Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0170041 Rosa chinensis HOM05D008754 ORTHO05D013321 4.9e-81 304.3 140 100.0
FAN14G1080 Fragaria x ananassa HOM05D008754 ORTHO05D013321 3.4e-26 122.1 130 47.7
FvH4_6g49870 Fragaria vesca HOM05D008754 ORTHO05D013321 2.2e-25 119.4 133 46.6
FvH4_6g49880 Fragaria vesca HOM05D008754 ORTHO05D013321 2.2e-25 119.4 133 46.6
FAN13G0543 Fragaria x ananassa HOM05D008754 ORTHO05D013321 6.4e-25 117.9 139 47.5
FvH4_5g26960 Fragaria vesca HOM05D008754 ORTHO05D013321 8.4e-25 117.5 139 47.5
FAN12G2900 Fragaria x ananassa HOM05D008754 ORTHO05D013321 8.4e-25 117.5 120 53.3
FvH4_4g04530 Fragaria vesca HOM05D008754 ORTHO05D013321 5.5e-24 114.8 120 52.5
FAN02G1481 Fragaria x ananassa HOM05D008754 ORTHO05D035449 1.1e-21 107.1 80 58.8
FvH4_6g48861 Fragaria vesca HOM05D008754 ORTHO05D035449 1.5e-21 106.7 75 61.3
FAN05G0612 Fragaria x ananassa HOM05D008754 ORTHO05D035449 1.5e-21 106.7 87 56.3
FvH4_5g26990 Fragaria vesca HOM05D008754 ORTHO05D013321 7.4e-21 104.4 91 54.9
FvH4_1g02310 Fragaria vesca HOM05D008754 ORTHO05D029566 9.6e-21 104.0 113 48.7
FvH4_6g19630 Fragaria vesca HOM05D008754 ORTHO05D029566 1.4e-16 90.1 83 53.0
FAN05G0409 Fragaria x ananassa HOM05D008754 ORTHO05D013321 9.3e-16 87.4 64 57.8
FAN02G4357 Fragaria x ananassa HOM05D008754 ORTHO05D013321 7.9e-15 84.3 64 59.4
RcHm_v2.0_Chr5g0038691 Rosa chinensis HOM05D014182 ORTHO05D017018 7.9e-15 84.3 58 60.3
FAN02G2204 Fragaria x ananassa HOM05D008754 ORTHO05D029566 5.1e-14 81.6 66 54.5
FAN02G4257 Fragaria x ananassa HOM05D008754 ORTHO05D029566 5.1e-14 81.6 66 54.5
FvH4_6g49020 Fragaria vesca HOM05D008754 ORTHO05D046512 8.7e-14 80.9 104 45.2
FAN14G2320 Fragaria x ananassa HOM05D008754 ORTHO05D035536 8.7e-14 80.9 104 45.2
FAN02G0077 Fragaria x ananassa HOM05D008754 ORTHO05D013321 1.5e-13 80.1 70 52.9
FAN09G4820 Fragaria x ananassa HOM05D008754 ORTHO05D046512 3.3e-13 79.0 98 45.9
FAN22G1148 Fragaria x ananassa HOM05D008754 ORTHO05D013321 3.3e-13 79.0 105 47.6
FvH4_6g01091 Fragaria vesca HOM05D008754 ORTHO05D045983 4.3e-13 78.6 80 42.5
FvH4_6g38111 Fragaria vesca HOM05D014182 ORTHO05D017018 4.3e-13 78.6 74 43.2
FAN05G0740 Fragaria x ananassa HOM05D008754 ORTHO05D013321 5.7e-13 78.2 87 46.0
FvH4_6g49060 Fragaria vesca HOM05D008754 ORTHO05D025422 7.4e-13 77.8 123 38.2
FAN14G0439 Fragaria x ananassa HOM05D008754 ORTHO05D025422 7.4e-13 77.8 123 38.2
FAN05G3012 Fragaria x ananassa HOM05D008754 ORTHO05D045983 9.6e-13 77.4 82 46.3
RcHm_v2.0_Chr2g0151231 Rosa chinensis HOM05D014182 ORTHO05D017018 1.3e-12 77.0 96 39.6
RcHm_v2.0_Chr2g0151321 Rosa chinensis HOM05D014182 ORTHO05D017018 1.6e-12 76.6 69 46.4
FvH4_6g49040 Fragaria vesca HOM05D008754 ORTHO05D025422 2.1e-12 76.3 123 37.4
FAN09G2670 Fragaria x ananassa HOM05D008754 ORTHO05D025422 2.1e-12 76.3 123 38.2
FAN14G3471 Fragaria x ananassa HOM05D008754 ORTHO05D035536 2.8e-12 75.9 104 43.3
FAN17G2983 Fragaria x ananassa HOM05D008754 ORTHO05D013321 2.8e-12 75.9 77 50.6
FAN02G1648 Fragaria x ananassa HOM05D008754 ORTHO05D025422 3.7e-12 75.5 123 39.0
FAN12G1812 Fragaria x ananassa HOM05D008754 ORTHO05D013321 3.7e-12 75.5 87 50.6
RcHm_v2.0_Chr5g0038581 Rosa chinensis HOM05D014182 ORTHO05D017018 1.4e-11 73.6 58 55.2
RcHm_v2.0_Chr2g0151211 Rosa chinensis HOM05D014182 ORTHO05D017018 1.5e-10 70.1 69 43.5
RcHm_v2.0_Chr2g0151281 Rosa chinensis HOM05D014182 ORTHO05D017018 1.5e-10 70.1 69 43.5
FvH4_6g49070 Fragaria vesca HOM05D008754 ORTHO05D035536 4.5e-10 68.6 68 45.6
FAN02G3314 Fragaria x ananassa HOM05D008754 ORTHO05D013321 1.7e-09 66.6 86 45.3
RcHm_v2.0_Chr6g0246181 Rosa chinensis HOM05D014182 ORTHO05D341309 2.2e-09 66.2 66 43.9
FvH4_1g02340 Fragaria vesca HOM05D034781 ORTHO05D196816 1.8e-06 56.6 123 36.6
RcHm_v2.0_Chr5g0013591 Rosa chinensis HOM05D017196 ORTHO05D026743 6.7e-06 54.7 54 44.4


User provided reference genes

Program Settings