Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0176391 Rosa chinensis HOM05D010918 ORTHO05D010815 1.9e-57 225.7 122 100.0
FAN05G3850 Fragaria x ananassa HOM05D010918 ORTHO05D010815 9.2e-36 153.7 102 83.3
FAN14G2957 Fragaria x ananassa HOM05D000001 ORTHO05D000003 4.6e-27 124.8 91 78.0
Haze_14937 Corylus avellana HOM05D000001 ORTHO05D000003 1.3e-13 80.1 84 63.1
Cfa007173 Carpinus fangiana HOM05D010918 ORTHO05D010815 2.2e-13 79.3 98 57.1
CiPaw.03G003100 Carya illinoinensis HOM05D009379 ORTHO05D010815 4.9e-13 78.2 90 60.0
Thecc.04G045800 Theobroma cacao HOM05D010918 ORTHO05D010815 8.4e-13 77.4 125 50.4
QL02p069882 Quercus lobata HOM05D010918 ORTHO05D010815 1.9e-12 76.3 122 50.8
Manes.04G092250 Manihot esculenta HOM05D009379 ORTHO05D010815 6.0e-11 71.2 118 47.5
Manes.11G077600 Manihot esculenta HOM05D009379 ORTHO05D010815 1.0e-10 70.5 116 44.8
Potri.017G060400 Populus trichocarpa HOM05D010918 ORTHO05D010815 3.9e-10 68.6 94 53.2
MD09G1004200 Malus domestica HOM05D010918 ORTHO05D010815 5.6e-09 64.7 105 50.5
COL.COLO4_13348 Corchorus olitorius HOM05D010918 ORTHO05D010815 7.4e-09 64.3 100 54.0
Duzib147G1198 Durio zibethinus HOM05D010918 ORTHO05D010815 2.1e-08 62.8 95 49.5
Sabra17G0054200 Salix brachista HOM05D001116 ORTHO05D001028 4.8e-08 61.6 115 45.2
Gohir.A10G071200 Gossypium hirsutum HOM05D010918 ORTHO05D010815 1.8e-07 59.7 118 43.2
TAR371G1162 Trochodendron aralioides HOM05D010918 ORTHO05D010815 3.1e-07 58.9 114 44.7
CANSAT64G1478 Cannabis sativa HOM05D010918 ORTHO05D010815 9.0e-07 57.4 110 46.4
Gorai.011G087000 Gossypium raimondii HOM05D010918 ORTHO05D010815 9.0e-07 57.4 118 41.5
Rhsim10G0001800 Rhododendron simsii HOM05D000001 ORTHO05D000003 9.0e-07 57.4 103 41.7
Gohir.D10G079900 Gossypium hirsutum HOM05D010918 ORTHO05D010815 1.2e-06 57.0 118 41.5
Cpa.g.sc70.79 Carica papaya HOM05D010918 ORTHO05D010815 2.0e-06 56.2 80 53.8
Glyma.16G049700 Glycine max HOM05D009379 ORTHO05D010815 2.0e-06 56.2 104 48.1
Lalb_Chr24g0403191 Lupinus albus HOM05D009379 ORTHO05D010815 2.6e-06 55.8 101 45.5
THA.LOC104805305 Tarenaya hassleriana HOM05D009379 ORTHO05D010815 4.5e-06 55.1 59 59.3


User provided reference genes

Program Settings