Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0460471 Rosa chinensis HOM05D007752 ORTHO05D009994 1.9e-135 486.9 510 100.0
FvH4_6g09870 Fragaria vesca HOM05D007752 ORTHO05D009994 2.1e-105 387.1 510 91.0
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.8e-93 347.4 485 91.3
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 7.9e-89 332.0 414 89.6
FAN02G1651 Fragaria x ananassa HOM05D007752 ORTHO05D009994 5.7e-79 299.3 186 82.3
Prupe.6G293600 Prunus persica HOM05D007752 ORTHO05D009994 1.5e-63 248.1 517 69.6
MD04G1174700 Malus domestica HOM05D007752 ORTHO05D009994 4.8e-62 243.0 505 76.4
QL07p032115 Quercus lobata HOM05D007752 ORTHO05D009994 3.3e-42 177.2 449 68.2
CSS0006720 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 7.0e-37 159.5 446 63.0
CSS0000350 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 2.1e-28 131.3 460 59.3
CiPaw.10G164800 Carya illinoinensis HOM05D007752 ORTHO05D009994 1.3e-27 128.6 364 58.2
Thecc.04G151600 Theobroma cacao HOM05D007752 ORTHO05D009994 1.2e-25 122.1 442 61.8
Gohir.A02G003300 Gossypium hirsutum HOM05D007752 ORTHO05D009994 2.3e-24 117.9 364 70.3
Rhsim04G0121800 Rhododendron simsii HOM05D007752 ORTHO05D009994 4.0e-24 117.1 447 57.9
Haze_21175 Corylus avellana HOM05D007752 ORTHO05D009994 8.9e-24 115.9 444 61.0
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 1.5e-23 115.2 400 61.2
Potri.016G136700 Populus trichocarpa HOM05D007752 ORTHO05D009994 5.8e-23 113.2 383 68.4
Lj1g0026088 Lotus japonicus HOM05D007752 ORTHO05D009994 2.9e-22 110.9 432 59.3
PGR031G1793 Punica granatum HOM05D007752 ORTHO05D009994 6.4e-22 109.8 449 62.1
Dinv16979 Davidia involucrata HOM05D007752 ORTHO05D009994 8.3e-22 109.4 186 40.3
CANSAT35G0798 Cannabis sativa HOM05D007752 ORTHO05D009994 1.1e-21 109.0 466 54.3
Duzib151G0981 Durio zibethinus HOM05D007752 ORTHO05D009994 1.1e-21 109.0 360 71.7
Hma1.2p1_0174F.1_g076820 Hydrangea macrophylla HOM05D007752 ORTHO05D009994 1.2e-20 105.5 115 53.0
Sabra04G0153400 Salix brachista HOM05D007752 ORTHO05D009994 2.1e-20 104.8 372 63.7
Medtr7g073260 Medicago truncatula HOM05D007752 ORTHO05D009994 3.5e-20 104.0 371 69.0
Cfa017034 Carpinus fangiana HOM05D007752 ORTHO05D009994 6.0e-20 103.2 95 55.8
TWI77G0759 Tripterygium wilfordii HOM05D007752 ORTHO05D009994 1.3e-19 102.1 375 67.5
VMungo1383G3403 Vigna mungo HOM05D007752 ORTHO05D009994 3.0e-19 100.9 110 47.3
Phvul.008G082800 Phaseolus vulgaris HOM05D007752 ORTHO05D009994 8.6e-19 99.4 176 35.8
TPR.G14113 Trifolium pratense HOM05D007752 ORTHO05D009994 8.6e-19 99.4 130 40.0
Glyma.09G274800 Glycine max HOM05D007752 ORTHO05D009994 4.3e-18 97.1 185 36.2
Psat3g118880 Pisum sativum HOM05D007752 ORTHO05D009994 1.2e-17 95.5 120 41.7
Gorai.005G004200 Gossypium raimondii HOM05D007752 ORTHO05D009994 6.2e-17 93.2 86 47.7
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 1.1e-16 92.4 95 48.4
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 1.8e-16 91.7 101 51.5
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 4.0e-16 90.5 101 47.5
Nitab4.5_0004433g0030 Nicotiana tabacum HOM05D007752 ORTHO05D009994 4.0e-16 90.5 102 46.1
Aqoxy4G02425 Aquilegia oxysepala HOM05D007752 ORTHO05D009994 5.2e-16 90.1 100 49.0
Ciclev10013314m.g Citrus clementina HOM05D007752 ORTHO05D009994 5.2e-16 90.1 110 43.6
AUR62006417 Chenopodium quinoa HOM05D007752 ORTHO05D000248 8.9e-16 89.4 96 51.0
Lj3P941T40 Lonicera japonica HOM05D007752 ORTHO05D009994 1.2e-15 89.0 87 48.3
MBI03_g22789_MAGBIO Magnolia biondii HOM05D007752 ORTHO05D009994 7.6e-15 86.3 104 45.2
ClCG10G022730 Citrullus lanatus HOM05D007752 ORTHO05D009994 2.2e-14 84.7 85 47.1
Sed0005875 Sechium edule HOM05D007752 ORTHO05D009994 8.4e-14 82.8 79 50.6
Eucgr.A00738 Eucalyptus grandis HOM05D007752 ORTHO05D009994 1.1e-13 82.4 83 44.6
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 1.1e-13 82.4 97 47.4
MELO3C009103.2 Cucumis melo HOM05D007752 ORTHO05D009994 2.4e-13 81.3 79 46.8
Ah.08g209310 Amaranthus hybridus HOM05D007752 ORTHO05D009994 5.4e-13 80.1 109 42.2
Cpa.g.sc86.57 Carica papaya HOM05D007752 ORTHO05D009994 5.4e-13 80.1 87 43.7
Ca_07763_v3 Cicer arietinum L. HOM05D007752 ORTHO05D009994 5.4e-13 80.1 87 47.1
Nn2g10299 Nelumbo nucifera HOM05D007752 ORTHO05D009994 7.1e-13 79.7 85 50.6
Migut.J00038 Erythranthe guttata HOM05D007752 ORTHO05D009994 2.7e-12 77.8 118 39.8
PSO017G1004 Papaver somniferum HOM05D007752 ORTHO05D009994 2.7e-12 77.8 159 32.1
Sc20g0006950 Simmondsia chinensis HOM05D007752 ORTHO05D009994 2.7e-12 77.8 87 39.1
Peaxi162Scf00141g00093 Petunia axillaris HOM05D007752 ORTHO05D009994 4.6e-12 77.0 356 68.5
VMungo0720G0765 Vigna mungo HOM05D007752 ORTHO05D009994 4.6e-12 77.0 75 52.0
PSO170G5102 Papaver somniferum HOM05D007752 ORTHO05D009994 1.0e-11 75.9 188 29.8
Lsat_1_v5_gn_5_152320 Lactuca sativa HOM05D007752 ORTHO05D009994 2.3e-11 74.7 74 50.0
Gohir.D02G003700 Gossypium hirsutum HOM05D007752 ORTHO05D009994 3.9e-11 73.9 89 43.8
Sc20g0006960 Simmondsia chinensis HOM05D007752 ORTHO05D009994 9.6e-10 69.3 121 34.7
TAR633G0335 Trochodendron aralioides HOM05D007752 ORTHO05D009994 9.6e-10 69.3 72 47.2
SalBow8G2716 Salvia bowleyana HOM05D007752 ORTHO05D009994 3.6e-09 67.4 88 40.9
Zm00001eb016080 Zea mays HOM05D007752 ORTHO05D009994 8.1e-09 66.2 121 32.2
HPP92_024978 Vanilla planifolia HOM05D007752 ORTHO05D009994 1.1e-08 65.9 92 39.1
HanXRQChr01g0000111 Helianthus annuus HOM05D007752 ORTHO05D009994 1.8e-08 65.1 74 44.6
Solyc09g042250.2 Solanum lycopersicum HOM05D007752 ORTHO05D009994 3.1e-08 64.3 76 43.4
Sopen09g015390 Solanum pennellii HOM05D007752 ORTHO05D009994 3.1e-08 64.3 76 43.4
VMungo0251G1651 Vigna mungo HOM05D007752 ORTHO05D009994 5.3e-08 63.5 62 48.4
Actinidia29032 Actinidia chinensis HOM05D007752 ORTHO05D009994 1.2e-07 62.4 70 45.7
CDE06G1380 Ceratophyllum demersum HOM05D007752 ORTHO05D009994 1.2e-07 62.4 83 34.9
Manes.08G171200 Manihot esculenta HOM05D007752 ORTHO05D009994 2.6e-07 61.2 54 59.3
Eucgr.A00736 Eucalyptus grandis HOM05D007752 ORTHO05D009994 5.8e-07 60.1 56 50.0
CDE04G1037 Ceratophyllum demersum HOM05D007752 ORTHO05D009994 9.9e-07 59.3 74 40.5
CDE04G0575 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 1.3e-06 58.9 108 28.7
SalBow1G4712 Salvia bowleyana HOM05D007752 ORTHO05D009994 1.3e-06 58.9 84 38.1
SGA_v2.0_scaffold85G26614 Striga asiatica HOM05D007752 ORTHO05D009994 1.7e-06 58.5 67 40.3
SalBow1G2062 Salvia bowleyana HOM05D007752 ORTHO05D009994 2.2e-06 58.2 102 33.3


User provided reference genes

Program Settings