Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0461071 Rosa chinensis HOM05D008564 ORTHO05D010893 9.5e-102 373.6 205 100.0
FvH4_6g10310 Fragaria vesca HOM05D008564 ORTHO05D010893 2.8e-69 265.8 206 73.8
FAN09G0205 Fragaria x ananassa HOM05D008564 ORTHO05D010893 5.3e-68 261.5 211 70.6
FAN05G1300 Fragaria x ananassa HOM05D008564 ORTHO05D010893 5.5e-57 224.9 210 65.7
FAN05G2277 Fragaria x ananassa HOM05D008564 ORTHO05D010893 2.1e-56 223.0 215 64.2
FAN02G3455 Fragaria x ananassa HOM05D008564 ORTHO05D010893 3.9e-47 192.2 206 60.2
Prupe.6G286800 Prunus persica HOM05D008564 ORTHO05D010893 1.1e-33 147.5 177 52.0
MD12G1182100 Malus domestica HOM05D008564 ORTHO05D010893 3.0e-31 139.4 181 49.7
MD04G1168500 Malus domestica HOM05D008564 ORTHO05D010893 4.4e-30 135.6 183 48.6
Ciclev10013769m.g Citrus clementina HOM05D008564 ORTHO05D010893 1.4e-23 114.0 179 41.9
QL07p033572 Quercus lobata HOM05D008564 ORTHO05D010893 1.5e-22 110.5 191 40.8
Dinv25287 Davidia involucrata HOM05D008564 ORTHO05D010893 2.2e-21 106.7 179 39.1
Gohir.D01G220600 Gossypium hirsutum HOM05D008564 ORTHO05D010893 3.1e-20 102.8 165 40.0
Gorai.002G267200 Gossypium raimondii HOM05D008564 ORTHO05D010893 3.1e-20 102.8 165 40.0
Hma1.2p1_2300F.1_g319270 Hydrangea macrophylla HOM05D008564 ORTHO05D010893 2.7e-19 99.8 193 34.7
Sabra16G0129300 Salix brachista HOM05D008564 ORTHO05D010893 2.7e-19 99.8 196 36.2
Cpa.g.sc33.105 Carica papaya HOM05D008564 ORTHO05D010893 1.3e-18 97.4 190 35.3
MELO3C009121.2 Cucumis melo HOM05D008564 ORTHO05D010893 1.1e-17 94.4 179 39.1
Oeu023746.1 Olea europaea HOM05D008564 ORTHO05D010893 1.1e-17 94.4 158 39.2
ClCG10G022540 Citrullus lanatus HOM05D008564 ORTHO05D010893 2.5e-17 93.2 179 39.7
Thecc.05G004400 Theobroma cacao HOM05D008564 ORTHO05D010893 4.2e-17 92.4 188 36.7
Hma1.2p1_1857F.1_g305470 Hydrangea macrophylla HOM05D008564 ORTHO05D010893 5.5e-17 92.0 162 43.2
CsaV3_3G033290 Cucumis sativus L. HOM05D008564 ORTHO05D010893 9.5e-17 91.3 179 39.7
Haze_21133 Corylus avellana HOM05D008564 ORTHO05D010893 1.2e-16 90.9 119 47.1
Haze_21136 Corylus avellana HOM05D008564 ORTHO05D010893 1.2e-16 90.9 119 47.1
Potri.016G129400 Populus trichocarpa HOM05D008564 ORTHO05D010893 1.2e-16 90.9 187 36.4
Atru.chr8.2355 Acer truncatum HOM05D008564 ORTHO05D010893 4.4e-14 82.4 127 46.5
Nitab4.5_0000047g0100 Nicotiana tabacum HOM05D008564 ORTHO05D010893 7.5e-14 81.6 177 32.8
Nitab4.5_0008225g0010 Nicotiana tabacum HOM05D008564 ORTHO05D010893 9.8e-14 81.3 179 34.1
Medtr7g071570 Medicago truncatula HOM05D018045 ORTHO05D010893 2.2e-13 80.1 123 40.7
Peaxi162Scf00744g00222 Petunia axillaris HOM05D008564 ORTHO05D010893 1.4e-12 77.4 170 32.4
COL.COLO4_14432 Corchorus olitorius HOM05D008564 ORTHO05D010893 9.2e-12 74.7 136 38.2
ATR0594G141 Amborella trichopoda HOM05D008564 ORTHO05D010893 5.0e-10 68.9 124 37.1
Solyc09g014950.2 Solanum lycopersicum HOM05D008564 ORTHO05D010893 8.6e-10 68.2 166 31.9
Glyma.18G209300 Glycine max HOM05D018045 ORTHO05D010893 1.2e-06 57.8 120 30.8
Glyma.09G279701 Glycine max HOM05D018045 ORTHO05D010893 4.4e-06 55.8 115 35.7
Psat0s1482g0160 Pisum sativum HOM05D018045 ORTHO05D010893 9.8e-06 54.7 127 32.3


User provided reference genes

Program Settings