Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0166971 Rosa chinensis HOM05D004550 ORTHO05D005340 8.6e-131 470.3 235 100.0
FvH4_6g47773 Fragaria vesca HOM05D004550 ORTHO05D005340 2.6e-111 405.6 233 89.3
FAN05G1708 Fragaria x ananassa HOM05D004550 ORTHO05D005340 3.5e-108 395.2 227 89.4
FAN14G0263 Fragaria x ananassa HOM05D004550 ORTHO05D005340 4.0e-88 328.6 189 89.9
CANSAT64G2188 Cannabis sativa HOM05D004550 ORTHO05D005340 7.9e-76 287.7 236 63.1
Prupe.3G261900 Prunus persica HOM05D004550 ORTHO05D005340 3.0e-75 285.8 216 70.4
MD09G1057200 Malus domestica HOM05D004550 ORTHO05D005340 1.4e-69 266.9 216 68.1
Dinv34106 Davidia involucrata HOM05D004550 ORTHO05D005340 5.5e-69 265.0 233 61.8
Migut.L01230 Erythranthe guttata HOM05D004550 ORTHO05D005340 1.6e-68 263.5 234 59.8
GSVIVG01011473001 Vitis vinifera HOM05D004550 ORTHO05D005340 6.1e-68 261.5 235 60.4
CSS0021997 Camellia sinensis var. sinensis HOM05D004550 ORTHO05D005340 7.9e-68 261.2 234 59.8
Nn3g17356 Nelumbo nucifera HOM05D004550 ORTHO05D005340 7.9e-68 261.2 233 61.4
TAR629G0577 Trochodendron aralioides HOM05D004550 ORTHO05D005340 7.9e-68 261.2 232 59.9
CiPaw.06G089400 Carya illinoinensis HOM05D004550 ORTHO05D005340 3.9e-67 258.8 231 60.2
CSS0045485 Camellia sinensis var. sinensis HOM05D004550 ORTHO05D005340 5.1e-67 258.5 234 59.4
MSTRG.7770 Avicennia marina HOM05D004550 ORTHO05D005340 6.7e-67 258.1 233 60.1
Rhsim12G0077600 Rhododendron simsii HOM05D004550 ORTHO05D005340 8.7e-67 257.7 230 59.6
Cfa008917 Carpinus fangiana HOM05D004550 ORTHO05D005340 3.3e-66 255.8 232 60.3
Hma1.2p1_0354F.1_g133690 Hydrangea macrophylla HOM05D004550 ORTHO05D005340 5.7e-66 255.0 233 59.7
CiPaw.05G128700 Carya illinoinensis HOM05D004550 ORTHO05D005340 7.4e-66 254.6 231 60.6
QL03p070023 Quercus lobata HOM05D004550 ORTHO05D005340 9.7e-66 254.2 232 59.1
Aqoxy3G03523 Aquilegia oxysepala HOM05D004550 ORTHO05D005340 1.6e-65 253.4 232 59.5
SGA_v2.0_scaffold16G07747 Striga asiatica HOM05D004550 ORTHO05D005340 2.8e-65 252.7 236 56.8
Actinidia31956 Actinidia chinensis HOM05D004550 ORTHO05D005340 1.4e-64 250.4 233 57.9
Cc11_g12470 Coffea canephora HOM05D004550 ORTHO05D005340 2.4e-64 249.6 235 58.7
Nn4g23307 Nelumbo nucifera HOM05D004550 ORTHO05D005340 4.1e-64 248.8 231 61.0
Duzib251G0963 Durio zibethinus HOM05D004550 ORTHO05D005340 1.2e-63 247.3 233 60.1
GSVIVG01001334001 Vitis vinifera HOM05D004550 ORTHO05D005340 1.2e-63 247.3 231 61.0
Haze_11945 Corylus avellana HOM05D004550 ORTHO05D005340 1.0e-62 244.2 160 73.8
Ciclev10032704m.g Citrus clementina HOM05D004550 ORTHO05D005340 1.3e-62 243.8 232 57.3
Atru.chr11.1702 Acer truncatum HOM05D004550 ORTHO05D005340 1.7e-62 243.4 237 56.5
TAR371G1135 Trochodendron aralioides HOM05D004550 ORTHO05D005340 2.2e-62 243.0 171 70.2
MBI19_g03106_MAGBIO Magnolia biondii HOM05D004550 ORTHO05D005340 2.9e-62 242.7 234 59.0
vmacro01339 Vaccinium macrocarpon HOM05D004550 ORTHO05D005340 2.9e-62 242.7 195 63.1
Thecc.02G338200 Theobroma cacao HOM05D004550 ORTHO05D005340 3.8e-62 242.3 232 57.8
TAR374G1091 Trochodendron aralioides HOM05D004550 ORTHO05D005340 5.0e-62 241.9 167 70.1
Solyc05g012710.4 Solanum lycopersicum HOM05D004550 ORTHO05D005340 6.5e-62 241.5 233 55.8
Nitab4.5_0000334g0090 Nicotiana tabacum HOM05D004550 ORTHO05D005340 8.5e-62 241.1 233 58.8
Cpa.g.sc1.80 Carica papaya HOM05D004550 ORTHO05D005340 1.9e-61 240.0 166 71.7
TWI31G0520 Tripterygium wilfordii HOM05D004550 ORTHO05D005340 1.9e-61 240.0 236 57.6
DCAR_007179 Daucus carota HOM05D004550 ORTHO05D005340 2.5e-61 239.6 233 54.5
Lalb_Chr17g0340931 Lupinus albus HOM05D004550 ORTHO05D005340 2.5e-61 239.6 237 57.4
Nitab4.5_0011843g0010 Nicotiana tabacum HOM05D004550 ORTHO05D005340 2.5e-61 239.6 233 59.2
Sopen05g007540 Solanum pennellii HOM05D004550 ORTHO05D005340 2.5e-61 239.6 233 55.4
PGSC0003DMG400028333 Solanum tuberosum HOM05D004550 ORTHO05D005340 2.5e-61 239.6 233 55.8
Oeu021093.1 Olea europaea HOM05D004550 ORTHO05D005340 4.2e-61 238.8 167 69.5
ClCG09G021950 Citrullus lanatus HOM05D004550 ORTHO05D005340 7.2e-61 238.0 232 56.9
CsaV3_5G025150 Cucumis sativus L. HOM05D004550 ORTHO05D005340 9.4e-61 237.7 233 57.1
Gohir.D12G165500 Gossypium hirsutum HOM05D004550 ORTHO05D005340 9.4e-61 237.7 232 56.5
Gorai.008G178200 Gossypium raimondii HOM05D004550 ORTHO05D005340 9.4e-61 237.7 232 56.5
VMungo1215G2831 Vigna mungo HOM05D004550 ORTHO05D005340 9.4e-61 237.7 236 57.2
CAN.G1200.3 Capsicum annuum HOM05D004550 ORTHO05D005340 1.2e-60 237.3 233 54.5
Potri.008G092300 Populus trichocarpa HOM05D004550 ORTHO05D005340 1.2e-60 237.3 232 56.0
Peaxi162Scf00364g00223 Petunia axillaris HOM05D004550 ORTHO05D005340 1.6e-60 236.9 235 56.6
Phvul.002G090800 Phaseolus vulgaris HOM05D004550 ORTHO05D005340 1.6e-60 236.9 237 56.5
SGA_v2.0_scaffold36G14423 Striga asiatica HOM05D004550 ORTHO05D005340 2.7e-60 236.1 235 56.6
Duzib268G1083 Durio zibethinus HOM05D004550 ORTHO05D005340 3.6e-60 235.7 232 56.5
Ca_27938_v3 Cicer arietinum L. HOM05D004550 ORTHO05D005340 4.6e-60 235.3 235 55.7
RcHm_v2.0_Chr4g0438981 Rosa chinensis HOM05D004550 ORTHO05D005340 4.6e-60 235.3 232 55.6
unitig_21.g20859 Utricularia gibba HOM05D004550 ORTHO05D005340 7.9e-60 234.6 240 55.8
DCAR_030983 Daucus carota HOM05D004550 ORTHO05D005340 1.0e-59 234.2 234 57.7
TPR.G30749 Trifolium pratense HOM05D004550 ORTHO05D005340 1.0e-59 234.2 209 58.9
Eucgr.B03186 Eucalyptus grandis HOM05D004550 ORTHO05D005340 1.8e-59 233.4 233 55.4
Prupe.1G281100 Prunus persica HOM05D004550 ORTHO05D005340 1.8e-59 233.4 234 58.5
Sabra08G0069100 Salix brachista HOM05D004550 ORTHO05D005340 1.8e-59 233.4 173 67.1
Manes.05G107100 Manihot esculenta HOM05D004550 ORTHO05D005340 3.9e-59 232.3 234 55.6
BcaB05g24446 Brassica carinata HOM05D004550 ORTHO05D005340 5.1e-59 231.9 230 57.4
Glyma.01G054200 Glycine max HOM05D004550 ORTHO05D005340 5.1e-59 231.9 235 55.7
PSO063G5570 Papaver somniferum HOM05D004550 ORTHO05D005340 5.1e-59 231.9 231 57.6
Potri.010G162600 Populus trichocarpa HOM05D004550 ORTHO05D005340 6.7e-59 231.5 234 56.4
Gohir.A12G162200 Gossypium hirsutum HOM05D004550 ORTHO05D005340 8.8e-59 231.1 234 55.6
Glyma.02G112600 Glycine max HOM05D004550 ORTHO05D005340 1.1e-58 230.7 234 55.1
FAN07G0354 Fragaria x ananassa HOM05D004550 ORTHO05D005340 1.5e-58 230.3 232 55.2
Ah.02g129300 Amaranthus hybridus HOM05D004550 ORTHO05D005340 4.3e-58 228.8 253 52.2
COL.COLO4_27949 Corchorus olitorius HOM05D004550 ORTHO05D005340 4.3e-58 228.8 160 71.2
FvH4_4g30590 Fragaria vesca HOM05D004550 ORTHO05D005340 5.7e-58 228.4 232 55.2
Manes.05G087100 Manihot esculenta HOM05D004550 ORTHO05D005340 5.7e-58 228.4 170 67.1
Medtr5g043020 Medicago truncatula HOM05D004550 ORTHO05D005340 5.7e-58 228.4 237 54.9
PSO063G6186 Papaver somniferum HOM05D004550 ORTHO05D005340 5.7e-58 228.4 232 56.5
BolC2t08705H Brassica oleracea HOM05D004550 ORTHO05D005340 9.7e-58 227.6 230 56.1
FAN17G0531 Fragaria x ananassa HOM05D004550 ORTHO05D005340 9.7e-58 227.6 232 54.7
Sed0017620 Sechium edule HOM05D004550 ORTHO05D005340 1.3e-57 227.3 231 54.5
TWI79G1514 Tripterygium wilfordii HOM05D004550 ORTHO05D005340 1.3e-57 227.3 234 56.4
C02p26330 Brassica napus HOM05D004550 ORTHO05D005340 1.7e-57 226.9 230 55.7
Thhalv10019103m.g Eutrema salsugineum HOM05D004550 ORTHO05D005340 2.8e-57 226.1 230 55.2
arahy.Tifrunner.gnm1.ann1.M1L69X Arachis hypogaea HOM05D004550 ORTHO05D005340 3.7e-57 225.7 236 53.8
HanXRQChr12g0362721 Helianthus annuus HOM05D004550 ORTHO05D005340 3.7e-57 225.7 233 53.6
Lj2g0016497 Lotus japonicus HOM05D004550 ORTHO05D005340 3.7e-57 225.7 237 55.3
PGR102G3210 Punica granatum HOM05D004550 ORTHO05D005340 4.8e-57 225.3 243 53.1
Actinidia19927 Actinidia chinensis HOM05D004550 ORTHO05D005340 8.2e-57 224.6 219 57.1
ECA233G5814 Erigeron canadensis HOM05D004550 ORTHO05D005340 8.2e-57 224.6 224 54.9
Lsat_1_v5_gn_8_46800 Lactuca sativa HOM05D004550 ORTHO05D005340 1.1e-56 224.2 232 53.9
MELO3C002974.2 Cucumis melo HOM05D004550 ORTHO05D005340 1.4e-56 223.8 159 69.8
Sp5g24440 Schrenkiella parvula HOM05D004550 ORTHO05D005340 2.4e-56 223.0 233 56.2
Hund05856 Selenicereus undatus HOM05D004550 ORTHO05D005340 3.1e-56 222.6 239 51.9
CARHR062270 Cardamine hirsuta HOM05D004550 ORTHO05D005340 4.1e-56 222.2 222 56.8
HanXRQChr08g0210541 Helianthus annuus HOM05D004550 ORTHO05D005340 4.1e-56 222.2 236 52.5
HanXRQChr08g0211031 Helianthus annuus HOM05D004550 ORTHO05D005340 4.1e-56 222.2 236 52.5
Psat2g127440 Pisum sativum HOM05D004550 ORTHO05D005340 4.1e-56 222.2 235 52.3
A02p15870 Brassica napus HOM05D004550 ORTHO05D005340 5.3e-56 221.9 154 72.1
Ah.03g134600 Amaranthus hybridus HOM05D004550 ORTHO05D005340 6.9e-56 221.5 240 53.3
AL2G28500 Arabidopsis lyrata HOM05D004550 ORTHO05D005340 9.1e-56 221.1 226 58.0
arahy.Tifrunner.gnm1.ann1.F9ESEJ Arachis hypogaea HOM05D004550 ORTHO05D005340 9.1e-56 221.1 206 57.3
EL10Ac6g13282 Beta vulgaris HOM05D004550 ORTHO05D005340 1.5e-55 220.3 187 59.4
Sabra10G0123800 Salix brachista HOM05D001252 ORTHO05D005340 2.6e-55 219.5 171 64.3
AT1G69390 Arabidopsis thaliana HOM05D004550 ORTHO05D005340 3.4e-55 219.2 224 56.2
BolC6t39378H Brassica oleracea HOM05D004550 ORTHO05D005340 7.7e-55 218.0 232 55.2
Sc04g0007790 Simmondsia chinensis HOM05D004550 ORTHO05D005340 1.0e-54 217.6 234 51.3
C06p40530 Brassica napus HOM05D004550 ORTHO05D005340 1.3e-54 217.2 231 54.1
BcaB03g15897 Brassica carinata HOM05D004550 ORTHO05D005340 1.7e-54 216.9 155 69.7
Carub.0002s1599 Capsella rubella HOM05D004550 ORTHO05D005340 2.9e-54 216.1 222 55.0
A07p35690 Brassica napus HOM05D004550 ORTHO05D005340 3.8e-54 215.7 230 53.9
BraA07t31157Z Brassica rapa HOM05D004550 ORTHO05D005340 3.8e-54 215.7 230 53.9
Lalb_Chr04g0255821 Lupinus albus HOM05D004550 ORTHO05D005340 3.8e-54 215.7 210 56.2
FAN12G3802 Fragaria x ananassa HOM05D004550 ORTHO05D005340 1.9e-53 213.4 223 55.2
PSO478G0019 Papaver somniferum HOM05D004550 ORTHO05D005340 1.9e-53 213.4 165 64.2
FAN22G1576 Fragaria x ananassa HOM05D004550 ORTHO05D005340 2.5e-53 213.0 233 52.8
Potri.004G121000 Populus trichocarpa HOM05D004550 ORTHO05D005340 4.2e-53 212.2 215 59.5
Aa31LG4G11470 Aethionema arabicum HOM05D004550 ORTHO05D005340 2.7e-52 209.5 226 54.0
BcaC03g15080 Brassica carinata HOM05D004550 ORTHO05D005340 3.6e-52 209.1 157 68.8
THA.LOC104822027 Tarenaya hassleriana HOM05D004550 ORTHO05D005340 1.4e-51 207.2 231 53.2
HanXRQChr17g0545411 Helianthus annuus HOM05D004550 ORTHO05D005340 2.3e-51 206.5 169 63.3
HPP92_018458 Vanilla planifolia HOM05D004550 ORTHO05D005340 2.3e-51 206.5 234 50.4
Sabra04G0067200 Salix brachista HOM05D004550 ORTHO05D005340 6.7e-51 204.9 211 57.8
ATR0730G201 Amborella trichopoda HOM05D004550 ORTHO05D005340 1.1e-50 204.1 163 65.6
CDE04G2021 Ceratophyllum demersum HOM05D004550 ORTHO05D005340 1.7e-49 200.3 162 62.3
Os12g0498400 Oryza sativa ssp. japonica HOM05D004550 ORTHO05D005340 9.1e-48 194.5 152 63.2
MSTRG.729 Avicennia marina HOM05D004550 ORTHO05D005340 1.2e-47 194.1 133 69.9
AUR62005866 Chenopodium quinoa HOM05D004550 ORTHO05D005340 7.2e-45 184.9 238 45.4
SEGI_17925 Sequoiadendron giganteum HOM05D004550 ORTHO05D005340 2.3e-43 179.9 164 59.8
AUR62032858 Chenopodium quinoa HOM05D004550 ORTHO05D005340 3.0e-43 179.5 237 45.1
Gohir.D02G127801 Gossypium hirsutum HOM05D004550 ORTHO05D005340 7.5e-42 174.9 232 46.6
Gorai.005G143600 Gossypium raimondii HOM05D004550 ORTHO05D005340 7.5e-42 174.9 232 46.6
MELO3C012132.2 Cucumis melo HOM05D004550 ORTHO05D005340 1.3e-41 174.1 226 45.1
Sed0010995 Sechium edule HOM05D004550 ORTHO05D005340 5.3e-40 168.7 230 45.2
CsaV3_5G033110 Cucumis sativus L. HOM05D004550 ORTHO05D005340 5.9e-39 165.2 141 59.6
ClCG05G023910 Citrullus lanatus HOM05D004550 ORTHO05D005340 1.0e-38 164.5 147 59.9
Zm00001eb409620 Zea mays HOM05D004550 ORTHO05D005340 2.9e-38 162.9 128 63.3
Thecc.02G337600 Theobroma cacao HOM05D004550 ORTHO05D005340 1.2e-36 157.5 108 73.1
MD16G1066100 Malus domestica HOM05D004550 ORTHO05D005340 1.2e-34 151.0 99 75.8
Mapoly0021s0017 Marchantia polymorpha HOM05D004550 ORTHO05D005340 3.7e-33 146.0 190 48.4
Pp3c23_20800 Physcomitrium patens HOM05D004550 ORTHO05D005340 1.2e-31 141.0 176 49.4
AagrBONN_evm.TU.Sc2ySwM_344.2821 Anthoceros agrestis HOM05D004550 ORTHO05D005340 1.6e-31 140.6 162 45.7
Actinidia33237 Actinidia chinensis HOM05D004550 ORTHO05D005340 4.5e-31 139.0 155 52.9
Pp3c20_5010 Physcomitrium patens HOM05D004550 ORTHO05D005340 5.9e-31 138.7 130 57.7
SMO356G0701 Selaginella moellendorffii HOM05D004550 ORTHO05D005340 2.9e-30 136.3 121 61.2
SMO141G0150 Selaginella moellendorffii HOM05D004550 ORTHO05D005340 1.5e-29 134.0 99 60.6
Pp3c9_20530 Physcomitrium patens HOM05D004550 ORTHO05D005340 3.4e-26 122.9 140 47.1
arahy.Tifrunner.gnm1.ann1.QAIU0T Arachis hypogaea HOM05D004550 ORTHO05D005340 6.6e-22 108.6 80 62.5
BcaC08g45895 Brassica carinata HOM05D004550 ORTHO05D005340 1.0e-19 101.3 71 69.0
BcaB03g15467 Brassica carinata HOM05D004550 ORTHO05D005340 3.7e-17 92.8 64 73.4
Potri.017G088401 Populus trichocarpa HOM05D004550 ORTHO05D005340 7.0e-16 88.6 67 62.7
C06p37000 Brassica napus HOM05D004550 ORTHO05D005340 3.5e-15 86.3 95 53.7
BolC6t38810H Brassica oleracea HOM05D004550 ORTHO05D005340 3.5e-15 86.3 95 53.7
PRCOL_00005365 Prasinoderma coloniale HOM05D004550 ORTHO05D005340 1.1e-13 81.3 114 38.6
Cre17.g720350 Chlamydomonas reinhardtii HOM05D004550 ORTHO05D005340 1.2e-12 77.8 94 41.5
MCO05G609 Micromonas commoda HOM05D004550 ORTHO05D005340 6.2e-12 75.5 104 41.3
FAN02G1582 Fragaria x ananassa HOM05D001441 ORTHO05D001332 4.1e-08 62.8 34 85.3


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