Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0176501 Rosa chinensis HOM05D003379 ORTHO05D003862 6.1e-64 247.7 158 100.0
FvH4_6g54290 Fragaria vesca HOM05D003379 ORTHO05D003862 5.9e-35 151.4 139 66.2
FAN14G1380 Fragaria x ananassa HOM05D003379 ORTHO05D003862 5.9e-35 151.4 139 66.2
FAN09G0861 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.3e-34 150.2 139 63.3
FAN05G5138 Fragaria x ananassa HOM05D003379 ORTHO05D003862 5.0e-34 148.3 139 63.3
COL.COLO4_13374 Corchorus olitorius HOM05D003379 ORTHO05D003862 1.2e-19 100.5 143 55.9
Cfa007165 Carpinus fangiana HOM05D003379 ORTHO05D003862 3.0e-18 95.9 145 56.6
Manes.11G076800 Manihot esculenta HOM05D003379 ORTHO05D003862 8.6e-18 94.4 151 43.7
Prupe.3G313500 Prunus persica HOM05D003379 ORTHO05D003862 1.6e-16 90.1 142 54.9
MD17G1006900 Malus domestica HOM05D003379 ORTHO05D003862 2.1e-16 89.7 142 54.2
TWI32G0366 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 2.1e-16 89.7 145 40.0
Atru.chr6.2693 Acer truncatum HOM05D003379 ORTHO05D003862 2.8e-16 89.4 147 41.5
DCAR_002970 Daucus carota HOM05D003379 ORTHO05D003862 2.8e-16 89.4 143 53.1
Duzib187G1855 Durio zibethinus HOM05D003379 ORTHO05D003862 3.6e-16 89.0 142 49.3
Dinv25618 Davidia involucrata HOM05D003379 ORTHO05D003862 8.1e-16 87.8 164 43.3
MD09G1002700 Malus domestica HOM05D003379 ORTHO05D003862 1.4e-15 87.0 141 60.3
CiPaw.04G001500 Carya illinoinensis HOM05D003379 ORTHO05D003862 1.8e-15 86.7 145 41.4
Potri.002G238100 Populus trichocarpa HOM05D003379 ORTHO05D003862 3.1e-15 85.9 149 39.6
Thecc.04G047800 Theobroma cacao HOM05D003379 ORTHO05D003862 3.1e-15 85.9 145 53.8
FvH4_6g20211 Fragaria vesca HOM05D003379 ORTHO05D003862 5.2e-15 85.1 137 42.3
Gohir.D07G239900 Gossypium hirsutum HOM05D003379 ORTHO05D003862 6.8e-15 84.7 150 54.0
FAN05G5404 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.2e-14 84.0 137 43.1
PGR142G1656 Punica granatum HOM05D003379 ORTHO05D003862 1.2e-14 84.0 143 39.2
Haze_14949 Corylus avellana HOM05D003379 ORTHO05D003862 1.5e-14 83.6 147 51.0
FAN05G4320 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.5e-14 83.6 137 43.1
Potri.014G143800 Populus trichocarpa HOM05D003379 ORTHO05D003862 2.0e-14 83.2 145 40.7
Ciclev10015333m.g Citrus clementina HOM05D003379 ORTHO05D003862 2.6e-14 82.8 143 37.8
Gorai.001G276100 Gossypium raimondii HOM05D003379 ORTHO05D003862 5.8e-14 81.6 148 54.1
Lj7A617T72 Lonicera japonica HOM05D003379 ORTHO05D003862 5.8e-14 81.6 153 46.4
CANSAT64G2275 Cannabis sativa HOM05D003379 ORTHO05D003862 7.5e-14 81.3 143 44.1
Cpa.g.sc70.68 Carica papaya HOM05D003379 ORTHO05D003862 7.5e-14 81.3 148 46.6
Sabra02G0181500 Salix brachista HOM05D003379 ORTHO05D003862 2.9e-13 79.3 147 37.4
Gohir.A07G232700 Gossypium hirsutum HOM05D003379 ORTHO05D003862 3.7e-13 79.0 148 52.0
Aqoxy6G00186 Aquilegia oxysepala HOM05D003379 ORTHO05D003862 6.4e-13 78.2 164 43.3
MELO3C014781.2 Cucumis melo HOM05D003379 ORTHO05D003862 6.4e-13 78.2 152 35.5
Rhsim08G0039200 Rhododendron simsii HOM05D003379 ORTHO05D003862 6.4e-13 78.2 168 41.7
RcHm_v2.0_Chr3g0475791 Rosa chinensis HOM05D003379 ORTHO05D003862 1.9e-12 76.6 137 40.1
QL02p069539 Quercus lobata HOM05D003379 ORTHO05D003862 5.4e-12 75.1 153 41.2
Duzib147G0361 Durio zibethinus HOM05D003379 ORTHO05D003862 9.2e-12 74.3 144 38.2
Sed0002814 Sechium edule HOM05D003379 ORTHO05D003862 1.2e-11 73.9 145 34.5
Nn4g22138 Nelumbo nucifera HOM05D003379 ORTHO05D003862 1.6e-11 73.6 148 34.5
Sed0021165 Sechium edule HOM05D003379 ORTHO05D003862 4.6e-11 72.0 151 33.1
HanXRQChr17g0550921 Helianthus annuus HOM05D003379 ORTHO05D003862 6.0e-11 71.6 154 39.0
FAN14G0132 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.0e-10 70.9 153 36.6
TAR374G0325 Trochodendron aralioides HOM05D003379 ORTHO05D003862 5.1e-10 68.6 152 31.6
CsaV3_3G027780 Cucumis sativus L. HOM05D003379 ORTHO05D003862 6.6e-10 68.2 153 32.7
Sp6g30030 Schrenkiella parvula HOM05D003379 ORTHO05D003862 1.5e-09 67.0 139 36.0
MBI07_g41898_MAGBIO Magnolia biondii HOM05D003379 ORTHO05D003862 1.9e-09 66.6 151 42.4
TAR475G0001 Trochodendron aralioides HOM05D003379 ORTHO05D003862 1.9e-09 66.6 139 34.5
vmacro18379 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 2.5e-09 66.2 156 41.0
BolC9t59151H Brassica oleracea HOM05D003379 ORTHO05D003862 3.3e-09 65.9 139 32.4
C09p63160 Brassica napus HOM05D003379 ORTHO05D003862 4.3e-09 65.5 139 32.4
CARHR199410 Cardamine hirsuta HOM05D003379 ORTHO05D003862 5.6e-09 65.1 137 36.5
ClCG05G012630 Citrullus lanatus HOM05D003379 ORTHO05D003862 1.6e-08 63.5 154 31.8
Dinv19304 Davidia involucrata HOM05D003379 ORTHO05D003862 2.1e-08 63.2 142 32.4
CAN.G1061.1 Capsicum annuum HOM05D003379 ORTHO05D003862 3.6e-08 62.4 148 33.8
TWI75G1860 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 3.6e-08 62.4 140 42.1
A10p24430 Brassica napus HOM05D003379 ORTHO05D003862 6.2e-08 61.6 139 30.2
Nitab4.5_0007209g0030 Nicotiana tabacum HOM05D000225 ORTHO05D001595 6.2e-08 61.6 155 34.2
BraA10t44509Z Brassica rapa HOM05D003379 ORTHO05D003862 1.1e-07 60.8 139 30.2
Dinv01473 Davidia involucrata HOM05D003379 ORTHO05D003862 1.8e-07 60.1 142 32.4
Sopen02g036510 Solanum pennellii HOM05D003379 ORTHO05D003862 3.1e-07 59.3 148 36.5
arahy.Tifrunner.gnm1.ann1.M1DIX9 Arachis hypogaea HOM05D003379 ORTHO05D003862 5.2e-07 58.5 142 40.8
Solyc02g091940.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 5.2e-07 58.5 148 36.5
CSS0041611 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 6.8e-07 58.2 152 30.9
Hma1.2p1_0787F.1_g217850 Hydrangea macrophylla HOM05D003379 ORTHO05D003862 6.8e-07 58.2 150 44.0
Carub.0006s1216 Capsella rubella HOM05D003379 ORTHO05D003862 8.9e-07 57.8 137 34.3
Cfa009444 Carpinus fangiana HOM05D003379 ORTHO05D003862 1.2e-06 57.4 139 38.1
CDE05G0540 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 1.2e-06 57.4 139 33.1
Actinidia36245 Actinidia chinensis HOM05D003379 ORTHO05D003862 1.5e-06 57.0 141 48.9
AT5G13970 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 1.5e-06 57.0 141 32.6
PGSC0003DMG400021424 Solanum tuberosum HOM05D003379 ORTHO05D003862 1.5e-06 57.0 148 35.8
CiPaw.06G109000 Carya illinoinensis HOM05D003379 ORTHO05D003862 2.6e-06 56.2 149 30.9
Cc07_g01280 Coffea canephora HOM05D003379 ORTHO05D003862 2.6e-06 56.2 152 32.2
Lsat_1_v5_gn_0_41321 Lactuca sativa HOM05D003379 ORTHO05D003862 2.6e-06 56.2 155 31.6
VMungo1383G3656 Vigna mungo HOM05D003379 ORTHO05D003862 2.6e-06 56.2 139 33.8
Hund23589 Selenicereus undatus HOM05D003379 ORTHO05D003862 3.4e-06 55.8 138 39.1
MSTRG.2062 Avicennia marina HOM05D003379 ORTHO05D003862 4.4e-06 55.5 139 46.8
Manes.09G187602 Manihot esculenta HOM05D003379 ORTHO05D003862 4.4e-06 55.5 140 38.6
Phvul.001G084300 Phaseolus vulgaris HOM05D003379 ORTHO05D003862 5.8e-06 55.1 139 40.3
Nitab4.5_0001409g0240 Nicotiana tabacum HOM05D000225 ORTHO05D001595 7.6e-06 54.7 152 30.9
Thhalv10013725m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 9.9e-06 54.3 140 35.0


User provided reference genes

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