Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0459261 Rosa chinensis HOM05D000166 ORTHO05D000812 2.1e-25 118.2 59 100.0
RcHm_v2.0_Chr5g0042311 Rosa chinensis HOM05D000166 ORTHO05D000812 2.6e-12 74.7 53 64.2
Eucgr.A00887 Eucalyptus grandis HOM05D000166 ORTHO05D000812 1.7e-11 72.0 49 67.3
ClCG02G000020 Citrullus lanatus HOM05D000166 ORTHO05D000812 8.5e-11 69.7 50 66.0
Glyma.15G124900 Glycine max HOM05D000166 ORTHO05D000812 6.1e-09 63.5 77 46.8
Glyma.09G018800 Glycine max HOM05D000166 ORTHO05D000812 1.4e-08 62.4 77 46.8
FAN02G2279 Fragaria x ananassa HOM05D000166 ORTHO05D000812 2.3e-08 61.6 77 49.4
FAN05G2974 Fragaria x ananassa HOM05D000166 ORTHO05D000812 3.0e-08 61.2 77 50.6
SEGI_40994 Sequoiadendron giganteum HOM05D000166 ORTHO05D000812 3.0e-08 61.2 53 50.9
HanXRQChr04g0101751 Helianthus annuus HOM05D000166 ORTHO05D000812 3.9e-08 60.8 47 59.6
Zm00001eb138310 Zea mays HOM05D000166 ORTHO05D000812 5.1e-08 60.5 78 44.9
FvH4_6g09001 Fragaria vesca HOM05D000166 ORTHO05D000812 6.7e-08 60.1 77 49.4
FAN14G3482 Fragaria x ananassa HOM05D000166 ORTHO05D000812 6.7e-08 60.1 77 49.4
Cc06_g22310 Coffea canephora HOM05D000166 ORTHO05D000812 8.8e-08 59.7 75 46.7
BraA02t07300Z Brassica rapa HOM05D000166 ORTHO05D000812 1.5e-07 58.9 96 40.6
MD04G1181800 Malus domestica HOM05D000166 ORTHO05D000812 1.5e-07 58.9 77 44.2
Lj2A52G84 Lonicera japonica HOM05D000166 ORTHO05D000812 2.0e-07 58.5 46 56.5
Ca_11364_v3 Cicer arietinum L. HOM05D000166 ORTHO05D000812 2.6e-07 58.2 77 45.5
Hund15334 Selenicereus undatus HOM05D000166 ORTHO05D000812 2.6e-07 58.2 77 42.9
Migut.F01832 Erythranthe guttata HOM05D000166 ORTHO05D000812 9.7e-07 56.2 77 44.2
PSO017G4695 Papaver somniferum HOM05D000166 ORTHO05D000812 9.7e-07 56.2 77 41.6
AT5G49760 Arabidopsis thaliana HOM05D000166 ORTHO05D000812 1.3e-06 55.8 56 51.8
TAR624G1112 Trochodendron aralioides HOM05D000166 ORTHO05D000812 1.3e-06 55.8 56 51.8
GSVIVG01023113001 Vitis vinifera HOM05D000166 ORTHO05D000812 1.3e-06 55.8 51 54.9
FvH4_6g08970 Fragaria vesca HOM05D000166 ORTHO05D000812 1.7e-06 55.5 77 46.8
FAN14G5745 Fragaria x ananassa HOM05D000166 ORTHO05D000812 1.7e-06 55.5 77 46.8
arahy.Tifrunner.gnm1.ann1.J78N5P Arachis hypogaea HOM05D000166 ORTHO05D013215 2.2e-06 55.1 53 56.6
PSO170G0490 Papaver somniferum HOM05D000166 ORTHO05D000812 2.2e-06 55.1 77 40.3
SEGI_29179 Sequoiadendron giganteum HOM05D000166 ORTHO05D000812 2.2e-06 55.1 55 49.1
Lalb_Chr15g0089591 Lupinus albus HOM05D000166 ORTHO05D000812 3.7e-06 54.3 77 41.6
Prupe.6G301700 Prunus persica HOM05D000166 ORTHO05D000812 3.7e-06 54.3 77 42.9
Manes.09G119200 Manihot esculenta HOM05D000166 ORTHO05D000812 6.3e-06 53.5 77 42.9
Peaxi162Scf00194g00931 Petunia axillaris HOM05D000166 ORTHO05D000812 8.2e-06 53.1 50 50.0
Hund15702 Selenicereus undatus HOM05D000166 ORTHO05D000812 8.2e-06 53.1 71 45.1


User provided reference genes

Program Settings