Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0175131 Rosa chinensis HOM05D022506 ORTHO05D014646 9.3e-77 290.0 137 100.0
RcHm_v2.0_Chr4g0408361 Rosa chinensis HOM05D022506 ORTHO05D014646 9.4e-29 130.6 76 84.2
RcHm_v2.0_Chr5g0051811 Rosa chinensis HOM05D022506 ORTHO05D014646 6.7e-27 124.4 70 85.7
FAN26G0468 Fragaria x ananassa HOM05D020883 ORTHO05D014646 4.1e-24 115.2 113 54.0
RcHm_v2.0_Chr4g0441561 Rosa chinensis HOM05D022506 ORTHO05D014646 2.0e-23 112.8 76 77.6
FAN06G3203 Fragaria x ananassa HOM05D020883 ORTHO05D014646 1.3e-22 110.2 104 54.8
FAN21G3125 Fragaria x ananassa HOM05D022103 ORTHO05D014646 1.3e-22 110.2 80 63.8
FAN18G3568 Fragaria x ananassa HOM05D022103 ORTHO05D014646 1.4e-16 90.1 135 41.5
FAN04G2610 Fragaria x ananassa HOM05D022103 ORTHO05D014646 3.4e-10 68.9 135 34.8
FAN10G2102 Fragaria x ananassa HOM05D022103 ORTHO05D014646 1.7e-09 66.6 54 57.4
FAN04G2485 Fragaria x ananassa HOM05D020883 ORTHO05D014646 5.4e-08 61.6 58 53.4
FAN06G2557 Fragaria x ananassa HOM05D020883 ORTHO05D014646 5.4e-08 61.6 58 53.4
MD16G1140000 Malus domestica HOM05D022506 ORTHO05D014646 2.7e-07 59.3 81 42.0
FAN23G2345 Fragaria x ananassa HOM05D020883 ORTHO05D209421 6.6e-06 54.7 105 35.2


User provided reference genes

Program Settings