Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0169181 Rosa chinensis HOM05D008333 ORTHO05D010371 5.3e-90 334.3 168 100.0
RcHm_v2.0_Chr2g0169171 Rosa chinensis HOM05D008333 ORTHO05D010371 4.0e-74 281.6 169 87.0
FvH4_6g49320 Fragaria vesca HOM05D008333 ORTHO05D010371 3.8e-64 248.4 174 78.7
FAN14G5614 Fragaria x ananassa HOM05D008333 ORTHO05D010371 3.8e-64 248.4 174 78.7
FvH4_6g49300 Fragaria vesca HOM05D008333 ORTHO05D010371 8.4e-64 247.3 174 76.4
FAN14G1695 Fragaria x ananassa HOM05D008333 ORTHO05D010371 2.7e-62 242.3 174 75.3
FAN14G3781 Fragaria x ananassa HOM05D000349 ORTHO05D001782 3.5e-62 241.9 173 75.1
FAN02G4458 Fragaria x ananassa HOM05D008333 ORTHO05D010371 8.5e-40 167.5 174 58.6
Prupe.3G272200 Prunus persica HOM05D008333 ORTHO05D010371 1.8e-37 159.8 169 49.7
Potri.017G077100 Populus trichocarpa HOM05D008333 ORTHO05D010371 2.2e-24 116.3 140 45.0
Cfa021167 Carpinus fangiana HOM05D008333 ORTHO05D010371 4.0e-21 105.5 143 39.2
Haze_14585 Corylus avellana HOM05D008333 ORTHO05D010371 4.0e-21 105.5 133 41.4
QL02p080535 Quercus lobata HOM05D008333 ORTHO05D010371 5.2e-21 105.1 137 38.7
COL.COLO4_25183 Corchorus olitorius HOM05D008333 ORTHO05D010371 3.1e-18 95.9 143 35.7
CiPaw.03G030300 Carya illinoinensis HOM05D008333 ORTHO05D010371 1.6e-17 93.6 116 39.7
Manes.17G020900 Manihot esculenta HOM05D008333 ORTHO05D010371 2.0e-17 93.2 129 39.5
Cfa007508 Carpinus fangiana HOM05D008333 ORTHO05D010371 3.5e-17 92.4 152 34.2
CSS0029447 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 4.5e-17 92.0 130 35.4
CSS0048142 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 4.5e-17 92.0 130 35.4
Duzib147G0630 Durio zibethinus HOM05D008333 ORTHO05D010371 1.1e-15 87.4 138 32.6
VMungo0464G0738 Vigna mungo HOM05D008333 ORTHO05D010371 5.6e-15 85.1 142 35.2
Gorai.006G024100 Gossypium raimondii HOM05D008333 ORTHO05D010371 7.3e-15 84.7 145 31.7
Phvul.004G025900 Phaseolus vulgaris HOM05D008333 ORTHO05D010371 1.6e-14 83.6 134 32.1
Gohir.A09G021000 Gossypium hirsutum HOM05D008333 ORTHO05D010371 2.1e-14 83.2 141 31.9
Thecc.04G074300 Theobroma cacao HOM05D008333 ORTHO05D010371 2.3e-13 79.7 123 34.1
Glyma.18G255500 Glycine max HOM05D008333 ORTHO05D010371 4.0e-13 79.0 142 31.7
Lj7P401T71 Lonicera japonica HOM05D008333 ORTHO05D010371 1.2e-12 77.4 124 33.1
Gohir.D09G020400 Gossypium hirsutum HOM05D008333 ORTHO05D010371 1.3e-11 73.9 135 30.4
Gorai.006G023800 Gossypium raimondii HOM05D008333 ORTHO05D010371 4.9e-11 72.0 117 32.5
TPR.G7262 Trifolium pratense HOM05D008333 ORTHO05D010371 8.3e-11 71.2 148 30.4
CSS0005469 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 1.1e-10 70.9 135 31.1
Actinidia38746 Actinidia chinensis HOM05D008333 ORTHO05D010371 1.4e-10 70.5 135 29.6
Sopen04g006510 Solanum pennellii HOM05D008333 ORTHO05D010371 2.4e-10 69.7 101 32.7
TAR481G0008 Trochodendron aralioides HOM05D008333 ORTHO05D010371 2.4e-10 69.7 118 31.4
TAR481G0013 Trochodendron aralioides HOM05D008333 ORTHO05D010371 4.1e-10 68.9 118 31.4
Gohir.D11G275775 Gossypium hirsutum HOM05D008333 ORTHO05D010371 1.6e-09 67.0 118 30.5
Gorai.007G297900 Gossypium raimondii HOM05D008333 ORTHO05D010371 1.6e-09 67.0 118 30.5
Eucgr.I01914 Eucalyptus grandis HOM05D008333 ORTHO05D010371 2.7e-09 66.2 140 28.6
CSS0007512 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 3.5e-09 65.9 135 31.1
Eucgr.L02760 Eucalyptus grandis HOM05D008333 ORTHO05D010371 5.9e-09 65.1 140 27.9
Rhsim08G0065400 Rhododendron simsii HOM05D008333 ORTHO05D010371 5.9e-09 65.1 139 28.8
Rhsim08G0065700 Rhododendron simsii HOM05D008333 ORTHO05D010371 7.8e-09 64.7 132 30.3
Gohir.D09G020550 Gossypium hirsutum HOM05D008333 ORTHO05D010371 1.0e-08 64.3 105 35.2
PGSC0003DMG400016257 Solanum tuberosum HOM05D008333 ORTHO05D010371 1.3e-08 63.9 127 30.7
Rhsim08G0065800 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.7e-08 63.5 118 29.7
Rhsim08G0065600 Rhododendron simsii HOM05D008333 ORTHO05D010371 3.0e-08 62.8 138 29.0
Rhsim08G0065200 Rhododendron simsii HOM05D008333 ORTHO05D010371 5.0e-08 62.0 138 28.3
Rhsim08G0065300 Rhododendron simsii HOM05D008333 ORTHO05D010371 6.6e-08 61.6 119 29.4
Rhsim08G0065000 Rhododendron simsii HOM05D008333 ORTHO05D010371 8.6e-08 61.2 138 29.0
MBI03_g32214_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 1.1e-07 60.8 124 32.3
Lsat_1_v5_gn_4_179800 Lactuca sativa HOM05D019919 ORTHO05D010371 5.6e-07 58.5 109 30.3
TAR371G0090 Trochodendron aralioides HOM05D008333 ORTHO05D010371 7.3e-07 58.2 105 31.4
MBI03_g35364_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 1.2e-06 57.4 118 33.9
Nn3g17126 Nelumbo nucifera HOM05D008333 ORTHO05D010371 1.6e-06 57.0 131 27.5
MBI05_g05683_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 3.6e-06 55.8 114 36.0
Nn4g23042 Nelumbo nucifera HOM05D008333 ORTHO05D010371 6.2e-06 55.1 103 30.1


User provided reference genes

Program Settings