Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0166371 Rosa chinensis HOM05D004709 ORTHO05D005669 1.6e-49 199.1 103 100.0
FvH4_6g47340 Fragaria vesca HOM05D004709 ORTHO05D005669 4.4e-39 164.5 92 92.4
FAN14G4554 Fragaria x ananassa HOM05D004709 ORTHO05D005669 9.8e-39 163.3 92 91.3
FAN05G1711 Fragaria x ananassa HOM05D004709 ORTHO05D005669 7.0e-37 157.1 92 88.0
FAN09G0998 Fragaria x ananassa HOM05D004709 ORTHO05D005669 9.2e-37 156.8 92 88.0
FAN02G1874 Fragaria x ananassa HOM05D004709 ORTHO05D005669 1.2e-36 156.4 92 89.1
MD00G1156500 Malus domestica HOM05D004709 ORTHO05D005669 8.6e-35 150.2 96 83.3
Prupe.3G258000 Prunus persica HOM05D004709 ORTHO05D005669 4.7e-33 144.4 88 85.2
MD09G1062400 Malus domestica HOM05D004709 ORTHO05D005669 1.5e-31 139.4 88 84.1
Nn4g23362 Nelumbo nucifera HOM05D004709 ORTHO05D005669 2.9e-30 135.2 88 78.4
AUR62042435 Chenopodium quinoa HOM05D004709 ORTHO05D005669 1.4e-29 132.9 87 72.4
COL.COLO4_36893 Corchorus olitorius HOM05D004709 ORTHO05D005669 5.4e-29 131.0 90 72.2
Ah.10g032000 Amaranthus hybridus HOM05D004709 ORTHO05D005669 7.1e-29 130.6 85 74.1
AUR62018162 Chenopodium quinoa HOM05D004709 ORTHO05D005669 7.1e-29 130.6 87 70.1
Nn3g17388 Nelumbo nucifera HOM05D004709 ORTHO05D005669 9.2e-29 130.2 88 72.7
Gohir.D12G183300 Gossypium hirsutum HOM05D004709 ORTHO05D005669 2.7e-28 128.6 90 70.0
Gohir.A12G180600 Gossypium hirsutum HOM05D004709 ORTHO05D005669 4.6e-28 127.9 90 68.9
Thecc.03G097000 Theobroma cacao HOM05D004709 ORTHO05D005669 4.6e-28 127.9 90 70.0
EL10Ac2g03100 Beta vulgaris HOM05D004709 ORTHO05D005669 6.0e-28 127.5 82 69.5
Duzib205G1485 Durio zibethinus HOM05D004709 ORTHO05D005669 6.0e-28 127.5 90 68.9
Eucgr.B00568 Eucalyptus grandis HOM05D004709 ORTHO05D005669 6.0e-28 127.5 91 71.4
Rhsim08G0148900 Rhododendron simsii HOM05D004709 ORTHO05D005669 6.0e-28 127.5 82 75.6
COL.COLO4_31014 Corchorus olitorius HOM05D004709 ORTHO05D005669 7.8e-28 127.1 90 70.0
CAN.G479.31 Capsicum annuum HOM05D004709 ORTHO05D005669 1.0e-27 126.7 84 73.8
ClCG06G015840 Citrullus lanatus HOM05D004709 ORTHO05D005669 1.3e-27 126.3 85 74.1
HanXRQChr05g0157171 Helianthus annuus HOM05D004709 ORTHO05D005669 1.3e-27 126.3 84 70.2
Sc10g0003220 Simmondsia chinensis HOM05D004709 ORTHO05D005669 1.7e-27 125.9 89 71.9
Solyc03g115490.1 Solanum lycopersicum HOM05D004709 ORTHO05D005669 1.7e-27 125.9 84 71.4
Sopen03g034490 Solanum pennellii HOM05D004709 ORTHO05D005669 1.7e-27 125.9 84 71.4
PGSC0003DMG400024653 Solanum tuberosum HOM05D004709 ORTHO05D005669 1.7e-27 125.9 84 71.4
Nitab4.5_0004511g0070 Nicotiana tabacum HOM05D004709 ORTHO05D005669 3.9e-27 124.8 84 71.4
MELO3C017207.2 Cucumis melo HOM05D004709 ORTHO05D005669 5.1e-27 124.4 85 70.6
MBI16_g16369_MAGBIO Magnolia biondii HOM05D004709 ORTHO05D005669 6.6e-27 124.0 84 73.8
Manes.06G087400 Manihot esculenta HOM05D004709 ORTHO05D005669 6.6e-27 124.0 87 74.7
PSO478G1650 Papaver somniferum HOM05D004709 ORTHO05D005669 6.6e-27 124.0 84 70.2
Gorai.008G196600 Gossypium raimondii HOM05D004709 ORTHO05D005669 8.6e-27 123.6 90 67.8
Nn7g35950 Nelumbo nucifera HOM05D004709 ORTHO05D005669 8.6e-27 123.6 88 72.7
Nitab4.5_0002881g0040 Nicotiana tabacum HOM05D004709 ORTHO05D005669 8.6e-27 123.6 84 70.2
Potri.009G079800 Populus trichocarpa HOM05D004709 ORTHO05D005669 8.6e-27 123.6 88 71.6
CANSAT56G2672 Cannabis sativa HOM05D004709 ORTHO05D005669 1.1e-26 123.2 89 68.5
Ca_06818_v3 Cicer arietinum L. HOM05D004709 ORTHO05D005669 1.1e-26 123.2 90 68.9
SalBow5G3312 Salvia bowleyana HOM05D004709 ORTHO05D005669 1.1e-26 123.2 85 71.8
Zm00001eb398330 Zea mays HOM05D004709 ORTHO05D005669 1.5e-26 122.9 89 70.8
CiPaw.11G049800 Carya illinoinensis HOM05D004709 ORTHO05D005669 1.9e-26 122.5 93 67.7
ClCG04G011960 Citrullus lanatus HOM05D004709 ORTHO05D005669 1.9e-26 122.5 87 69.0
Lalb_Chr10g0093091 Lupinus albus HOM05D004709 ORTHO05D005669 1.9e-26 122.5 91 68.1
Lsat_1_v5_gn_5_22101 Lactuca sativa HOM05D004709 ORTHO05D005669 2.5e-26 122.1 86 67.4
TWI18G0167 Tripterygium wilfordii HOM05D004709 ORTHO05D005669 2.5e-26 122.1 88 67.0
Gohir.A03G069100 Gossypium hirsutum HOM05D004709 ORTHO05D005669 3.3e-26 121.7 90 66.7
MD08G1088600 Malus domestica HOM05D004709 ORTHO05D005669 4.3e-26 121.3 88 75.0
PGR083G1512 Punica granatum HOM05D004709 ORTHO05D005669 4.3e-26 121.3 90 67.8
Migut.D01673 Erythranthe guttata HOM05D004709 ORTHO05D005669 7.3e-26 120.6 84 70.2
Manes.14G083600 Manihot esculenta HOM05D004709 ORTHO05D005669 7.3e-26 120.6 88 71.6
TAR622G0455 Trochodendron aralioides HOM05D004709 ORTHO05D005669 7.3e-26 120.6 89 68.5
Sed0002201 Sechium edule HOM05D004709 ORTHO05D005669 9.5e-26 120.2 87 65.5
TAR371G0159 Trochodendron aralioides HOM05D004709 ORTHO05D005669 9.5e-26 120.2 88 67.0
Ciclev10022528m.g Citrus clementina HOM05D004709 ORTHO05D005669 1.2e-25 119.8 88 64.8
QL10p018658 Quercus lobata HOM05D004709 ORTHO05D005669 1.2e-25 119.8 86 69.8
Duzib084G0757 Durio zibethinus HOM05D004709 ORTHO05D005669 1.6e-25 119.4 90 65.6
Psat3g200920 Pisum sativum HOM05D004709 ORTHO05D005669 1.6e-25 119.4 91 67.0
Gohir.D03G095600 Gossypium hirsutum HOM05D004709 ORTHO05D005669 2.8e-25 118.6 90 65.6
Gorai.003G100300 Gossypium raimondii HOM05D004709 ORTHO05D005669 2.8e-25 118.6 90 65.6
Lsat_1_v5_gn_1_13721 Lactuca sativa HOM05D004709 ORTHO05D005669 3.6e-25 118.2 86 65.1
Phvul.008G035200 Phaseolus vulgaris HOM05D004709 ORTHO05D005669 3.6e-25 118.2 90 66.7
Os08g0239000 Oryza sativa ssp. japonica HOM05D004709 ORTHO05D005669 4.7e-25 117.9 88 68.2
THA.LOC104801321 Tarenaya hassleriana HOM05D004709 ORTHO05D005669 4.7e-25 117.9 88 68.2
Glyma.08G242600 Glycine max HOM05D004709 ORTHO05D005669 6.2e-25 117.5 94 67.0
Aqoxy3G03572 Aquilegia oxysepala HOM05D004709 ORTHO05D005669 8.1e-25 117.1 85 67.1
Cpa.g.sc94.6 Carica papaya HOM05D004709 ORTHO05D005669 1.1e-24 116.7 86 67.4
Glyma.18G264800 Glycine max HOM05D004709 ORTHO05D005669 1.4e-24 116.3 94 66.0
Sed0019301 Sechium edule HOM05D004709 ORTHO05D005669 1.8e-24 115.9 84 67.9
Aa31LG11G2140 Aethionema arabicum HOM05D004709 ORTHO05D005669 2.4e-24 115.5 88 67.0
MELO3C002013.2 Cucumis melo HOM05D004709 ORTHO05D005669 2.4e-24 115.5 84 65.5
ECA246G5156 Erigeron canadensis HOM05D004709 ORTHO05D005669 4.0e-24 114.8 89 66.3
Medtr0287s0050 Medicago truncatula HOM05D004709 ORTHO05D005669 4.0e-24 114.8 86 67.4
Medtr7g012870 Medicago truncatula HOM05D004709 ORTHO05D005669 4.0e-24 114.8 86 67.4
Cfa019297 Carpinus fangiana HOM05D004709 ORTHO05D005669 5.2e-24 114.4 89 65.2
CsaV3_1G005830 Cucumis sativus L. HOM05D004709 ORTHO05D005669 5.2e-24 114.4 84 64.3
Os10g0406600 Oryza sativa ssp. japonica HOM05D004709 ORTHO05D005669 5.2e-24 114.4 88 65.9
Prupe.5G200900 Prunus persica HOM05D004709 ORTHO05D005669 5.2e-24 114.4 86 62.8
HanXRQChr04g0101451 Helianthus annuus HOM05D004709 ORTHO05D005669 8.9e-24 113.6 86 60.5
ATR0064G063 Amborella trichopoda HOM05D004709 ORTHO05D005669 2.6e-23 112.1 84 65.5
Zm00001eb011200 Zea mays HOM05D004709 ORTHO05D005669 2.6e-23 112.1 89 64.0
Atru.chr2.2420 Acer truncatum HOM05D004709 ORTHO05D005669 4.4e-23 111.3 84 66.7
Sed0023667 Sechium edule HOM05D004709 ORTHO05D005669 1.7e-22 109.4 84 65.5
AUR62008495 Chenopodium quinoa HOM05D004709 ORTHO05D005669 4.9e-22 107.8 84 59.5
HanXRQChr17g0545301 Helianthus annuus HOM05D004709 ORTHO05D005669 8.4e-22 107.1 86 59.3
Mapoly0030s0074 Marchantia polymorpha HOM05D004709 ORTHO05D005669 1.1e-21 106.7 91 57.1
Peaxi162Scf00106g00072 Petunia axillaris HOM05D004709 ORTHO05D005669 1.1e-21 106.7 78 66.7
Rhsim12G0152500 Rhododendron simsii HOM05D004709 ORTHO05D005669 1.1e-21 106.7 87 65.5
SHI27018 Sapria himalayana HOM05D004709 ORTHO05D005669 1.4e-21 106.3 81 61.7
Lj1g0000800 Lotus japonicus HOM05D004709 ORTHO05D005669 3.2e-21 105.1 81 69.1
DCAR_013071 Daucus carota HOM05D000316 ORTHO05D000374 7.1e-21 104.0 80 66.2
Dinv10689 Davidia involucrata HOM05D004709 ORTHO05D005669 9.2e-21 103.6 75 66.7
Gohir.D12G183150 Gossypium hirsutum HOM05D004709 ORTHO05D005669 1.3e-19 99.8 71 69.0
Actinidia09247 Actinidia chinensis HOM05D004709 ORTHO05D005669 6.6e-19 97.4 74 66.2
CARHR274970 Cardamine hirsuta HOM05D004709 ORTHO05D005669 1.5e-18 96.3 84 54.8
AL8G37880 Arabidopsis lyrata HOM05D004709 ORTHO05D005669 1.9e-18 95.9 84 54.8
CBR_g38475 Chara braunii HOM05D004709 ORTHO05D005669 4.3e-18 94.7 86 53.5
Pp3c1_9190 Physcomitrium patens HOM05D004709 ORTHO05D005669 5.6e-18 94.4 91 47.3
Actinidia04845 Actinidia chinensis HOM05D004709 ORTHO05D005669 7.3e-18 94.0 66 69.7
Thhalv10005205m.g Eutrema salsugineum HOM05D004709 ORTHO05D005669 9.6e-18 93.6 84 53.6
GSVIVG01007919001 Vitis vinifera HOM05D004709 ORTHO05D005669 1.3e-17 93.2 69 60.9
Carub.0008s2188 Capsella rubella HOM05D004709 ORTHO05D005669 1.6e-17 92.8 84 52.4
BcaC06g33217 Brassica carinata HOM05D004709 ORTHO05D005669 2.1e-17 92.4 84 51.2
C07p44900 Brassica napus HOM05D004709 ORTHO05D005669 3.6e-17 91.7 84 51.2
BolC7t45013H Brassica oleracea HOM05D004709 ORTHO05D005669 3.6e-17 91.7 84 51.2
Dinv38784 Davidia involucrata HOM05D004709 ORTHO05D005669 4.8e-17 91.3 62 66.1
Sp2g24450 Schrenkiella parvula HOM05D004709 ORTHO05D005669 4.8e-17 91.3 84 52.4
AT5G61220 Arabidopsis thaliana HOM05D004709 ORTHO05D005669 6.2e-17 90.9 84 52.4
C02p61460 Brassica napus HOM05D004709 ORTHO05D005669 6.2e-17 90.9 83 50.6
BolC2t12197H Brassica oleracea HOM05D004709 ORTHO05D005669 6.2e-17 90.9 83 50.6
A03p46850 Brassica napus HOM05D004709 ORTHO05D005669 8.1e-17 90.5 84 50.0
Atru.chr9.371 Acer truncatum HOM05D004709 ORTHO05D005669 1.4e-16 89.7 80 57.5
Medtr7g083770 Medicago truncatula HOM05D004709 ORTHO05D005669 2.4e-16 89.0 72 61.1
BraA02t09093Z Brassica rapa HOM05D004709 ORTHO05D005669 5.3e-16 87.8 83 49.4
BraA03t13805Z Brassica rapa HOM05D004709 ORTHO05D005669 6.9e-16 87.4 84 48.8
Sabra09G0061800 Salix brachista HOM05D004709 ORTHO05D005669 9.0e-16 87.0 59 71.2
Sc04g0003050 Simmondsia chinensis HOM05D004709 ORTHO05D005669 9.0e-16 87.0 81 51.9
BcaC07g40932 Brassica carinata HOM05D004709 ORTHO05D005669 1.2e-15 86.7 83 48.2
C07p56170 Brassica napus HOM05D004709 ORTHO05D005669 1.2e-15 86.7 83 49.4
C08p39260 Brassica napus HOM05D004709 ORTHO05D005669 1.2e-15 86.7 83 48.2
BcaC06g33172 Brassica carinata HOM05D004709 ORTHO05D005669 1.5e-15 86.3 86 51.2
C06p42660 Brassica napus HOM05D004709 ORTHO05D005669 1.5e-15 86.3 83 49.4
A02p41520 Brassica napus HOM05D004709 ORTHO05D005669 2.0e-15 85.9 83 48.2
BolC6t39173H Brassica oleracea HOM05D004709 ORTHO05D005669 2.0e-15 85.9 83 48.2
BcaC01g01257 Brassica carinata HOM05D004709 ORTHO05D005669 2.6e-15 85.5 83 48.2
BolC3t21308H Brassica oleracea HOM05D004709 ORTHO05D005669 2.6e-15 85.5 83 48.2
Cre08.g382850 Chlamydomonas reinhardtii HOM05D004709 ORTHO05D005669 2.6e-15 85.5 83 49.4
CSS0011072 Camellia sinensis var. sinensis HOM05D004709 ORTHO05D005669 5.8e-15 84.3 58 72.4
BcaC03g18433 Brassica carinata HOM05D004709 ORTHO05D005669 9.9e-15 83.6 83 48.2
C02p63420 Brassica napus HOM05D004709 ORTHO05D005669 9.9e-15 83.6 83 48.2
C03p89860 Brassica napus HOM05D004709 ORTHO05D005669 9.9e-15 83.6 83 48.2
BolC2t12409H Brassica oleracea HOM05D004709 ORTHO05D005669 9.9e-15 83.6 83 48.2
A03p02360 Brassica napus HOM05D004709 ORTHO05D005669 2.9e-14 82.0 83 45.8
AUR62021597 Chenopodium quinoa HOM05D004709 ORTHO05D005669 2.9e-14 82.0 86 50.0
Pp3c9_6850 Physcomitrium patens HOM05D004709 ORTHO05D005669 2.9e-14 82.0 86 48.8
Carub.0006s3376 Capsella rubella HOM05D004709 ORTHO05D005669 2.4e-13 79.0 87 49.4
C05p13760 Brassica napus HOM05D004709 ORTHO05D005669 7.1e-13 77.4 79 49.4
BolC5t30114H Brassica oleracea HOM05D004709 ORTHO05D005669 7.1e-13 77.4 79 49.4
BcaC05g25635 Brassica carinata HOM05D004709 ORTHO05D005669 9.3e-13 77.0 79 49.4
BraA07t31299Z Brassica rapa HOM05D004709 ORTHO05D005669 2.1e-12 75.9 79 48.1
PRCOL_00002203 Prasinoderma coloniale HOM05D004709 ORTHO05D005669 8.7e-11 70.5 76 51.3
SMO174G0212 Selaginella moellendorffii HOM05D004709 ORTHO05D005669 2.5e-10 68.9 84 46.4
unitig_37.g12784 Utricularia gibba HOM05D004709 ORTHO05D005669 1.6e-09 66.2 59 62.7
CARHR099960 Cardamine hirsuta HOM05D004709 ORTHO05D005669 2.8e-09 65.5 66 48.5
MCO16G339 Micromonas commoda HOM05D004709 ORTHO05D005669 1.5e-07 59.7 79 43.0
Cfa024147 Carpinus fangiana HOM05D004709 ORTHO05D005669 3.8e-06 55.1 94 40.4
CDE02G0474 Ceratophyllum demersum HOM05D004709 ORTHO05D005669 3.8e-06 55.1 34 73.5


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