Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0173411 Rosa chinensis HOM05D007616 ORTHO05D008751 5.6e-128 461.1 254 100.0
FAN14G2995 Fragaria x ananassa HOM05D007616 ORTHO05D008751 1.4e-107 393.3 255 83.5
FvH4_6g51930 Fragaria vesca HOM05D007616 ORTHO05D008751 2.7e-106 389.0 255 83.1
FAN09G2205 Fragaria x ananassa HOM05D007616 ORTHO05D008751 2.7e-106 389.0 255 83.1
Prupe.1G577200 Prunus persica HOM05D007616 ORTHO05D008751 1.6e-53 213.8 268 54.1
MD08G1240500 Malus domestica HOM05D007616 ORTHO05D008751 1.9e-51 206.8 258 52.7
COL.COLO4_17740 Corchorus olitorius HOM05D007616 ORTHO05D008751 1.1e-46 191.0 258 54.7
Gohir.A01G182700 Gossypium hirsutum HOM05D007616 ORTHO05D008751 1.1e-46 191.0 254 52.0
MD15G1433700 Malus domestica HOM05D007616 ORTHO05D008751 1.9e-46 190.3 274 49.3
Thecc.02G023400 Theobroma cacao HOM05D007616 ORTHO05D008751 3.2e-46 189.5 259 50.6
Gohir.D01G173800 Gossypium hirsutum HOM05D007616 ORTHO05D008751 4.1e-46 189.1 255 52.5
Gorai.002G215900 Gossypium raimondii HOM05D007616 ORTHO05D008751 4.1e-46 189.1 255 52.5
Potri.004G222800 Populus trichocarpa HOM05D007616 ORTHO05D008751 2.7e-45 186.4 255 49.8
Peaxi162Scf00011g00934 Petunia axillaris HOM05D007616 ORTHO05D008751 6.0e-45 185.3 253 47.4
Eucgr.I02753 Eucalyptus grandis HOM05D007616 ORTHO05D008751 8.6e-44 181.4 259 51.4
Potri.003G009400 Populus trichocarpa HOM05D007616 ORTHO05D008751 5.6e-43 178.7 254 48.8
Duzib132G0975 Durio zibethinus HOM05D007616 ORTHO05D008751 7.3e-43 178.3 256 50.0
QL02p100178 Quercus lobata HOM05D007616 ORTHO05D008751 5.2e-41 172.2 271 45.4
Nitab4.5_0002596g0080 Nicotiana tabacum HOM05D007616 ORTHO05D008751 5.8e-40 168.7 252 44.8
PGSC0003DMG400024897 Solanum tuberosum HOM05D007616 ORTHO05D008751 9.8e-40 167.9 245 46.5
CiPaw.06G173100 Carya illinoinensis HOM05D007616 ORTHO05D008751 6.4e-39 165.2 225 53.8
Solyc01g103700.3 Solanum lycopersicum HOM05D007616 ORTHO05D008751 6.4e-39 165.2 242 45.9
Sopen01g046110 Solanum pennellii HOM05D007616 ORTHO05D008751 1.9e-38 163.7 240 48.3
Manes.10G119800 Manihot esculenta HOM05D007616 ORTHO05D008751 4.1e-38 162.5 237 46.0
CiPaw.05G005800 Carya illinoinensis HOM05D007616 ORTHO05D008751 7.1e-38 161.8 227 50.2
Atru.chr4.2705 Acer truncatum HOM05D007616 ORTHO05D008751 2.1e-37 160.2 248 47.2
Nitab4.5_0000948g0040 Nicotiana tabacum HOM05D007616 ORTHO05D008751 3.5e-37 159.5 267 43.1
Oeu000131.1 Olea europaea HOM05D007616 ORTHO05D008751 1.0e-36 157.9 242 45.9
DCAR_025356 Daucus carota HOM05D007616 ORTHO05D008751 3.0e-36 156.4 247 44.1
Duzib248G0210 Durio zibethinus HOM05D007616 ORTHO05D008751 6.6e-36 155.2 236 50.0
CSS0021835 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 1.5e-35 154.1 242 42.1
Sed0008181 Sechium edule HOM05D007616 ORTHO05D008751 1.9e-35 153.7 221 54.3
arahy.Tifrunner.gnm1.ann1.D7HVAZ Arachis hypogaea HOM05D007616 ORTHO05D008751 4.3e-35 152.5 240 45.8
CSS0006253 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 7.3e-35 151.8 242 41.7
arahy.Tifrunner.gnm1.ann1.4HSG2Y Arachis hypogaea HOM05D007616 ORTHO05D008751 1.6e-34 150.6 249 45.4
Sabra03G0004800 Salix brachista HOM05D007616 ORTHO05D008751 1.6e-34 150.6 241 45.2
ClCG11G013320 Citrullus lanatus HOM05D007616 ORTHO05D008751 8.1e-34 148.3 224 51.3
MSTRG.20315 Avicennia marina HOM05D007616 ORTHO05D008751 3.1e-33 146.4 249 46.2
Sabra01G0168700 Salix brachista HOM05D007616 ORTHO05D008751 1.5e-32 144.1 248 48.0
Glyma.12G167600 Glycine max HOM05D007616 ORTHO05D008751 2.6e-32 143.3 244 43.0
Cc02_g23010 Coffea canephora HOM05D007616 ORTHO05D008751 3.4e-32 142.9 245 43.3
Manes.07G023000 Manihot esculenta HOM05D007616 ORTHO05D008751 3.4e-32 142.9 248 44.8
Phvul.006G218400 Phaseolus vulgaris HOM05D007616 ORTHO05D008751 3.4e-32 142.9 239 42.7
Oeu058636.1 Olea europaea HOM05D007616 ORTHO05D008751 1.7e-31 140.6 240 47.9
Nn5g27765 Nelumbo nucifera HOM05D007616 ORTHO05D008751 2.2e-31 140.2 257 42.4
Aqoxy6G00124 Aquilegia oxysepala HOM05D007616 ORTHO05D008751 3.8e-31 139.4 238 43.3
Migut.B00786 Erythranthe guttata HOM05D007616 ORTHO05D008751 1.4e-30 137.5 256 44.9
CANSAT54G0672 Cannabis sativa HOM05D007616 ORTHO05D008751 1.9e-30 137.1 238 44.1
Actinidia06472 Actinidia chinensis HOM05D007616 ORTHO05D008751 2.4e-30 136.7 225 45.8
TPR.G2142 Trifolium pratense HOM05D007616 ORTHO05D008751 2.4e-30 136.7 237 43.5
Psat1g223480 Pisum sativum HOM05D007616 ORTHO05D008751 4.1e-30 136.0 272 40.8
Medtr2g005910 Medicago truncatula HOM05D007616 ORTHO05D008751 7.1e-30 135.2 216 46.8
MELO3C011824.2 Cucumis melo HOM05D007616 ORTHO05D008751 1.2e-29 134.4 209 48.8
Lalb_Chr18g0061041 Lupinus albus HOM05D007616 ORTHO05D008751 1.6e-29 134.0 257 41.6
Lj6g0028114 Lotus japonicus HOM05D007616 ORTHO05D008751 2.1e-29 133.7 296 39.2
CAN.G798.53 Capsicum annuum HOM05D007616 ORTHO05D008751 4.6e-29 132.5 255 41.6
HPP92_005665 Vanilla planifolia HOM05D007616 ORTHO05D008751 4.6e-29 132.5 240 41.7
Rhsim05G0186200 Rhododendron simsii HOM05D007616 ORTHO05D008751 1.7e-28 130.6 256 42.2
HanXRQChr06g0181301 Helianthus annuus HOM05D007616 ORTHO05D008751 8.6e-28 128.3 253 42.3
PSO170G4229 Papaver somniferum HOM05D007616 ORTHO05D008751 1.1e-27 127.9 252 42.9
THA.LOC104816807 Tarenaya hassleriana HOM05D007616 ORTHO05D008751 2.5e-27 126.7 288 37.5
Ca_00046_v3 Cicer arietinum L. HOM05D001654 ORTHO05D002773 3.3e-27 126.3 139 56.1
ECA236G1993 Erigeron canadensis HOM05D007616 ORTHO05D008751 3.3e-27 126.3 260 41.2
Lsat_1_v5_gn_9_120740 Lactuca sativa HOM05D007616 ORTHO05D008751 3.3e-27 126.3 257 40.9
PGR142G0501 Punica granatum HOM05D007616 ORTHO05D008751 5.6e-27 125.6 363 33.9
PSO782G2099 Papaver somniferum HOM05D007616 ORTHO05D008751 1.2e-26 124.4 252 39.7
VMungo0540G1916 Vigna mungo HOM05D007616 ORTHO05D008751 1.6e-26 124.0 219 41.6
SGA_v2.0_scaffold272G46374 Striga asiatica HOM05D007616 ORTHO05D008751 6.9e-25 118.6 246 39.4
Sc20g0001190 Simmondsia chinensis HOM05D007616 ORTHO05D008751 2.0e-24 117.1 150 52.7
TWI14G0953 Tripterygium wilfordii HOM05D007616 ORTHO05D008751 4.4e-24 115.9 243 42.0
Potri.019G021000 Populus trichocarpa HOM05D007616 ORTHO05D008751 7.6e-24 115.2 254 40.6
CsaV3_5G029830 Cucumis sativus L. HOM05D001654 ORTHO05D002773 1.2e-21 107.8 181 47.0
GSVIVG01023272001 Vitis vinifera HOM05D007616 ORTHO05D008751 2.7e-21 106.7 260 38.1
AL2G17970 Arabidopsis lyrata HOM05D012662 ORTHO05D008751 2.3e-20 103.6 279 33.3
ECA240G3878 Erigeron canadensis HOM05D007616 ORTHO05D008751 3.0e-20 103.2 251 37.1
BcaC02g10705 Brassica carinata HOM05D007616 ORTHO05D008751 5.6e-19 99.0 212 38.7
AUR62037671 Chenopodium quinoa HOM05D002239 ORTHO05D002408 5.6e-19 99.0 280 33.9
FAN05G5322 Fragaria x ananassa HOM05D007616 ORTHO05D008751 1.3e-18 97.8 118 58.5
AUR62034500 Chenopodium quinoa HOM05D007616 ORTHO05D008751 1.6e-18 97.4 280 33.9
Nn1g08457 Nelumbo nucifera HOM05D007616 ORTHO05D008751 1.1e-17 94.7 240 36.7
ATR0090G002 Amborella trichopoda HOM05D007616 ORTHO05D008751 9.0e-17 91.7 235 34.9
Cfa004508 Carpinus fangiana HOM05D007616 ORTHO05D008751 3.4e-16 89.7 224 42.9
Ah.06g187740 Amaranthus hybridus HOM05D007616 ORTHO05D008751 4.5e-16 89.4 132 46.2
C01p35720 Brassica napus HOM05D007616 ORTHO05D008751 3.8e-15 86.3 145 44.1
BolC1t03530H Brassica oleracea HOM05D007616 ORTHO05D008751 3.8e-15 86.3 145 44.1
Haze_10065 Corylus avellana HOM05D001654 ORTHO05D002773 3.8e-15 86.3 218 42.7
Lsat_1_v5_gn_7_76421 Lactuca sativa HOM05D007616 ORTHO05D008751 5.4e-14 82.4 263 30.4
Hma1.2p1_0427F.1_g150730 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 1.2e-13 81.3 146 41.1
Os11g0195800 Oryza sativa ssp. japonica HOM05D007616 ORTHO05D008751 1.3e-12 77.8 288 29.5
SalBow3G1194 Salvia bowleyana HOM05D007616 ORTHO05D008751 1.8e-12 77.4 263 36.1
TAR624G1080 Trochodendron aralioides HOM05D007616 ORTHO05D008751 1.1e-11 74.7 119 40.3
Dinv07475 Davidia involucrata HOM05D001654 ORTHO05D002773 1.5e-11 74.3 114 43.9
Zm00001eb202050 Zea mays HOM05D007616 ORTHO05D008751 2.5e-11 73.6 280 28.6
Carub.0002s0656 Capsella rubella HOM05D012662 ORTHO05D008751 3.3e-11 73.2 267 31.5
Hma1.2p1_1108F.1_g257940 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 3.3e-11 73.2 245 35.9
C04p26930 Brassica napus HOM05D007616 ORTHO05D008751 4.3e-11 72.8 135 42.2
BolC4t24105H Brassica oleracea HOM05D007616 ORTHO05D008751 4.3e-11 72.8 135 42.2
vmacro19869 Vaccinium macrocarpon HOM05D007616 ORTHO05D008751 5.6e-11 72.4 216 31.9
Ciclev10003995m.g Citrus clementina HOM05D007616 ORTHO05D008751 3.6e-10 69.7 47 70.2
A09p18580 Brassica napus HOM05D012662 ORTHO05D008751 1.4e-09 67.8 188 33.5
QL11p039511 Quercus lobata HOM05D007616 ORTHO05D008751 2.4e-09 67.0 39 82.1
Nitab4.5_0000337g0140 Nicotiana tabacum HOM05D002661 ORTHO05D002786 4.5e-08 62.8 229 30.1
Sopen03g006340 Solanum pennellii HOM05D002661 ORTHO05D002786 4.5e-08 62.8 233 25.8
PGSC0003DMG400022533 Solanum tuberosum HOM05D002661 ORTHO05D002786 4.5e-08 62.8 233 26.2
TAR381G1099 Trochodendron aralioides HOM05D002661 ORTHO05D002786 7.6e-08 62.0 230 29.6
Solyc03g033550.3 Solanum lycopersicum HOM05D002661 ORTHO05D002786 9.9e-08 61.6 233 25.8
CAN.G1735.2 Capsicum annuum HOM05D002661 ORTHO05D002786 1.3e-07 61.2 227 25.6
QL02p011493 Quercus lobata HOM05D002661 ORTHO05D002786 2.2e-07 60.5 222 28.4
Rhsim05G0130500 Rhododendron simsii HOM05D007616 ORTHO05D008751 4.9e-07 59.3 101 41.6
Aqoxy4G02812 Aquilegia oxysepala HOM05D002661 ORTHO05D002786 6.4e-07 58.9 225 28.9
MBI05_g15357_MAGBIO Magnolia biondii HOM05D002661 ORTHO05D002786 8.4e-07 58.5 231 28.6
MD08G1013500 Malus domestica HOM05D002661 ORTHO05D002786 8.4e-07 58.5 233 28.8
MD15G1013000 Malus domestica HOM05D002661 ORTHO05D002786 8.4e-07 58.5 237 27.8
Phvul.009G016600 Phaseolus vulgaris HOM05D002661 ORTHO05D002786 1.4e-06 57.8 222 30.6
FvH4_2g38540 Fragaria vesca HOM05D002661 ORTHO05D002786 1.9e-06 57.4 242 26.4
COL.COLO4_26155 Corchorus olitorius HOM05D002661 ORTHO05D002786 2.4e-06 57.0 229 27.1
Lj4A25T51 Lonicera japonica HOM05D002661 ORTHO05D002786 2.4e-06 57.0 222 26.1
Ciclev10002504m.g Citrus clementina HOM05D002661 ORTHO05D002786 4.2e-06 56.2 222 27.5
Haze_22627 Corylus avellana HOM05D002661 ORTHO05D002786 4.2e-06 56.2 222 26.1
Potri.002G023000 Populus trichocarpa HOM05D002661 ORTHO05D002786 4.2e-06 56.2 234 28.2
Prupe.1G366100 Prunus persica HOM05D002661 ORTHO05D002786 4.2e-06 56.2 237 28.3
Actinidia16982 Actinidia chinensis HOM05D002661 ORTHO05D002786 5.5e-06 55.8 131 33.6
Os12g0182100 Oryza sativa ssp. japonica HOM05D052999 ORTHO05D049891 5.5e-06 55.8 195 32.3
Psat5g013240 Pisum sativum HOM05D002661 ORTHO05D002786 5.5e-06 55.8 227 28.6
Sp2g05500 Schrenkiella parvula HOM05D012662 ORTHO05D008751 7.1e-06 55.5 99 42.4
CiPaw.08G131700 Carya illinoinensis HOM05D002661 ORTHO05D002786 9.3e-06 55.1 233 26.2
Migut.C00825 Erythranthe guttata HOM05D002661 ORTHO05D002786 9.3e-06 55.1 230 24.3
FAN20G0494 Fragaria x ananassa HOM05D002661 ORTHO05D002786 9.3e-06 55.1 220 29.1
vmacro04348 Vaccinium macrocarpon HOM05D002661 ORTHO05D002786 9.3e-06 55.1 112 36.6


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