Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0173251 Rosa chinensis HOM05D003450 ORTHO05D004150 3.1e-165 585.1 300 100.0
RcHm_v2.0_Chr2g0173241 Rosa chinensis HOM05D003450 ORTHO05D004150 6.0e-113 411.4 307 75.6
FAN09G1073 Fragaria x ananassa HOM05D003450 ORTHO05D004150 2.6e-108 396.0 307 73.0
FAN02G3092 Fragaria x ananassa HOM05D003450 ORTHO05D004150 1.7e-107 393.3 307 72.6
FAN14G2265 Fragaria x ananassa HOM05D003450 ORTHO05D004150 2.2e-107 392.9 307 72.3
FAN05G3254 Fragaria x ananassa HOM05D003450 ORTHO05D004150 2.9e-107 392.5 307 73.0
FvH4_6g51710 Fragaria vesca HOM05D003450 ORTHO05D004150 5.0e-107 391.7 307 72.0
Prupe.3G293600 Prunus persica HOM05D003450 ORTHO05D004150 1.5e-95 353.6 310 65.2
MD17G1022800 Malus domestica HOM05D003450 ORTHO05D004150 2.8e-94 349.4 310 64.5
MD09G1023300 Malus domestica HOM05D003450 ORTHO05D004150 1.8e-93 346.7 310 63.9
CiPaw.09G022500 Carya illinoinensis HOM05D003450 ORTHO05D004150 1.4e-90 337.0 312 60.9
QL02p074015 Quercus lobata HOM05D003450 ORTHO05D004150 1.4e-90 337.0 309 61.2
Cfa007340 Carpinus fangiana HOM05D003450 ORTHO05D004150 9.4e-90 334.3 312 60.6
Haze_14757 Corylus avellana HOM05D003450 ORTHO05D004150 1.4e-88 330.5 316 59.8
GSVIVG01000649001 Vitis vinifera HOM05D003450 ORTHO05D004150 4.4e-87 325.5 309 59.9
Hma1.2p1_1136F.1_g260470 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 7.0e-85 318.2 306 56.9
Hma1.2p1_1136F.1_g260480 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 7.0e-85 318.2 306 56.9
Dinv37611 Davidia involucrata HOM05D003450 ORTHO05D004150 3.5e-84 315.8 307 56.7
Gorai.012G065100 Gossypium raimondii HOM05D003450 ORTHO05D004150 5.9e-84 315.1 309 57.3
ClCG09G019370 Citrullus lanatus HOM05D003450 ORTHO05D004150 1.0e-83 314.3 312 57.1
vmacro11398 Vaccinium macrocarpon HOM05D003450 ORTHO05D004150 1.1e-82 310.8 287 59.2
QL03p035003 Quercus lobata HOM05D003450 ORTHO05D004150 2.5e-82 309.7 309 57.3
Duzib264G1290 Durio zibethinus HOM05D003450 ORTHO05D004150 3.2e-82 309.3 309 55.7
TAR623G1303 Trochodendron aralioides HOM05D003450 ORTHO05D004150 3.2e-82 309.3 328 54.3
Gohir.A05G354700 Gossypium hirsutum HOM05D003450 ORTHO05D004150 4.2e-82 308.9 309 57.0
Thecc.04G019300 Theobroma cacao HOM05D003450 ORTHO05D004150 1.2e-81 307.4 309 56.6
CSS0002385 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 2.1e-81 306.6 309 55.0
Potri.001G343500 Populus trichocarpa HOM05D003450 ORTHO05D004150 2.1e-81 306.6 309 56.3
Eucgr.I01732 Eucalyptus grandis HOM05D003450 ORTHO05D004150 2.7e-81 306.2 308 55.8
PGR142G3144 Punica granatum HOM05D003450 ORTHO05D004150 6.1e-81 305.1 308 55.2
MELO3C021591.2 Cucumis melo HOM05D003450 ORTHO05D004150 1.4e-80 303.9 309 55.7
Lj5C248G9 Lonicera japonica HOM05D003450 ORTHO05D004150 1.4e-80 303.9 309 55.3
Sabra16G0222800 Salix brachista HOM05D003450 ORTHO05D004150 1.4e-80 303.9 309 56.3
CANSAT64G2043 Cannabis sativa HOM05D003450 ORTHO05D004150 1.5e-79 300.4 312 54.2
Lj2g0026665 Lotus japonicus HOM05D003450 ORTHO05D004150 2.0e-79 300.1 312 55.4
TWI56G0323 Tripterygium wilfordii HOM05D003450 ORTHO05D004150 3.3e-79 299.3 308 55.2
Duzib147G0628 Durio zibethinus HOM05D003450 ORTHO05D004150 4.4e-79 298.9 309 55.3
CsaV3_5G027040 Cucumis sativus L. HOM05D003450 ORTHO05D004150 1.7e-78 297.0 312 54.5
Manes.15G151800 Manihot esculenta HOM05D003450 ORTHO05D004150 1.7e-78 297.0 309 54.7
Ciclev10014189m.g Citrus clementina HOM05D003450 ORTHO05D004150 2.2e-78 296.6 309 54.7
Manes.17G111200 Manihot esculenta HOM05D003450 ORTHO05D004150 3.1e-77 292.7 309 53.4
arahy.Tifrunner.gnm1.ann1.Q7XHAR Arachis hypogaea HOM05D003450 ORTHO05D004150 5.3e-77 292.0 309 54.4
arahy.Tifrunner.gnm1.ann1.F3BVF1 Arachis hypogaea HOM05D003450 ORTHO05D004150 3.5e-76 289.3 311 53.7
Sed0014883 Sechium edule HOM05D003450 ORTHO05D004150 5.9e-76 288.5 312 54.2
Migut.E01197 Erythranthe guttata HOM05D003450 ORTHO05D004150 1.0e-75 287.7 309 53.4
Nn2g10559 Nelumbo nucifera HOM05D003450 ORTHO05D004150 1.3e-75 287.3 311 53.4
Glyma.19G056700 Glycine max HOM05D003450 ORTHO05D004150 5.0e-75 285.4 312 51.9
Lalb_Chr18g0055341 Lupinus albus HOM05D003450 ORTHO05D004150 5.0e-75 285.4 310 52.9
Sed0008503 Sechium edule HOM05D003450 ORTHO05D004150 5.0e-75 285.4 312 53.5
Peaxi162Scf00074g01921 Petunia axillaris HOM05D003450 ORTHO05D004150 1.5e-74 283.9 309 53.7
Oeu042349.1 Olea europaea HOM05D003450 ORTHO05D004150 1.9e-74 283.5 309 52.8
Phvul.004G005200 Phaseolus vulgaris HOM05D003450 ORTHO05D004150 2.5e-74 283.1 313 55.3
Ca_04147_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 3.2e-74 282.7 312 51.3
Ca_30596_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 3.2e-74 282.7 312 51.3
TPR.G31948 Trifolium pratense HOM05D003450 ORTHO05D004150 1.2e-73 280.8 312 51.9
Psat1g053760 Pisum sativum HOM05D003450 ORTHO05D004150 1.6e-73 280.4 313 50.5
SGA_v2.0_scaffold76G25156 Striga asiatica HOM05D003450 ORTHO05D004150 2.1e-73 280.0 308 52.3
MSTRG.11963 Avicennia marina HOM05D003450 ORTHO05D004150 2.7e-73 279.6 308 50.6
Glyma.19G003200 Glycine max HOM05D003450 ORTHO05D004150 3.6e-73 279.3 310 53.5
VMungo0464G1019 Vigna mungo HOM05D003450 ORTHO05D004150 1.0e-72 277.7 310 53.2
Nitab4.5_0002282g0060 Nicotiana tabacum HOM05D003450 ORTHO05D004150 1.4e-72 277.3 311 53.4
Hund15478 Selenicereus undatus HOM05D003450 ORTHO05D004150 1.4e-72 277.3 287 54.0
Cc08_g15080 Coffea canephora HOM05D003450 ORTHO05D004150 1.8e-72 276.9 310 51.6
Sc07g0005180 Simmondsia chinensis HOM05D003450 ORTHO05D004150 2.3e-72 276.6 330 49.7
Nitab4.5_0006540g0050 Nicotiana tabacum HOM05D003450 ORTHO05D004150 4.0e-72 275.8 313 53.4
Medtr6g004510 Medicago truncatula HOM05D003450 ORTHO05D004150 1.2e-71 274.2 312 49.4
Sopen08g029730 Solanum pennellii HOM05D003450 ORTHO05D004150 5.7e-71 271.9 309 51.8
CAN.G532.15 Capsicum annuum HOM05D003450 ORTHO05D004150 7.5e-71 271.6 308 51.9
Aqoxy6G00591 Aquilegia oxysepala HOM05D003450 ORTHO05D004150 2.8e-70 269.6 312 49.0
Lsat_1_v5_gn_3_9121 Lactuca sativa HOM05D003450 ORTHO05D004150 3.1e-69 266.2 313 48.9
Solyc08g081410.3 Solanum lycopersicum HOM05D003450 ORTHO05D004150 5.4e-69 265.4 309 50.8
AUR62009512 Chenopodium quinoa HOM05D003450 ORTHO05D004150 1.2e-68 264.2 312 49.4
HanXRQChr17g0533281 Helianthus annuus HOM05D003450 ORTHO05D004150 2.7e-68 263.1 311 48.6
Lalb_Chr15g0086731 Lupinus albus HOM05D003450 ORTHO05D004150 5.9e-68 261.9 309 49.5
SalBow8G1100 Salvia bowleyana HOM05D003450 ORTHO05D004150 6.5e-67 258.5 309 47.9
SalBow8G1997 Salvia bowleyana HOM05D003450 ORTHO05D004150 6.5e-67 258.5 309 47.9
ECA246G5325 Erigeron canadensis HOM05D003450 ORTHO05D004150 1.9e-66 256.9 311 48.6
MBI14_g36922_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 4.7e-65 252.3 312 47.8
EL10Ac5g11313 Beta vulgaris HOM05D003450 ORTHO05D004150 1.8e-64 250.4 340 44.1
CSS0024266 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.8e-64 250.4 286 52.1
Oeu059564.1 Olea europaea HOM05D003450 ORTHO05D004150 6.8e-64 248.4 243 57.2
A02p35530 Brassica napus HOM05D003450 ORTHO05D004150 1.2e-63 247.7 309 46.0
AUR62034774 Chenopodium quinoa HOM05D003450 ORTHO05D004150 1.2e-63 247.7 316 46.8
DCAR_004619 Daucus carota HOM05D003450 ORTHO05D004150 1.2e-63 247.7 315 45.4
PSO421G0225 Papaver somniferum HOM05D003450 ORTHO05D004150 1.2e-63 247.7 311 48.2
Lj8A217T73 Lonicera japonica HOM05D003450 ORTHO05D004150 1.5e-63 247.3 308 48.1
Ah.02g116930 Amaranthus hybridus HOM05D003450 ORTHO05D004150 2.6e-63 246.5 310 47.4
BraA02t08553Z Brassica rapa HOM05D003450 ORTHO05D004150 3.4e-63 246.1 309 45.6
PSO210G4892 Papaver somniferum HOM05D003450 ORTHO05D004150 3.4e-63 246.1 309 46.9
Hund02491 Selenicereus undatus HOM05D003450 ORTHO05D004150 3.4e-63 246.1 309 47.2
BcaC03g17471 Brassica carinata HOM05D003450 ORTHO05D004150 5.7e-63 245.4 309 45.0
C02p54300 Brassica napus HOM05D003450 ORTHO05D004150 7.5e-63 245.0 309 45.3
BolC2t11498H Brassica oleracea HOM05D003450 ORTHO05D004150 7.5e-63 245.0 310 45.8
ECA233G1844 Erigeron canadensis HOM05D003450 ORTHO05D004150 1.3e-62 244.2 309 46.6
unitig_61.g26360 Utricularia gibba HOM05D003450 ORTHO05D004150 1.3e-62 244.2 309 46.0
Sp2g16700 Schrenkiella parvula HOM05D003450 ORTHO05D004150 4.9e-62 242.3 314 45.5
Thhalv10003626m.g Eutrema salsugineum HOM05D003450 ORTHO05D004150 6.3e-62 241.9 312 45.5
BcaB07g30154 Brassica carinata HOM05D003450 ORTHO05D004150 1.1e-61 241.1 315 45.4
PSO063G0895 Papaver somniferum HOM05D003450 ORTHO05D004150 1.1e-61 241.1 313 48.2
THA.LOC104825318 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 2.4e-61 240.0 312 46.2
BcaC06g33806 Brassica carinata HOM05D003450 ORTHO05D004150 1.2e-60 237.7 312 44.6
A06p41100 Brassica napus HOM05D003450 ORTHO05D004150 1.6e-60 237.3 312 44.2
BraA06t27033Z Brassica rapa HOM05D003450 ORTHO05D004150 1.6e-60 237.3 312 44.2
Aa31LG2G5130 Aethionema arabicum HOM05D003450 ORTHO05D004150 3.5e-60 236.1 312 44.6
CARHR148900 Cardamine hirsuta HOM05D003450 ORTHO05D004150 5.9e-60 235.3 312 44.6
AL5G16950 Arabidopsis lyrata HOM05D003450 ORTHO05D004150 7.7e-60 235.0 312 44.6
C07p36640 Brassica napus HOM05D003450 ORTHO05D004150 7.7e-60 235.0 312 44.6
AT3G27530 Arabidopsis thaliana HOM05D003450 ORTHO05D004150 2.3e-59 233.4 312 44.9
BolC7t44182H Brassica oleracea HOM05D003450 ORTHO05D004150 2.9e-59 233.0 313 44.4
BcaC06g30980 Brassica carinata HOM05D003450 ORTHO05D004150 8.6e-59 231.5 312 43.6
CSS0021042 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.1e-58 231.1 311 48.2
THA.LOC104823952 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 1.5e-58 230.7 314 46.2
Carub.0005s0596 Capsella rubella HOM05D003450 ORTHO05D004150 3.3e-58 229.6 313 43.5
PGSC0003DMG400012328 Solanum tuberosum HOM05D003450 ORTHO05D004150 2.1e-57 226.9 244 52.9
CSS0048429 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 4.7e-57 225.7 305 47.5
PSO210G3071 Papaver somniferum HOM05D003450 ORTHO05D004150 6.1e-57 225.3 309 44.0
CSS0016783 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 2.3e-56 223.4 183 61.2
Hma1.2p1_1172F.1_g263680 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 3.0e-56 223.0 227 54.2
CSS0043437 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 8.9e-56 221.5 232 54.3
ATR0068G094 Amborella trichopoda HOM05D003450 ORTHO05D004150 2.8e-49 199.9 312 40.7
CSS0005577 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.8e-48 197.2 326 42.0
Zm00001eb410430 Zea mays HOM05D003450 ORTHO05D004150 1.3e-46 191.0 310 37.7
Solyc02g075610.4 Solanum lycopersicum HOM05D003450 ORTHO05D004150 8.3e-46 188.3 244 46.7
Zm00001eb137680 Zea mays HOM05D003450 ORTHO05D004150 4.1e-45 186.0 310 37.1
Gohir.D07G231100 Gossypium hirsutum HOM05D003450 ORTHO05D004150 2.0e-44 183.7 213 51.2
Os12g0538900 Oryza sativa ssp. japonica HOM05D003450 ORTHO05D004150 1.0e-43 181.4 243 40.7
MBI14_g35409_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 6.6e-43 178.7 245 46.1
HPP92_017150 Vanilla planifolia HOM05D003450 ORTHO05D004150 1.1e-40 171.4 324 35.5
CAN.G293.1 Capsicum annuum HOM05D003450 ORTHO05D004150 4.0e-40 169.5 199 50.8
HPP92_017154 Vanilla planifolia HOM05D003450 ORTHO05D004150 8.9e-40 168.3 321 34.9
Atru.chr6.2426 Acer truncatum HOM05D003450 ORTHO05D004150 1.1e-37 161.4 182 51.6
Mapoly0097s0078 Marchantia polymorpha HOM05D003450 ORTHO05D004150 5.6e-34 149.1 337 33.2
AagrBONN_evm.TU.Sc2ySwM_344.991 Anthoceros agrestis HOM05D003450 ORTHO05D004150 3.6e-33 146.4 332 35.2
COL.COLO4_29171 Corchorus olitorius HOM05D003450 ORTHO05D004150 1.1e-32 144.8 270 38.9
Pp3c3_27420 Physcomitrium patens HOM05D003450 ORTHO05D004150 2.2e-30 137.1 322 34.2
Gohir.D04G058400 Gossypium hirsutum HOM05D003450 ORTHO05D004150 7.1e-29 132.1 158 50.6
Cpa.g.sc108.76 Carica papaya HOM05D003450 ORTHO05D004150 1.6e-28 131.0 155 49.0
MBI14_g31103_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 2.5e-26 123.6 248 37.1
Gohir.D04G058450 Gossypium hirsutum HOM05D003450 ORTHO05D004150 1.8e-24 117.5 107 57.9
CSS0015164 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 3.1e-24 116.7 104 58.7
SMO367G1196 Selaginella moellendorffii HOM05D003450 ORTHO05D004150 5.2e-24 115.9 327 30.9
CDE02G4242 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 7.6e-23 112.1 289 29.8
Atru.chr6.2427 Acer truncatum HOM05D003450 ORTHO05D004150 5.1e-19 99.4 93 58.1
CiPaw.03G045400 Carya illinoinensis HOM05D003450 ORTHO05D004150 8.7e-19 98.6 77 68.8
Actinidia28359 Actinidia chinensis HOM05D003450 ORTHO05D004150 6.2e-17 92.4 101 53.5
Aqoxy2G03587 Aquilegia oxysepala HOM05D003450 ORTHO05D004150 3.9e-11 73.2 86 47.7
BcaC03g17544 Brassica carinata HOM05D003450 ORTHO05D004150 3.9e-11 73.2 100 44.0
CDE09G0700 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 6.7e-11 72.4 156 30.8
Hma1.2p1_0035F.1_g022380 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 1.5e-10 71.2 44 77.3
Actinidia14585 Actinidia chinensis HOM05D003450 ORTHO05D004150 7.4e-10 68.9 44 79.5
CDE09G0158 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 6.2e-09 65.9 104 41.3
CAN.G1274.36 Capsicum annuum HOM05D003450 ORTHO05D004150 6.9e-08 62.4 46 65.2
MCO05G130 Micromonas commoda HOM05D003450 ORTHO05D004150 2.9e-06 57.0 189 25.4


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