Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0167571 Rosa chinensis HOM05D006569 ORTHO05D007515 5.7e-118 427.6 210 100.0
RcHm_v2.0_Chr2g0167491 Rosa chinensis HOM05D006569 ORTHO05D007515 6.1e-104 380.9 196 95.4
FAN05G0252 Fragaria x ananassa HOM05D006569 ORTHO05D007515 2.2e-101 372.5 196 93.4
FvH4_6g48150 Fragaria vesca HOM05D006569 ORTHO05D007515 4.8e-101 371.3 196 93.4
FAN02G1154 Fragaria x ananassa HOM05D006569 ORTHO05D007515 6.3e-101 370.9 196 92.9
FAN09G2200 Fragaria x ananassa HOM05D006569 ORTHO05D007515 2.7e-99 365.5 198 90.4
FAN14G1478 Fragaria x ananassa HOM05D006569 ORTHO05D007515 2.3e-98 362.5 196 91.3
Prupe.3G265200 Prunus persica HOM05D006569 ORTHO05D007515 4.6e-75 285.0 192 71.4
MD09G1053400 Malus domestica HOM05D006569 ORTHO05D007515 1.8e-71 273.1 191 69.6
FvH4_6g47953 Fragaria vesca HOM05D006569 ORTHO05D007515 4.6e-67 258.5 143 88.8
FAN05G1756 Fragaria x ananassa HOM05D006569 ORTHO05D007515 7.8e-67 257.7 140 90.0
Dinv33774 Davidia involucrata HOM05D006569 ORTHO05D007515 1.1e-65 253.8 194 62.9
QL02p053824 Quercus lobata HOM05D006569 ORTHO05D007515 5.6e-65 251.5 198 60.6
FAN09G3888 Fragaria x ananassa HOM05D006569 ORTHO05D007515 7.3e-65 251.1 154 83.8
GSVIVG01011442001 Vitis vinifera HOM05D006569 ORTHO05D007515 1.2e-64 250.4 199 58.8
Haze_14089 Corylus avellana HOM05D006569 ORTHO05D007515 5.2e-63 245.0 192 59.9
Potri.017G086000 Populus trichocarpa HOM05D006569 ORTHO05D007515 3.4e-62 242.3 194 62.4
Cfa007985 Carpinus fangiana HOM05D006569 ORTHO05D007515 9.9e-62 240.7 199 58.3
Sabra17G0075800 Salix brachista HOM05D006569 ORTHO05D007515 2.9e-61 239.2 196 60.2
CiPaw.04G004700 Carya illinoinensis HOM05D006569 ORTHO05D007515 3.8e-61 238.8 209 54.5
Manes.01G092900 Manihot esculenta HOM05D006569 ORTHO05D007515 6.4e-61 238.0 197 57.4
TAR371G0591 Trochodendron aralioides HOM05D006569 ORTHO05D007515 2.7e-59 232.6 191 57.6
Atru.chr8.291 Acer truncatum HOM05D006569 ORTHO05D007515 6.6e-58 228.0 198 57.6
CANSAT64G0455 Cannabis sativa HOM05D006569 ORTHO05D007515 1.9e-57 226.5 197 57.9
Duzib264G1306 Durio zibethinus HOM05D006569 ORTHO05D007515 4.3e-57 225.3 191 57.6
COL.COLO4_10330 Corchorus olitorius HOM05D006569 ORTHO05D007515 1.8e-55 219.9 194 53.6
Cpa.g.sc14.98 Carica papaya HOM05D006569 ORTHO05D007515 1.2e-54 217.2 192 54.2
CSS0028247 Camellia sinensis var. sinensis HOM05D006569 ORTHO05D007515 1.3e-53 213.8 194 54.1
THA.LOC104822352 Tarenaya hassleriana HOM05D006569 ORTHO05D007515 5.4e-52 208.4 206 50.5
TWI60G0939 Tripterygium wilfordii HOM05D006569 ORTHO05D007515 5.4e-52 208.4 178 57.3
Rhsim10G0036300 Rhododendron simsii HOM05D006569 ORTHO05D007515 7.1e-52 208.0 201 51.7
AL6G26150 Arabidopsis lyrata HOM05D006569 ORTHO05D007515 7.8e-51 204.5 194 51.0
Eucgr.I01955 Eucalyptus grandis HOM05D006569 ORTHO05D007515 3.0e-50 202.6 191 53.4
Solyc02g067200.4 Solanum lycopersicum HOM05D006569 ORTHO05D007515 3.9e-50 202.2 199 47.7
Sopen02g016380 Solanum pennellii HOM05D006569 ORTHO05D007515 3.9e-50 202.2 199 47.7
Ciclev10013587m.g Citrus clementina HOM05D006569 ORTHO05D007515 6.6e-50 201.4 175 57.1
PGSC0003DMG400025133 Solanum tuberosum HOM05D006569 ORTHO05D007515 6.6e-50 201.4 199 48.2
DCAR_021661 Daucus carota HOM05D006569 ORTHO05D007515 1.1e-49 200.7 206 46.1
Thhalv10012473m.g Eutrema salsugineum HOM05D006569 ORTHO05D007515 1.1e-49 200.7 191 51.8
Cc07_g03540 Coffea canephora HOM05D006569 ORTHO05D007515 1.5e-49 200.3 205 47.3
arahy.Tifrunner.gnm1.ann1.80L4ZA Arachis hypogaea HOM05D006569 ORTHO05D007515 2.5e-49 199.5 198 52.0
AUR62018101 Chenopodium quinoa HOM05D006569 ORTHO05D007515 2.5e-49 199.5 192 49.0
Carub.0006s1347 Capsella rubella HOM05D006569 ORTHO05D007515 3.3e-49 199.1 194 51.5
Nitab4.5_0003653g0010 Nicotiana tabacum HOM05D006569 ORTHO05D007515 3.3e-49 199.1 199 46.7
AUR62034434 Chenopodium quinoa HOM05D006569 ORTHO05D007515 4.3e-49 198.7 192 49.0
Aqoxy3G03442 Aquilegia oxysepala HOM05D006569 ORTHO05D007515 1.3e-48 197.2 201 50.2
AT5G15280 Arabidopsis thaliana HOM05D006569 ORTHO05D007515 1.3e-48 197.2 194 50.0
Nitab4.5_0000212g0030 Nicotiana tabacum HOM05D006569 ORTHO05D007515 3.6e-48 195.7 199 45.7
Peaxi162Scf00011g00263 Petunia axillaris HOM05D006569 ORTHO05D007515 6.2e-48 194.9 199 48.2
CAN.G1103.13 Capsicum annuum HOM05D006569 ORTHO05D007515 1.4e-47 193.7 200 47.5
EL10Ac2g03001 Beta vulgaris HOM05D006569 ORTHO05D007515 2.4e-47 193.0 195 47.2
Hund15592 Selenicereus undatus HOM05D006569 ORTHO05D007515 6.9e-47 191.4 193 48.7
CARHR198030 Cardamine hirsuta HOM05D006569 ORTHO05D007515 7.6e-46 188.0 194 49.5
Lju41C9T14 Lonicera japonica HOM05D006569 ORTHO05D007515 9.9e-46 187.6 177 52.5
BcaNung03317 Brassica carinata HOM05D006569 ORTHO05D007515 2.2e-45 186.4 194 49.0
Sp6g28790 Schrenkiella parvula HOM05D006569 ORTHO05D007515 2.2e-45 186.4 194 48.5
PSO013G0141 Papaver somniferum HOM05D006569 ORTHO05D007515 6.4e-45 184.9 194 50.0
Oeu010220.1 Olea europaea HOM05D006569 ORTHO05D007515 8.4e-45 184.5 202 43.6
SalBow6G2371 Salvia bowleyana HOM05D006569 ORTHO05D007515 1.1e-44 184.1 206 45.1
PSO832G0544 Papaver somniferum HOM05D006569 ORTHO05D007515 1.4e-44 183.7 194 49.0
Sc10g0003480 Simmondsia chinensis HOM05D006569 ORTHO05D007515 2.4e-44 183.0 192 46.4
MBI05_g10764_MAGBIO Magnolia biondii HOM05D006569 ORTHO05D007515 4.2e-44 182.2 203 44.3
Migut.K01310 Erythranthe guttata HOM05D006569 ORTHO05D007515 9.3e-44 181.0 191 45.0
CDE04G0154 Ceratophyllum demersum HOM05D006569 ORTHO05D007515 1.0e-42 177.6 197 46.7
PGR004G0299 Punica granatum HOM05D006569 ORTHO05D007515 3.0e-42 176.0 188 46.3
Aa31LG11G14260 Aethionema arabicum HOM05D006569 ORTHO05D007515 3.9e-42 175.6 180 50.0
ClCG09G010340 Citrullus lanatus HOM05D006569 ORTHO05D007515 1.9e-41 173.3 192 45.8
Lalb_Chr15g0081471 Lupinus albus HOM05D006569 ORTHO05D007515 9.6e-41 171.0 158 53.2
SGA_v2.0_scaffold236G43766 Striga asiatica HOM05D006569 ORTHO05D007515 9.6e-41 171.0 207 42.0
CsaV3_7G024320 Cucumis sativus L. HOM05D006569 ORTHO05D007515 1.6e-40 170.2 192 45.3
BraA02t05270Z Brassica rapa HOM05D006569 ORTHO05D007515 6.2e-40 168.3 195 45.1
BcaC03g13417 Brassica carinata HOM05D006569 ORTHO05D007515 8.1e-40 167.9 201 44.8
C02p07640 Brassica napus HOM05D006569 ORTHO05D007515 8.1e-40 167.9 201 44.8
BolC2t06696H Brassica oleracea HOM05D006569 ORTHO05D007515 8.1e-40 167.9 201 44.8
Lsat_1_v5_gn_2_89461 Lactuca sativa HOM05D006569 ORTHO05D007515 1.1e-39 167.5 196 43.9
MSTRG.15471 Avicennia marina HOM05D006569 ORTHO05D007515 1.2e-38 164.1 179 44.1
MELO3C023650.2 Cucumis melo HOM05D006569 ORTHO05D007515 1.2e-38 164.1 192 44.3
HPP92_012798 Vanilla planifolia HOM05D006569 ORTHO05D007515 2.0e-38 163.3 204 41.7
ECA238G4289 Erigeron canadensis HOM05D006569 ORTHO05D007515 4.5e-38 162.2 196 40.3
QL93p0100_0341 Quercus lobata HOM05D006569 ORTHO05D007515 5.8e-38 161.8 188 47.9
Sed0017024 Sechium edule HOM05D006569 ORTHO05D007515 7.6e-38 161.4 191 44.5
Ah.10g031720 Amaranthus hybridus HOM05D006569 ORTHO05D007515 8.4e-37 157.9 190 43.7
QL02p057930 Quercus lobata HOM05D006569 ORTHO05D007515 3.2e-36 156.0 188 46.3
A02p02990 Brassica napus HOM05D006569 ORTHO05D007515 4.6e-35 152.1 189 45.5
HanXRQChr07g0199321 Helianthus annuus HOM05D006569 ORTHO05D007515 7.9e-35 151.4 179 40.2
ATR1145G048 Amborella trichopoda HOM05D006569 ORTHO05D007515 5.7e-33 145.2 198 38.4
TPR.G33795 Trifolium pratense HOM05D006569 ORTHO05D007515 2.1e-32 143.3 145 46.2
VMungo0540G0528 Vigna mungo HOM05D006569 ORTHO05D007515 8.2e-32 141.4 103 63.1
Phvul.006G046500 Phaseolus vulgaris HOM05D006569 ORTHO05D007515 2.0e-30 136.7 103 62.1
Glyma.18G093100 Glycine max HOM05D006569 ORTHO05D007515 5.8e-30 135.2 103 61.2
Lj6g0009481 Lotus japonicus HOM05D006569 ORTHO05D007515 1.3e-29 134.0 108 59.3
Zm00001eb005280 Zea mays HOM05D006569 ORTHO05D007515 2.9e-29 132.9 199 32.7
Medtr3g053000 Medicago truncatula HOM05D006569 ORTHO05D007515 2.5e-28 129.8 104 56.7
Psat5g175080 Pisum sativum HOM05D006569 ORTHO05D007515 1.2e-27 127.5 103 54.4
Ca_14754_v3 Cicer arietinum L. HOM05D006569 ORTHO05D007515 1.6e-27 127.1 102 52.0
MBI05_g41591_MAGBIO Magnolia biondii HOM05D006569 ORTHO05D007515 5.1e-26 122.1 203 34.0
QL08p010038 Quercus lobata HOM05D006569 ORTHO05D007515 1.4e-20 104.0 202 34.2
ATR0974G001 Amborella trichopoda HOM05D006569 ORTHO05D007515 4.8e-16 89.0 104 43.3
Thecc.04G085800 Theobroma cacao HOM05D006569 ORTHO05D007515 5.3e-15 85.5 203 32.0
Glyma.08G319450 Glycine max HOM05D006569 ORTHO05D007515 5.9e-14 82.0 78 50.0
MBI05_g36424_MAGBIO Magnolia biondii HOM05D006569 ORTHO05D007515 5.5e-12 75.5 118 39.0
HPP92_012677 Vanilla planifolia HOM05D006569 ORTHO05D007515 2.0e-09 67.0 88 40.9


User provided reference genes

Program Settings