Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0170291 Rosa chinensis HOM05D005581 ORTHO05D006792 1.4e-119 433.0 211 100.0
FvH4_6g50030 Fragaria vesca HOM05D005581 ORTHO05D006792 5.8e-102 374.4 208 88.5
FAN05G2284 Fragaria x ananassa HOM05D005581 ORTHO05D006792 5.8e-102 374.4 211 87.7
FAN09G0871 Fragaria x ananassa HOM05D005581 ORTHO05D006792 4.1e-100 368.2 203 88.2
FAN14G0942 Fragaria x ananassa HOM05D005581 ORTHO05D006792 2.0e-99 365.9 200 89.0
Prupe.3G278300 Prunus persica HOM05D005581 ORTHO05D006792 2.3e-95 352.4 210 82.9
MD17G1040700 Malus domestica HOM05D005581 ORTHO05D006792 1.2e-88 330.1 209 78.5
GSVIVG01032543001 Vitis vinifera HOM05D005581 ORTHO05D006792 2.1e-83 312.8 187 80.2
Potri.001G470300 Populus trichocarpa HOM05D005581 ORTHO05D006792 3.9e-82 308.5 179 80.4
QL02p078462 Quercus lobata HOM05D005581 ORTHO05D006792 5.6e-81 304.7 203 73.9
Manes.15G178800 Manihot esculenta HOM05D005581 ORTHO05D006792 9.6e-81 303.9 196 76.5
Cfa007475 Carpinus fangiana HOM05D005581 ORTHO05D006792 2.1e-80 302.8 210 70.5
Dinv33676 Davidia involucrata HOM05D005581 ORTHO05D006792 6.2e-80 301.2 187 75.9
Nn3g17019 Nelumbo nucifera HOM05D005581 ORTHO05D006792 1.8e-79 299.7 175 79.4
Lalb_Chr05g0228941 Lupinus albus HOM05D005581 ORTHO05D006792 5.2e-79 298.1 188 73.9
Medtr7g030020 Medicago truncatula HOM05D005581 ORTHO05D006792 1.2e-78 297.0 211 67.3
Medtr7g038730 Medicago truncatula HOM05D005581 ORTHO05D006792 1.2e-78 297.0 211 67.3
Sabra16G0319200 Salix brachista HOM05D005581 ORTHO05D006792 1.5e-78 296.6 179 78.2
Eucgr.J02171 Eucalyptus grandis HOM05D005581 ORTHO05D006792 2.0e-78 296.2 175 77.7
TAR629G0716 Trochodendron aralioides HOM05D005581 ORTHO05D006792 2.6e-78 295.8 208 68.3
TPR.G39154 Trifolium pratense HOM05D005581 ORTHO05D006792 3.4e-78 295.4 188 72.9
CiPaw.04G022300 Carya illinoinensis HOM05D005581 ORTHO05D006792 4.4e-78 295.0 210 68.6
Hund12510 Selenicereus undatus HOM05D005581 ORTHO05D006792 9.9e-78 293.9 172 79.1
PGR083G1021 Punica granatum HOM05D005581 ORTHO05D006792 3.8e-77 292.0 202 71.3
Phvul.003G125600 Phaseolus vulgaris HOM05D005581 ORTHO05D006792 4.9e-77 291.6 177 74.6
Nitab4.5_0004905g0030 Nicotiana tabacum HOM05D000793 ORTHO05D006792 8.4e-77 290.8 182 74.7
VMungo1215G0614 Vigna mungo HOM05D005581 ORTHO05D006792 1.1e-76 290.4 185 71.9
Lj2g0014392 Lotus japonicus HOM05D005581 ORTHO05D006792 1.4e-76 290.0 199 71.4
Nitab4.5_0007185g0080 Nicotiana tabacum HOM05D005581 ORTHO05D006792 1.4e-76 290.0 187 73.3
Actinidia36059 Actinidia chinensis HOM05D005581 ORTHO05D006792 1.9e-76 289.7 179 76.0
SHI25585 Sapria himalayana HOM05D005581 ORTHO05D006792 2.4e-76 289.3 181 74.6
CSS0034562 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 3.2e-76 288.9 194 70.6
CSS0041908 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 3.2e-76 288.9 194 70.6
Cpa.g.sc14.80 Carica papaya HOM05D005581 ORTHO05D006792 3.2e-76 288.9 210 67.1
Ca_19611_v3 Cicer arietinum L. HOM05D005581 ORTHO05D006792 5.4e-76 288.1 178 75.3
CsaV3_5G037490 Cucumis sativus L. HOM05D005581 ORTHO05D006792 7.1e-76 287.7 202 67.8
Lalb_Chr21g0319231 Lupinus albus HOM05D005581 ORTHO05D006792 7.1e-76 287.7 203 67.5
Hma1.2p1_1975F.1_g309690 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 9.3e-76 287.3 205 69.8
PSO591G0467 Papaver somniferum HOM05D005581 ORTHO05D006792 9.3e-76 287.3 196 69.9
Ciclev10012718m.g Citrus clementina HOM05D005581 ORTHO05D006792 1.2e-75 287.0 210 66.7
arahy.Tifrunner.gnm1.ann1.2M0NJC Arachis hypogaea HOM05D005581 ORTHO05D006792 2.1e-75 286.2 212 64.6
arahy.Tifrunner.gnm1.ann1.E9CGF1 Arachis hypogaea HOM05D005581 ORTHO05D006792 2.1e-75 286.2 212 65.1
PSO832G0275 Papaver somniferum HOM05D005581 ORTHO05D006792 2.7e-75 285.8 173 74.0
MELO3C033644.2 Cucumis melo HOM05D005581 ORTHO05D006792 4.6e-75 285.0 202 67.8
Lj2g0006948 Lotus japonicus HOM05D005581 ORTHO05D006792 7.8e-75 284.3 172 76.7
Glyma.13G116200 Glycine max HOM05D005581 ORTHO05D006792 1.0e-74 283.9 196 67.3
PGSC0003DMG400001392 Solanum tuberosum HOM05D005581 ORTHO05D006792 1.0e-74 283.9 204 66.7
Actinidia06044 Actinidia chinensis HOM05D005581 ORTHO05D006792 1.3e-74 283.5 179 74.3
RhsimUnG0168100 Rhododendron simsii HOM05D005581 ORTHO05D006792 1.3e-74 283.5 169 76.3
CAN.G206.63 Capsicum annuum HOM05D005581 ORTHO05D006792 1.7e-74 283.1 203 67.5
PSO063G2781 Papaver somniferum HOM05D005581 ORTHO05D006792 2.3e-74 282.7 179 70.4
Aqoxy3G03110 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 3.9e-74 282.0 201 66.7
Peaxi162Scf00129g00828 Petunia axillaris HOM05D000793 ORTHO05D000783 3.9e-74 282.0 181 73.5
Sed0016453 Sechium edule HOM05D005581 ORTHO05D006792 3.9e-74 282.0 201 67.2
Duzib187G0556 Durio zibethinus HOM05D005581 ORTHO05D006792 5.1e-74 281.6 179 74.3
Sopen02g032000 Solanum pennellii HOM05D005581 ORTHO05D006792 5.1e-74 281.6 204 66.2
Ciclev10016724m.g Citrus clementina HOM05D005581 ORTHO05D006792 6.6e-74 281.2 193 70.5
Solyc02g087250.4 Solanum lycopersicum HOM05D000793 ORTHO05D000783 8.7e-74 280.8 204 66.2
MSTRG.23979 Avicennia marina HOM05D005581 ORTHO05D006792 1.1e-73 280.4 211 65.4
COL.COLO4_06153 Corchorus olitorius HOM05D000793 ORTHO05D000783 1.9e-73 279.6 199 67.8
Sc06g0002610 Simmondsia chinensis HOM05D005581 ORTHO05D006792 1.9e-73 279.6 195 69.7
Thecc.04G002800 Theobroma cacao HOM05D005581 ORTHO05D006792 1.9e-73 279.6 212 67.0
Hma1.2p1_0375F.1_g139010 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 3.3e-73 278.9 187 70.1
MBI15_g35865_MAGBIO Magnolia biondii HOM05D005581 ORTHO05D006792 4.3e-73 278.5 193 68.9
TWI12G0742 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 7.3e-73 277.7 190 72.1
CDE06G0044 Ceratophyllum demersum HOM05D005581 ORTHO05D006792 9.6e-73 277.3 169 73.4
Gohir.D07G224600 Gossypium hirsutum HOM05D005581 ORTHO05D006792 9.6e-73 277.3 191 69.1
Gorai.001G259000 Gossypium raimondii HOM05D005581 ORTHO05D006792 9.6e-73 277.3 174 72.4
Oeu031508.1 Olea europaea HOM05D005581 ORTHO05D006792 1.3e-72 276.9 204 67.2
Atru.BG.224.p Acer truncatum HOM05D005581 ORTHO05D006792 1.6e-72 276.6 165 78.2
Duzib147G0516 Durio zibethinus HOM05D005581 ORTHO05D006792 2.1e-72 276.2 194 69.1
Gohir.A07G217500 Gossypium hirsutum HOM05D005581 ORTHO05D006792 2.8e-72 275.8 191 68.6
arahy.Tifrunner.gnm1.ann1.B679M5 Arachis hypogaea HOM05D005581 ORTHO05D006792 6.2e-72 274.6 199 65.3
arahy.Tifrunner.gnm1.ann1.UYM2HQ Arachis hypogaea HOM05D005581 ORTHO05D006792 6.2e-72 274.6 174 71.8
Aqoxy3G03108 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 8.1e-72 274.2 166 76.5
Gohir.A05G361700 Gossypium hirsutum HOM05D005581 ORTHO05D006792 8.1e-72 274.2 192 68.2
ClCG00G001710 Citrullus lanatus HOM05D005581 ORTHO05D006792 1.1e-71 273.9 215 63.7
ClCG09G018630 Citrullus lanatus HOM05D005581 ORTHO05D006792 1.1e-71 273.9 215 63.7
SGA_v2.0_scaffold135G34832 Striga asiatica HOM05D005581 ORTHO05D006792 1.1e-71 273.9 203 68.5
ATR0624G029 Amborella trichopoda HOM05D005581 ORTHO05D006792 1.4e-71 273.5 195 65.1
Oeu062376.1 Olea europaea HOM05D005581 ORTHO05D006792 1.8e-71 273.1 188 70.2
Gohir.D04G052800 Gossypium hirsutum HOM05D005581 ORTHO05D006792 2.4e-71 272.7 177 71.2
Gorai.012G059200 Gossypium raimondii HOM05D005581 ORTHO05D006792 5.3e-71 271.6 177 70.6
Psat3g165640 Pisum sativum HOM05D005581 ORTHO05D006792 5.3e-71 271.6 200 65.0
AL3G42310 Arabidopsis lyrata HOM05D005581 ORTHO05D006792 9.0e-71 270.8 182 71.4
ECA240G2828 Erigeron canadensis HOM05D005581 ORTHO05D006792 1.5e-70 270.0 193 65.3
EL10Ac7g18001 Beta vulgaris HOM05D005581 ORTHO05D006792 2.0e-70 269.6 199 66.8
SalBow1G8695 Salvia bowleyana HOM05D005581 ORTHO05D006792 2.0e-70 269.6 200 65.0
DCAR_003657 Daucus carota HOM05D005581 ORTHO05D006792 9.9e-70 267.3 169 72.8
Lsat_1_v5_gn_0_16520 Lactuca sativa HOM05D005581 ORTHO05D006792 9.9e-70 267.3 204 62.3
AUR62022121 Chenopodium quinoa HOM05D005581 ORTHO05D006792 1.3e-69 266.9 178 71.3
Carub.0003s2629 Capsella rubella HOM05D005581 ORTHO05D006792 1.7e-69 266.5 175 72.6
AUR62001208 Chenopodium quinoa HOM05D005581 ORTHO05D006792 2.9e-69 265.8 194 67.0
Migut.H00163 Erythranthe guttata HOM05D005581 ORTHO05D006792 2.9e-69 265.8 191 67.0
MD09G1040100 Malus domestica HOM05D005581 ORTHO05D006792 3.8e-69 265.4 313 50.2
CARHR102620 Cardamine hirsuta HOM05D005581 ORTHO05D006792 4.9e-69 265.0 174 72.4
HPP92_026859 Vanilla planifolia HOM05D005581 ORTHO05D006792 1.9e-68 263.1 166 69.9
AT2G04690 Arabidopsis thaliana HOM05D005581 ORTHO05D006792 3.2e-68 262.3 173 71.7
Zm00001eb279970 Zea mays HOM05D005581 ORTHO05D006792 4.2e-68 261.9 166 68.1
PSO832G2358 Papaver somniferum HOM05D005581 ORTHO05D006792 5.4e-68 261.5 184 65.2
Os06g0238300 Oryza sativa ssp. japonica HOM05D005581 ORTHO05D006792 1.6e-67 260.0 166 68.1
Thhalv10027934m.g Eutrema salsugineum HOM05D005581 ORTHO05D006792 4.6e-67 258.5 177 68.4
Hund20033 Selenicereus undatus HOM05D005581 ORTHO05D006792 1.7e-66 256.5 200 64.0
Sp7g01930 Schrenkiella parvula HOM05D005581 ORTHO05D006792 2.3e-66 256.1 173 68.2
THA.LOC104823921 Tarenaya hassleriana HOM05D005581 ORTHO05D006792 1.1e-65 253.8 207 62.3
DCAR_011192 Daucus carota HOM05D005581 ORTHO05D006792 1.5e-65 253.4 197 65.0
EL10Ac7g18000 Beta vulgaris HOM05D005581 ORTHO05D006792 9.6e-65 250.8 205 62.4
SEGI_16176 Sequoiadendron giganteum HOM05D005581 ORTHO05D006792 6.2e-64 248.1 168 66.1
BcaB06g27424 Brassica carinata HOM05D005581 ORTHO05D006792 1.4e-63 246.9 211 58.8
TWI12G0286 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 2.0e-62 243.0 198 64.6
A04p12950 Brassica napus HOM05D005581 ORTHO05D006792 2.6e-62 242.7 168 67.9
BraA04t16955Z Brassica rapa HOM05D005581 ORTHO05D006792 2.6e-62 242.7 168 67.9
C04p46650 Brassica napus HOM05D005581 ORTHO05D006792 3.4e-62 242.3 168 67.9
BolC4t26253H Brassica oleracea HOM05D005581 ORTHO05D006792 3.4e-62 242.3 168 67.9
vmacro05787 Vaccinium macrocarpon HOM05D005581 ORTHO05D006792 2.9e-61 239.2 153 72.5
Lj7A408G12 Lonicera japonica HOM05D005581 ORTHO05D006792 3.8e-61 238.8 146 73.3
AagrBONN_evm.TU.Sc2ySwM_368.1768 Anthoceros agrestis HOM05D005581 ORTHO05D006792 3.1e-55 219.2 188 58.0
Psat3g011960 Pisum sativum HOM05D005581 ORTHO05D006792 4.5e-54 215.3 139 73.4
SMO356G0730 Selaginella moellendorffii HOM05D005581 ORTHO05D006792 1.3e-53 213.8 187 56.1
Atru.chr8.2410 Acer truncatum HOM05D005581 ORTHO05D006792 4.9e-53 211.8 129 73.6
Mapoly0035s0056 Marchantia polymorpha HOM05D005581 ORTHO05D006792 7.1e-52 208.0 167 56.3
Cc07_g02660 Coffea canephora HOM05D005581 ORTHO05D006792 1.6e-51 206.8 159 67.3
Aa31LG9G1540 Aethionema arabicum HOM05D005581 ORTHO05D006792 1.8e-50 203.4 162 64.2
Haze_14640 Corylus avellana HOM05D005581 ORTHO05D006792 3.3e-49 199.1 136 74.3
Pp3c1_40840 Physcomitrium patens HOM05D005581 ORTHO05D006792 3.4e-46 189.1 174 53.4
CBR_g36833 Chara braunii HOM05D005581 ORTHO05D006792 3.1e-39 166.0 169 47.3
PRCOL_00005184 Prasinoderma coloniale HOM05D005581 ORTHO05D006792 2.9e-37 159.5 169 45.0
MSTRG.21916 Avicennia marina HOM05D005581 ORTHO05D006792 2.7e-35 152.9 169 49.1
Migut.N00270 Erythranthe guttata HOM05D005581 ORTHO05D006792 1.8e-34 150.2 169 46.7
Migut.H00162 Erythranthe guttata HOM05D005581 ORTHO05D006792 4.8e-32 142.1 161 44.1
Cre10.g440700 Chlamydomonas reinhardtii HOM05D005581 ORTHO05D006792 5.3e-31 138.7 195 35.4
Migut.H00166 Erythranthe guttata HOM05D005581 ORTHO05D006792 1.2e-30 137.5 182 41.2
Glyma.17G043600 Glycine max HOM05D005581 ORTHO05D006792 1.6e-27 127.1 78 70.5
SalBow3G2496 Salvia bowleyana HOM05D005581 ORTHO05D006792 3.9e-26 122.5 169 42.0
PRCOL_00002387 Prasinoderma coloniale HOM05D005581 ORTHO05D006792 1.5e-20 104.0 167 36.5
HPP92_018422 Vanilla planifolia HOM05D005581 ORTHO05D006792 5.7e-17 92.0 63 58.7
CDE06G0755 Ceratophyllum demersum HOM05D005581 ORTHO05D006792 9.1e-15 84.7 67 61.2
HanXRQChr17g0548091 Helianthus annuus HOM05D005581 ORTHO05D006792 5.9e-14 82.0 53 69.8
MBI15_g46244_MAGBIO Magnolia biondii HOM05D005581 ORTHO05D006792 6.1e-11 72.0 41 80.5
arahy.Tifrunner.gnm1.ann1.C3UJQ4 Arachis hypogaea HOM05D005581 ORTHO05D006792 2.6e-09 66.6 71 47.9
SEGI_29649 Sequoiadendron giganteum HOM05D003731 ORTHO05D004429 4.1e-07 59.3 174 31.6


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