Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0168161 Rosa chinensis HOM05D000248 ORTHO05D000146 9.8e-29 129.4 64 100.0
RcHm_v2.0_Chr6g0255241 Rosa chinensis HOM05D000248 ORTHO05D000146 4.4e-13 77.4 62 61.3
RcHm_v2.0_Chr3g0450281 Rosa chinensis HOM05D000248 ORTHO05D000146 1.7e-12 75.5 62 61.3
RcHm_v2.0_Chr3g0450261 Rosa chinensis HOM05D000248 ORTHO05D000146 1.1e-11 72.8 62 58.1
FAN14G2708 Fragaria x ananassa HOM05D000248 ORTHO05D000146 3.0e-09 64.7 60 55.0
FAN09G3355 Fragaria x ananassa HOM05D000248 ORTHO05D000146 3.9e-09 64.3 47 63.8
FAN05G1446 Fragaria x ananassa HOM05D000248 ORTHO05D000146 4.3e-08 60.8 47 61.7
FAN05G5517 Fragaria x ananassa HOM05D000248 ORTHO05D000146 4.3e-08 60.8 56 55.4
FAN05G5522 Fragaria x ananassa HOM05D000248 ORTHO05D000146 5.6e-08 60.5 65 52.3
FAN14G5904 Fragaria x ananassa HOM05D000248 ORTHO05D000146 5.6e-08 60.5 50 62.0
FAN09G1542 Fragaria x ananassa HOM05D000248 ORTHO05D000146 7.3e-08 60.1 50 62.0
FAN02G1553 Fragaria x ananassa HOM05D000248 ORTHO05D000146 9.5e-08 59.7 50 60.0
FvH4_6g01090 Fragaria vesca HOM05D000248 ORTHO05D000146 1.2e-07 59.3 50 60.0
QL11p031926 Quercus lobata HOM05D000248 ORTHO05D000146 1.2e-07 59.3 61 52.5
CSS0033453 Camellia sinensis var. sinensis HOM05D000248 ORTHO05D000146 2.1e-07 58.5 63 46.0
FAN12G0734 Fragaria x ananassa HOM05D000248 ORTHO05D000146 2.1e-07 58.5 50 62.0
MD12G1255500 Malus domestica HOM05D000248 ORTHO05D000146 2.8e-07 58.2 46 60.9
Prupe.6G356300 Prunus persica HOM05D000248 ORTHO05D000146 3.6e-07 57.8 48 62.5
Dinv41282 Davidia involucrata HOM05D000248 ORTHO05D000146 8.1e-07 56.6 58 46.6
Ciclev10013632m.g Citrus clementina HOM05D000248 ORTHO05D000146 1.4e-06 55.8 61 50.8
Hma1.2p1_0123F.1_g058070 Hydrangea macrophylla HOM05D000248 ORTHO05D000146 1.4e-06 55.8 63 42.9
Manes.18G077300 Manihot esculenta HOM05D000248 ORTHO05D000146 1.8e-06 55.5 46 58.7
RcHm_v2.0_Chr3g0448621 Rosa chinensis HOM05D000248 ORTHO05D000146 2.3e-06 55.1 50 58.0
Duzib128G1684 Durio zibethinus HOM05D000248 ORTHO05D000146 4.0e-06 54.3 57 54.4
MD04G1236300 Malus domestica HOM05D000248 ORTHO05D000146 6.8e-06 53.5 48 56.2
HanXRQChr05g0156951 Helianthus annuus HOM05D000248 ORTHO05D000146 8.9e-06 53.1 61 41.0
Sed0002591 Sechium edule HOM05D000248 ORTHO05D000146 8.9e-06 53.1 62 46.8


User provided reference genes

Program Settings