e-14 82.0 128 43.0
Lsat_1_v5_gn_9_34740 Lactuca sativa HOM05D000184 ORTHO05D000032 7.1e-14 81.3 142 42.3
Potri.016G117000 Populus trichocarpa HOM05D000184 ORTHO05D000032 2.7e-13 79.3 148 42.6
Thecc.05G015300 Theobroma cacao HOM05D000184 ORTHO05D000032 3.5e-13 79.0 138 42.0
TWI74G1535 Tripterygium wilfordii HOM05D000184 ORTHO05D000032 3.5e-13 79.0 140 48.6
COL.COLO4_14528 Corchorus olitorius HOM05D000184 ORTHO05D000032 1.3e-12 77.0 145 43.4
DCAR_028852 Daucus carota HOM05D000544 ORTHO05D000479 1.3e-12 77.0 155 39.4
Cpa.g.c34762 Carica papaya HOM05D000184 ORTHO05D000032 3.0e-12 75.9 159 35.2
PGR031G0832 Punica granatum HOM05D000184 ORTHO05D000032 3.0e-12 75.9 146 39.0
Atru.chr8.2251 Acer truncatum HOM05D000184 ORTHO05D000032 1.1e-11 73.9 145 40.7
CiPaw.09G209900 Carya illinoinensis HOM05D000184 ORTHO05D000032 1.1e-11 73.9 106 51.9
QL07p035601 Quercus lobata HOM05D000184 ORTHO05D000032 1.8e-09 66.6 74 59.5
CSS0019219 Camellia sinensis var. sinensis HOM05D000184 ORTHO05D000032 3.4e-08 62.4 151 32.5
Potri.006G101000 Populus trichocarpa HOM05D000184 ORTHO05D000032 5.8e-08 61.6 130 38.5
Oeu029411.1 Olea europaea HOM05D000184 ORTHO05D000032 1.7e-07 60.1 152 38.2
Haze_21010 Corylus avellana HOM05D000184 ORTHO05D000032 3.8e-07 58.9 149 39.6
SalBow7G3593 Salvia bowleyana HOM05D000184 ORTHO05D000032 6.4e-07 58.2 134 36.6
TWI77G0291 Tripterygium wilfordii HOM05D000184 ORTHO05D000032 2.4e-06 56.2 72 47.2
GSVIVG01011163001 Vitis vinifera HOM05D000184 ORTHO05D000032 9.2e-06 54.3 93 43.0


User provided reference genes

Program Settings