Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0167681 Rosa chinensis HOM05D008847 ORTHO05D000368 5.5e-53 210.7 106 100.0
RcHm_v2.0_Chr2g0167641 Rosa chinensis HOM05D000576 ORTHO05D000368 1.2e-26 123.2 91 70.3
RcHm_v2.0_Chr2g0167551 Rosa chinensis HOM05D000576 ORTHO05D000368 4.6e-23 111.3 91 65.9
RcHm_v2.0_Chr2g0167601 Rosa chinensis HOM05D000576 ORTHO05D000368 8.6e-22 107.1 91 64.8
RcHm_v2.0_Chr2g0168251 Rosa chinensis HOM05D000576 ORTHO05D000368 1.1e-19 100.1 92 57.6
FvH4_6g47821 Fragaria vesca HOM05D000576 ORTHO05D000368 1.5e-18 96.3 93 57.0
FAN14G2376 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.8e-18 94.4 92 59.8
FAN09G2824 Fragaria x ananassa HOM05D000576 ORTHO05D000368 7.5e-18 94.0 101 56.4
FvH4_6g48330 Fragaria vesca HOM05D008847 ORTHO05D000368 9.8e-18 93.6 92 59.8
FAN14G3739 Fragaria x ananassa HOM05D000576 ORTHO05D000368 9.8e-18 93.6 93 55.9
FAN14G4345 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.7e-17 91.7 92 55.4
FAN05G2407 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.6e-15 84.7 90 52.2
RcHm_v2.0_Chr5g0047501 Rosa chinensis HOM05D008847 ORTHO05D000368 4.6e-15 84.7 92 51.1
FAN09G3072 Fragaria x ananassa HOM05D001529 ORTHO05D000368 1.3e-14 83.2 118 42.4
FvH4_6g48431 Fragaria vesca HOM05D008847 ORTHO05D000368 3.3e-13 78.6 73 57.5
FAN24G2401 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.8e-12 75.5 74 58.1
FvH4_6g48151 Fragaria vesca HOM05D000576 ORTHO05D000368 3.6e-12 75.1 88 48.9
FAN05G4147 Fragaria x ananassa HOM05D008847 ORTHO05D000368 4.0e-11 71.6 97 46.4
FAN09G3608 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.4e-10 68.2 98 43.9
FAN02G1311 Fragaria x ananassa HOM05D008847 ORTHO05D000368 7.6e-10 67.4 68 57.4
FAN09G4808 Fragaria x ananassa HOM05D008847 ORTHO05D000368 4.9e-09 64.7 68 54.4
FAN05G2544 Fragaria x ananassa HOM05D008847 ORTHO05D016304 6.4e-09 64.3 99 40.4
FAN05G3417 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.9e-08 62.8 92 44.6
FAN14G0812 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.9e-08 62.8 106 41.5
FvH4_7g25361 Fragaria vesca HOM05D008847 ORTHO05D000368 2.4e-08 62.4 93 41.9
RcHm_v2.0_Chr3g0476161 Rosa chinensis HOM05D000576 ORTHO05D000368 2.4e-08 62.4 98 40.8
FAN06G2118 Fragaria x ananassa HOM05D008847 ORTHO05D016304 3.2e-08 62.0 93 41.9
FAN05G3797 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.4e-08 61.2 108 42.6
Prupe.3G259800 Prunus persica HOM05D000576 ORTHO05D000368 2.1e-07 59.3 69 43.5
FAN03G0347 Fragaria x ananassa HOM05D008847 ORTHO05D000368 6.0e-07 57.8 104 40.4
FAN06G2140 Fragaria x ananassa HOM05D008847 ORTHO05D000368 6.0e-07 57.8 104 40.4
FAN06G3184 Fragaria x ananassa HOM05D008847 ORTHO05D000368 6.0e-07 57.8 104 40.4


User provided reference genes

Program Settings