Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0175871 Rosa chinensis HOM05D007835 ORTHO05D008482 1.2e-60 236.5 139 100.0
FAN02G2327 Fragaria x ananassa HOM05D007835 ORTHO05D008482 2.9e-49 198.7 140 83.6
FvH4_6g53750 Fragaria vesca HOM05D007835 ORTHO05D008482 8.3e-49 197.2 141 83.7
FAN05G3731 Fragaria x ananassa HOM05D007835 ORTHO05D008482 8.3e-49 197.2 141 83.7
FAN14G4618 Fragaria x ananassa HOM05D007835 ORTHO05D008482 8.3e-49 197.2 141 83.7
FAN09G2005 Fragaria x ananassa HOM05D007835 ORTHO05D008482 2.7e-47 192.2 137 83.2
Manes.17G102100 Manihot esculenta HOM05D007835 ORTHO05D008482 2.7e-23 112.5 139 51.1
Prupe.3G308000 Prunus persica HOM05D007835 ORTHO05D008482 2.7e-23 112.5 142 55.6
Atru.chr6.2588 Acer truncatum HOM05D007835 ORTHO05D008482 3.9e-22 108.6 143 49.7
QL02p071044 Quercus lobata HOM05D007835 ORTHO05D008482 1.1e-21 107.1 139 50.4
GSVIVG01033066001 Vitis vinifera HOM05D007835 ORTHO05D008482 2.1e-20 102.8 139 51.1
CiPaw.03G057300 Carya illinoinensis HOM05D007835 ORTHO05D008482 3.6e-20 102.1 138 50.0
Duzib147G1374 Durio zibethinus HOM05D007835 ORTHO05D008482 1.1e-19 100.5 140 50.0
CiPaw.04G038800 Carya illinoinensis HOM05D007835 ORTHO05D008482 2.4e-19 99.4 143 51.0
Thecc.04G039400 Theobroma cacao HOM05D007835 ORTHO05D008482 5.2e-19 98.2 138 50.0
Ciclev10017736m.g Citrus clementina HOM05D007835 ORTHO05D008482 6.8e-19 97.8 141 45.4
Gohir.1Z049371 Gossypium hirsutum HOM05D007835 ORTHO05D008482 2.6e-18 95.9 140 47.9
Gohir.A09G036865 Gossypium hirsutum HOM05D007835 ORTHO05D008482 2.6e-18 95.9 140 47.9
Gohir.A09G036900 Gossypium hirsutum HOM05D007835 ORTHO05D008482 2.6e-18 95.9 140 47.9
Gorai.006G043500 Gossypium raimondii HOM05D007835 ORTHO05D008482 5.8e-18 94.7 140 47.1
Gohir.A05G337200 Gossypium hirsutum HOM05D007835 ORTHO05D008482 7.6e-18 94.4 140 47.9
Potri.017G065916 Populus trichocarpa HOM05D007835 ORTHO05D008482 7.6e-18 94.4 135 47.4
Potri.001G328300 Populus trichocarpa HOM05D007835 ORTHO05D008482 1.3e-17 93.6 139 47.5
Gohir.D09G038100 Gossypium hirsutum HOM05D007835 ORTHO05D008482 1.7e-17 93.2 140 46.4
COL.COLO4_13280 Corchorus olitorius HOM05D007835 ORTHO05D008482 1.1e-16 90.5 139 46.8
Gorai.012G085600 Gossypium raimondii HOM05D007835 ORTHO05D008482 1.1e-16 90.5 137 47.4
CANSAT64G0845 Cannabis sativa HOM05D007835 ORTHO05D008482 1.4e-16 90.1 146 51.4
Gohir.D07G237000 Gossypium hirsutum HOM05D007835 ORTHO05D008482 1.9e-16 89.7 138 44.2
Gorai.001G272900 Gossypium raimondii HOM05D007835 ORTHO05D008482 1.9e-16 89.7 138 44.2
Gohir.D04G075900 Gossypium hirsutum HOM05D007835 ORTHO05D008482 3.2e-16 89.0 137 46.7
Gohir.A07G229800 Gossypium hirsutum HOM05D007835 ORTHO05D008482 4.2e-16 88.6 138 44.2
Cfa007213 Carpinus fangiana HOM05D007835 ORTHO05D008482 5.4e-16 88.2 140 41.4
Sabra17G0058300 Salix brachista HOM05D007835 ORTHO05D008482 4.6e-15 85.1 135 43.7
Sabra16G0210200 Salix brachista HOM05D007835 ORTHO05D008482 3.0e-14 82.4 139 43.2
Dinv33326 Davidia involucrata HOM05D007835 ORTHO05D008482 1.9e-13 79.7 139 41.0
PGR142G0702 Punica granatum HOM05D007835 ORTHO05D008482 2.8e-12 75.9 140 41.4
Actinidia05895 Actinidia chinensis HOM05D007835 ORTHO05D008482 3.6e-12 75.5 136 39.7
Lj1g0016807 Lotus japonicus HOM05D007835 ORTHO05D008482 2.4e-11 72.8 139 36.0
QL08p045526 Quercus lobata HOM05D007835 ORTHO05D008482 3.1e-11 72.4 133 39.8
Eucgr.I01635 Eucalyptus grandis HOM05D007835 ORTHO05D008482 1.2e-10 70.5 142 39.4
Haze_14890 Corylus avellana HOM05D007835 ORTHO05D008482 2.0e-10 69.7 99 43.4
TWI34G1201 Tripterygium wilfordii HOM05D007835 ORTHO05D008482 3.4e-10 68.9 141 45.4
TWI60G0136 Tripterygium wilfordii HOM05D007835 ORTHO05D008482 3.4e-10 68.9 141 43.3
Lalb_Chr00c01g0403701 Lupinus albus HOM05D007835 ORTHO05D008482 4.4e-10 68.6 138 38.4
TAR374G0487 Trochodendron aralioides HOM05D007835 ORTHO05D008482 1.7e-09 66.6 143 39.2
Aqoxy5G03319 Aquilegia oxysepala HOM05D007835 ORTHO05D008482 6.4e-09 64.7 138 38.4
AUR62003426 Chenopodium quinoa HOM05D007835 ORTHO05D008482 1.9e-08 63.2 138 32.6
Medtr7g028780 Medicago truncatula HOM05D007835 ORTHO05D008482 2.4e-08 62.8 138 34.1
Eucgr.I01634 Eucalyptus grandis HOM05D007835 ORTHO05D008482 7.1e-08 61.2 140 37.9
Actinidia36209 Actinidia chinensis HOM05D007835 ORTHO05D008482 1.2e-07 60.5 132 35.6
TAR629G3113 Trochodendron aralioides HOM05D007835 ORTHO05D008482 2.7e-07 59.3 137 39.4
DCAR_021801 Daucus carota HOM05D007835 ORTHO05D008482 3.5e-07 58.9 142 36.6
Peaxi162Scf00420g00521 Petunia axillaris HOM05D011578 ORTHO05D008482 7.9e-07 57.8 181 32.0
TPR.G29071 Trifolium pratense HOM05D000032 ORTHO05D008482 1.3e-06 57.0 127 35.4
TAR371G0995 Trochodendron aralioides HOM05D007835 ORTHO05D008482 1.3e-06 57.0 136 38.2
AUR62029415 Chenopodium quinoa HOM05D007835 ORTHO05D008482 2.3e-06 56.2 131 33.6
arahy.Tifrunner.gnm1.ann1.TA4SKR Arachis hypogaea HOM05D007835 ORTHO05D008482 3.0e-06 55.8 140 39.3
arahy.Tifrunner.gnm1.ann1.S4RYGS Arachis hypogaea HOM05D007835 ORTHO05D008482 5.1e-06 55.1 140 39.3
Oeu048907.1 Olea europaea HOM05D007835 ORTHO05D008482 5.1e-06 55.1 154 30.5
Nn3g16421 Nelumbo nucifera HOM05D007835 ORTHO05D008482 6.6e-06 54.7 140 33.6


User provided reference genes

Program Settings