Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0171201 Rosa chinensis HOM05D008183 ORTHO05D007254 6.0e-94 347.4 168 100.0
Rhsim13G0004500 Rhododendron simsii HOM05D008183 ORTHO05D007254 7.5e-12 74.7 150 32.7
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 2.2e-11 73.2 150 32.0
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.2e-11 73.2 150 32.0
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.4e-10 70.5 152 30.9
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.2e-09 67.4 136 31.6
Rhsim03G0017000 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.3e-08 63.2 123 31.7
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.5e-07 59.7 138 23.9
Rhsim02G0203700 Rhododendron simsii HOM05D000001 ORTHO05D009494 7.3e-07 58.2 137 30.7
SHI43481 Sapria himalayana HOM05D004990 ORTHO05D000022 9.5e-07 57.8 148 29.7
SHI49810 Sapria himalayana HOM05D004990 ORTHO05D000022 9.5e-07 57.8 148 29.7
SHI41297 Sapria himalayana HOM05D004990 ORTHO05D000022 1.2e-06 57.4 148 29.7
Aqoxy3G02220 Aquilegia oxysepala HOM05D009330 ORTHO05D001026 1.6e-06 57.0 161 29.2
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.6e-06 57.0 152 27.6
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.8e-06 56.2 138 28.3
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 6.2e-06 55.1 118 30.5
FvH4_4g06793 Fragaria vesca HOM05D000003 ORTHO05D000004 6.2e-06 55.1 157 27.4
SHI50070 Sapria himalayana HOM05D004990 ORTHO05D000022 8.0e-06 54.7 148 29.1


User provided reference genes

Program Settings