Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0173401 Rosa chinensis HOM05D004782 ORTHO05D005498 1.9e-143 512.7 297 100.0
FvH4_6g51920 Fragaria vesca HOM05D004782 ORTHO05D005498 5.1e-112 408.3 273 87.9
FAN05G5758 Fragaria x ananassa HOM05D004782 ORTHO05D005498 8.9e-109 397.5 293 79.5
FAN14G2962 Fragaria x ananassa HOM05D004782 ORTHO05D005498 2.6e-108 396.0 273 86.1
FAN02G4014 Fragaria x ananassa HOM05D004782 ORTHO05D005498 6.6e-104 381.3 285 82.5
Prupe.3G294600 Prunus persica HOM05D004782 ORTHO05D005498 2.7e-89 332.8 278 71.9
MD09G1021700 Malus domestica HOM05D004782 ORTHO05D005498 3.7e-86 322.4 273 71.4
Haze_14764 Corylus avellana HOM05D004782 ORTHO05D005498 7.6e-84 314.7 274 69.3
MD17G1021600 Malus domestica HOM05D004782 ORTHO05D005498 1.9e-82 310.1 275 69.8
Ciclev10018402m.g Citrus clementina HOM05D004782 ORTHO05D005498 1.1e-77 294.3 274 65.0
Lalb_Chr14g0362901 Lupinus albus HOM05D004782 ORTHO05D005498 2.2e-75 286.6 271 64.2
TWI36G0764 Tripterygium wilfordii HOM05D004782 ORTHO05D005498 1.1e-74 284.3 274 62.4
Cfa007334 Carpinus fangiana HOM05D004782 ORTHO05D005498 3.2e-74 282.7 271 58.7
Sabra16G0222000 Salix brachista HOM05D004782 ORTHO05D005498 5.5e-74 282.0 275 60.4
TAR374G0154 Trochodendron aralioides HOM05D004782 ORTHO05D005498 5.1e-72 275.4 287 54.7
Atru.chr6.2436 Acer truncatum HOM05D004782 ORTHO05D005498 1.1e-71 274.2 279 60.2
Dinv25722 Davidia involucrata HOM05D004782 ORTHO05D005498 1.5e-71 273.9 268 55.2
Duzib147G0999 Durio zibethinus HOM05D004782 ORTHO05D005498 1.5e-71 273.9 263 62.4
CANSAT01G0425 Cannabis sativa HOM05D004782 ORTHO05D005498 4.3e-71 272.3 280 63.9
Nn3g16678 Nelumbo nucifera HOM05D004782 ORTHO05D005498 1.3e-70 270.8 275 56.7
VMungo0647G2046 Vigna mungo HOM05D004782 ORTHO05D005498 1.6e-70 270.4 284 63.0
Potri.001G342400 Populus trichocarpa HOM05D004782 ORTHO05D005498 2.8e-70 269.6 275 61.5
TPR.G1089 Trifolium pratense HOM05D004782 ORTHO05D005498 2.8e-70 269.6 271 62.0
Manes.15G152300 Manihot esculenta HOM05D004782 ORTHO05D005498 1.1e-69 267.7 269 62.8
Hma1.2p1_0818F.1_g223300 Hydrangea macrophylla HOM05D004782 ORTHO05D005498 3.1e-69 266.2 275 54.2
Ca_07059_v3 Cicer arietinum L. HOM05D004782 ORTHO05D005498 6.9e-69 265.0 270 63.3
Cpa.g.sc130.76 Carica papaya HOM05D004782 ORTHO05D005498 9.0e-69 264.6 271 62.7
Glyma.16G068500 Glycine max HOM05D004782 ORTHO05D005498 1.5e-68 263.8 284 62.0
Phvul.008G228200 Phaseolus vulgaris HOM05D004782 ORTHO05D005498 2.6e-68 263.1 290 59.7
Lj1g0001798 Lotus japonicus HOM05D004782 ORTHO05D005498 3.4e-68 262.7 270 61.5
COL.COLO4_29185 Corchorus olitorius HOM05D004782 ORTHO05D005498 5.9e-68 261.9 264 57.2
Sc03g0007250 Simmondsia chinensis HOM05D004782 ORTHO05D005498 1.0e-67 261.2 275 58.9
Thecc.04G020400 Theobroma cacao HOM05D004782 ORTHO05D005498 1.3e-67 260.8 272 66.5
Psat5g038480 Pisum sativum HOM05D004782 ORTHO05D005498 3.8e-67 259.2 271 61.6
Gorai.011G094100 Gossypium raimondii HOM05D004782 ORTHO05D005498 6.5e-67 258.5 261 64.0
Eucgr.I01726 Eucalyptus grandis HOM05D004782 ORTHO05D005498 1.1e-66 257.7 271 59.8
CSS0038869 Camellia sinensis var. sinensis HOM05D004782 ORTHO05D005498 3.2e-66 256.1 269 55.8
Gohir.D10G085900 Gossypium hirsutum HOM05D004782 ORTHO05D005498 5.5e-66 255.4 261 63.6
Hund13000 Selenicereus undatus HOM05D004782 ORTHO05D005498 4.6e-65 252.3 273 57.1
Gohir.A10G101700 Gossypium hirsutum HOM05D004782 ORTHO05D005498 1.0e-64 251.1 261 62.8
Ah.02g128240 Amaranthus hybridus HOM05D004782 ORTHO05D005498 1.4e-64 250.8 271 60.5
Cc07_g00060 Coffea canephora HOM05D004782 ORTHO05D005498 3.9e-64 249.2 271 55.7
EL10Ac6g14096 Beta vulgaris HOM05D004782 ORTHO05D005498 8.8e-64 248.1 274 61.3
PSO017G6962 Papaver somniferum HOM05D004782 ORTHO05D005498 1.1e-63 247.7 278 61.2
QL02p073881 Quercus lobata HOM05D004782 ORTHO05D005498 2.0e-63 246.9 290 60.3
PSO478G2740 Papaver somniferum HOM05D004782 ORTHO05D005498 2.5e-63 246.5 277 61.4
Glyma.16G018100 Glycine max HOM05D004782 ORTHO05D005498 5.7e-63 245.4 285 59.3
Aqoxy3G01250 Aquilegia oxysepala HOM05D004782 ORTHO05D005498 1.7e-62 243.8 277 53.1
AUR62028428 Chenopodium quinoa HOM05D004782 ORTHO05D005498 1.7e-62 243.8 280 52.5
Medtr7g033120 Medicago truncatula HOM05D004782 ORTHO05D005498 1.7e-62 243.8 273 59.0
ClCG10G013750 Citrullus lanatus HOM05D004782 ORTHO05D005498 4.8e-62 242.3 289 56.4
Dinv33420 Davidia involucrata HOM05D004782 ORTHO05D005498 8.2e-62 241.5 247 58.3
CAN.G473.32 Capsicum annuum HOM05D004782 ORTHO05D005498 1.4e-61 240.7 281 52.7
PGR142G1749 Punica granatum HOM05D004782 ORTHO05D005498 3.1e-61 239.6 263 60.5
MELO3C026593.2 Cucumis melo HOM05D004782 ORTHO05D005498 7.7e-60 235.0 291 59.5
Peaxi162Scf00420g00132 Petunia axillaris HOM05D004782 ORTHO05D005498 1.0e-59 234.6 272 60.7
SGA_v2.0_scaffold135G34920 Striga asiatica HOM05D004782 ORTHO05D005498 1.7e-59 233.8 258 54.3
PSO339G5508 Papaver somniferum HOM05D004782 ORTHO05D005498 2.2e-59 233.4 278 54.7
Rhsim08G0048200 Rhododendron simsii HOM05D004782 ORTHO05D005498 6.5e-59 231.9 264 51.5
CsaV3_3G042920 Cucumis sativus L. HOM05D004782 ORTHO05D005498 1.1e-58 231.1 288 58.7
CiPaw.04G029900 Carya illinoinensis HOM05D004782 ORTHO05D005498 1.4e-58 230.7 234 59.4
CiPaw.03G046200 Carya illinoinensis HOM05D004782 ORTHO05D005498 3.2e-58 229.6 234 65.8
MSTRG.3133 Avicennia marina HOM05D004782 ORTHO05D005498 2.1e-57 226.9 264 57.2
Migut.H00022 Erythranthe guttata HOM05D004782 ORTHO05D005498 6.1e-57 225.3 265 56.6
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 8.8e-56 221.5 268 50.7
unitig_62.g23373 Utricularia gibba HOM05D004782 ORTHO05D005498 8.8e-56 221.5 260 56.9
Sopen02g038150 Solanum pennellii HOM05D004782 ORTHO05D005498 2.0e-55 220.3 279 50.2
Sp6g29580 Schrenkiella parvula HOM05D004782 ORTHO05D005498 4.4e-55 219.2 243 62.1
HanXRQChr14g0451131 Helianthus annuus HOM05D004782 ORTHO05D005498 9.7e-55 218.0 285 53.3
Actinidia18440 Actinidia chinensis HOM05D004782 ORTHO05D005498 1.3e-54 217.6 224 54.9
Solyc02g093510.3 Solanum lycopersicum HOM05D004782 ORTHO05D005498 1.7e-54 217.2 279 49.5
AL6G25170 Arabidopsis lyrata HOM05D004782 ORTHO05D005498 2.2e-54 216.9 245 59.6
ATR0122G021 Amborella trichopoda HOM05D004782 ORTHO05D005498 6.3e-54 215.3 265 50.6
Sed0010446 Sechium edule HOM05D004782 ORTHO05D005498 1.8e-53 213.8 319 50.8
FAN09G1186 Fragaria x ananassa HOM05D004782 ORTHO05D005498 2.4e-53 213.4 111 94.6
C02p06750 Brassica napus HOM05D004782 ORTHO05D005498 4.1e-53 212.6 243 58.8
BraA02t05220Z Brassica rapa HOM05D004782 ORTHO05D005498 4.1e-53 212.6 224 62.9
BcaB01g06372 Brassica carinata HOM05D004782 ORTHO05D005498 5.3e-53 212.2 237 58.2
AT5G14440 Arabidopsis thaliana HOM05D004782 ORTHO05D005498 7.0e-53 211.8 246 58.5
vmacro18299 Vaccinium macrocarpon HOM05D004782 ORTHO05D005498 7.0e-53 211.8 300 51.7
THA.LOC104802393 Tarenaya hassleriana HOM05D004782 ORTHO05D005498 9.1e-53 211.5 267 59.6
C03p07650 Brassica napus HOM05D004782 ORTHO05D005498 1.2e-52 211.1 240 58.3
SalBow1G0524 Salvia bowleyana HOM05D004782 ORTHO05D005498 4.5e-52 209.1 268 55.2
BcaNung03155 Brassica carinata HOM05D004782 ORTHO05D005498 5.9e-52 208.8 238 60.9
CARHR198870 Cardamine hirsuta HOM05D004782 ORTHO05D005498 7.7e-52 208.4 284 53.9
MBI06_g10164_MAGBIO Magnolia biondii HOM05D004782 ORTHO05D005498 1.7e-51 207.2 286 46.2
BraA03t09994Z Brassica rapa HOM05D004782 ORTHO05D005498 5.0e-51 205.7 239 55.6
BcaC03g13490 Brassica carinata HOM05D004782 ORTHO05D005498 8.5e-51 204.9 275 54.5
Aa31LG11G15220 Aethionema arabicum HOM05D004782 ORTHO05D005498 1.1e-50 204.5 269 55.4
ECA238G0280 Erigeron canadensis HOM05D004782 ORTHO05D005498 1.9e-50 203.8 277 52.3
BolC2t06621H Brassica oleracea HOM05D004782 ORTHO05D005498 3.2e-50 203.0 242 58.3
Thhalv10014310m.g Eutrema salsugineum HOM05D004782 ORTHO05D005498 5.5e-50 202.2 252 49.6
GSVIVG01032375001 Vitis vinifera HOM05D004782 ORTHO05D005498 5.5e-50 202.2 231 59.3
A03p06620 Brassica napus HOM05D004782 ORTHO05D005498 7.2e-50 201.8 285 49.5
BolC3t13265H Brassica oleracea HOM05D004782 ORTHO05D005498 7.2e-50 201.8 285 50.2
CDE09G1218 Ceratophyllum demersum HOM05D004782 ORTHO05D005498 9.4e-50 201.4 260 48.1
Lsat_1_v5_gn_2_91141 Lactuca sativa HOM05D004782 ORTHO05D005498 3.6e-49 199.5 279 49.8
DCAR_011265 Daucus carota HOM05D004782 ORTHO05D005498 4.7e-49 199.1 258 54.3
A02p02500 Brassica napus HOM05D004782 ORTHO05D005498 6.1e-49 198.7 244 58.2
Nitab4.5_0001562g0090 Nicotiana tabacum HOM05D004782 ORTHO05D005498 1.0e-48 198.0 238 61.3
CDE02G1226 Ceratophyllum demersum HOM05D004782 ORTHO05D005498 3.0e-48 196.4 261 47.1
Carub.0006s1262 Capsella rubella HOM05D004782 ORTHO05D005498 3.9e-48 196.1 235 57.9
AT5G40570 Arabidopsis thaliana HOM05D004782 ORTHO05D005498 2.6e-47 193.4 259 46.3
CARHR261410 Cardamine hirsuta HOM05D004782 ORTHO05D005498 2.2e-46 190.3 266 45.9
PGSC0003DMG400012612 Solanum tuberosum HOM05D004782 ORTHO05D005498 1.1e-45 188.0 244 47.1
THA.LOC104805360 Tarenaya hassleriana HOM05D004782 ORTHO05D005498 1.1e-45 188.0 270 46.7
Os04g0480400 Oryza sativa ssp. japonica HOM05D004782 ORTHO05D005498 3.1e-45 186.4 280 42.5
PGR083G1527 Punica granatum HOM05D004782 ORTHO05D005498 9.1e-45 184.9 281 44.1
SEGI_27694 Sequoiadendron giganteum HOM05D004782 ORTHO05D005498 4.5e-44 182.6 272 42.3
BcaB02g07942 Brassica carinata HOM05D004782 ORTHO05D005498 1.0e-43 181.4 253 45.1
Carub.0007s3495 Capsella rubella HOM05D004782 ORTHO05D005498 1.0e-43 181.4 261 43.7
Sp7g01290 Schrenkiella parvula HOM05D004782 ORTHO05D005498 1.7e-43 180.6 261 44.4
AL7G49230 Arabidopsis lyrata HOM05D004782 ORTHO05D005498 5.0e-43 179.1 265 45.3
Aa31LG9G1060 Aethionema arabicum HOM05D004782 ORTHO05D005498 1.9e-42 177.2 265 44.5
BcaC03g13488 Brassica carinata HOM05D004782 ORTHO05D005498 1.9e-42 177.2 119 72.3
DCAR_021737 Daucus carota HOM05D004782 ORTHO05D005498 3.2e-42 176.4 270 43.7
Hma1.2p1_1747F.1_g300620 Hydrangea macrophylla HOM05D004782 ORTHO05D005498 9.4e-42 174.9 258 46.1
BcaC03g13487 Brassica carinata HOM05D000631 ORTHO05D005498 2.7e-41 173.3 119 70.6
BcaC08g44464 Brassica carinata HOM05D004782 ORTHO05D005498 2.7e-41 173.3 253 43.9
Nitab4.5_0006683g0090 Nicotiana tabacum HOM05D004782 ORTHO05D005498 2.7e-41 173.3 248 51.6
Zm00001eb424970 Zea mays HOM05D004782 ORTHO05D005498 4.7e-41 172.6 281 40.9
Thhalv10027935m.g Eutrema salsugineum HOM05D004782 ORTHO05D005498 1.8e-40 170.6 266 42.9
BcaNung03158 Brassica carinata HOM05D004782 ORTHO05D005498 5.2e-40 169.1 275 41.5
BolC6t37113H Brassica oleracea HOM05D000001 ORTHO05D000003 8.8e-40 168.3 268 41.8
Lju41A44T82 Lonicera japonica HOM05D004782 ORTHO05D005498 6.3e-38 162.2 215 46.5
arahy.Tifrunner.gnm1.ann1.65GF4N Arachis hypogaea HOM05D004782 ORTHO05D005498 1.4e-37 161.0 272 46.0
arahy.Tifrunner.gnm1.ann1.6S1J49 Arachis hypogaea HOM05D004782 ORTHO05D005498 3.1e-37 159.8 302 45.7
Hma1.2p1_1563F.1_g290780 Hydrangea macrophylla HOM05D004782 ORTHO05D005498 1.3e-35 154.5 108 66.7
BcaC01g01812 Brassica carinata HOM05D004782 ORTHO05D005498 1.8e-32 144.1 243 39.1
Actinidia33328 Actinidia chinensis HOM05D004782 ORTHO05D005498 5.2e-32 142.5 105 62.9
BolC7t41458H Brassica oleracea HOM05D004782 ORTHO05D005498 2.0e-31 140.6 112 58.9
C08p04380 Brassica napus HOM05D004782 ORTHO05D005498 5.7e-31 139.0 122 56.6
C09p40620 Brassica napus HOM05D004782 ORTHO05D005498 7.5e-31 138.7 303 34.7
HPP92_008082 Vanilla planifolia HOM05D004782 ORTHO05D005498 1.7e-30 137.5 282 37.6
BcaC01g01740 Brassica carinata HOM05D004782 ORTHO05D005498 2.8e-30 136.7 124 54.0
BolC3t19536H Brassica oleracea HOM05D004782 ORTHO05D005498 2.8e-30 136.7 124 54.0
BolC9t56944H Brassica oleracea HOM05D004782 ORTHO05D005498 2.9e-27 126.7 323 32.5
BcaC04g20684 Brassica carinata HOM05D004782 ORTHO05D005498 1.9e-26 124.0 244 36.9
BcaC05g29299 Brassica carinata HOM05D004782 ORTHO05D014986 1.2e-25 121.3 97 58.8
BolC8t47241H Brassica oleracea HOM05D004782 ORTHO05D005498 1.2e-25 121.3 95 60.0
C05p55830 Brassica napus HOM05D004782 ORTHO05D005498 4.7e-25 119.4 86 62.8
Mapoly0013s0192 Marchantia polymorpha HOM05D004782 ORTHO05D005498 6.1e-25 119.0 283 42.8
BcaC07g37075 Brassica carinata HOM05D004782 ORTHO05D005498 1.0e-24 118.2 205 37.6
C03p72400 Brassica napus HOM05D000186 ORTHO05D005498 2.3e-24 117.1 108 52.8
C07p10120 Brassica napus HOM05D000186 ORTHO05D005498 2.3e-24 117.1 103 54.4
Sabra15G0083700 Salix brachista HOM05D004782 ORTHO05D005498 6.8e-24 115.5 136 52.9
AagrBONN_evm.TU.Sc2ySwM_368.1010 Anthoceros agrestis HOM05D004782 ORTHO05D005498 6.3e-22 109.0 295 35.3
Gohir.A04G046350 Gossypium hirsutum HOM05D004782 ORTHO05D005498 1.8e-21 107.5 79 65.8
BolC5t34251H Brassica oleracea HOM05D004782 ORTHO05D005498 2.4e-21 107.1 86 58.1
SMO119G0179 Selaginella moellendorffii HOM05D004782 ORTHO05D005498 3.3e-18 96.7 286 29.4
Lj7A601G104 Lonicera japonica HOM05D004782 ORTHO05D005498 4.0e-16 89.7 199 38.2
MD10G1172000 Malus domestica HOM05D004782 ORTHO05D005498 3.2e-13 80.1 82 62.2
Aqoxy3G01251 Aquilegia oxysepala HOM05D004782 ORTHO05D005498 6.0e-12 75.9 89 47.2
CDE06G1742 Ceratophyllum demersum HOM05D004782 ORTHO05D005498 7.8e-12 75.5 107 43.0
CBR_g2746 Chara braunii HOM05D001539 ORTHO05D000937 1.9e-10 70.9 336 24.7
Actinidia35780 Actinidia chinensis HOM05D004782 ORTHO05D005498 5.2e-08 62.8 41 68.3


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