Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr3g0455291 Rosa chinensis HOM05D001091 ORTHO05D050724 1.0e-27 125.9 62 100.0
RcHm_v2.0_Chr3g0478841 Rosa chinensis HOM05D001091 ORTHO05D050724 2.1e-12 75.1 45 75.6
RcHm_v2.0_Chr5g0049121 Rosa chinensis HOM05D001091 ORTHO05D001020 3.6e-12 74.3 36 88.9
FAN16G2369 Fragaria x ananassa HOM05D001091 ORTHO05D001020 1.3e-09 65.9 37 81.1
FAN21G3893 Fragaria x ananassa HOM05D001091 ORTHO05D001020 1.3e-09 65.9 37 81.1
FAN25G1894 Fragaria x ananassa HOM05D001091 ORTHO05D001020 1.3e-09 65.9 37 81.1
FvH4_3g26140 Fragaria vesca HOM05D001091 ORTHO05D001020 1.7e-09 65.5 37 78.4
FAN11G0955 Fragaria x ananassa HOM05D001091 ORTHO05D001020 1.7e-09 65.5 37 78.4
Prupe.6G147300 Prunus persica HOM05D001091 ORTHO05D001020 1.6e-07 58.9 31 71.0
MD11G1174900 Malus domestica HOM05D001091 ORTHO05D001020 2.1e-07 58.5 30 80.0
MD03G1159600 Malus domestica HOM05D001091 ORTHO05D001020 3.5e-07 57.8 31 71.0
PGR119G1581 Punica granatum HOM05D001091 ORTHO05D001020 4.6e-07 57.4 32 68.8
Sabra16G0128400 Salix brachista HOM05D001091 ORTHO05D001020 6.6e-06 53.5 33 66.7
MELO3C014526.2 Cucumis melo HOM05D001091 ORTHO05D001020 8.6e-06 53.1 36 58.3
Eucgr.J00586 Eucalyptus grandis HOM05D001091 ORTHO05D001020 8.6e-06 53.1 36 55.6


User provided reference genes

Program Settings