Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0166351 Rosa chinensis HOM05D004436 ORTHO05D005179 2.8e-230 801.6 406 100.0
FvH4_6g47280 Fragaria vesca HOM05D004436 ORTHO05D005179 2.3e-176 622.5 415 79.0
RcHm_v2.0_Chr2g0144531 Rosa chinensis HOM05D004436 ORTHO05D005179 3.1e-168 595.5 408 75.5
FvH4_6g34180 Fragaria vesca HOM05D004436 ORTHO05D005179 7.0e-165 584.3 410 73.4
FAN02G3564 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.3e-163 580.1 410 72.9
FAN05G5343 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.7e-163 579.7 410 72.7
FAN09G2135 Fragaria x ananassa HOM05D004436 ORTHO05D005179 6.6e-163 577.8 410 72.7
FAN26G0630 Fragaria x ananassa HOM05D004436 ORTHO05D005179 2.6e-159 565.8 396 73.5
FAN14G2695 Fragaria x ananassa HOM05D004436 ORTHO05D005179 4.4e-159 565.1 446 67.5
FAN24G2018 Fragaria x ananassa HOM05D004436 ORTHO05D005179 4.3e-130 468.8 383 67.1
Prupe.3G044800 Prunus persica HOM05D004436 ORTHO05D005179 3.0e-115 419.5 430 54.9
FvH4_2g14600 Fragaria vesca HOM05D004436 ORTHO05D005179 2.4e-112 409.8 295 74.6
MD09G1187900 Malus domestica HOM05D004436 ORTHO05D005179 4.5e-111 405.6 397 56.2
CiPaw.01G221800 Carya illinoinensis HOM05D004436 ORTHO05D005179 4.2e-109 399.1 399 53.9
CiPaw.05G181900 Carya illinoinensis HOM05D004436 ORTHO05D005179 3.9e-107 392.5 399 53.1
Sed0007780 Sechium edule HOM05D004436 ORTHO05D005179 6.7e-107 391.7 397 54.7
ClCG09G000840 Citrullus lanatus HOM05D004436 ORTHO05D005179 4.5e-103 379.0 397 53.4
GSVIVG01016817001 Vitis vinifera HOM05D004436 ORTHO05D005179 5.0e-102 375.6 395 53.2
MELO3C024372.2 Cucumis melo HOM05D004436 ORTHO05D005179 1.9e-101 373.6 394 53.0
CsaV3_7G034640 Cucumis sativus L. HOM05D004436 ORTHO05D005179 1.9e-101 373.6 394 52.8
Lj5A40G74 Lonicera japonica HOM05D004436 ORTHO05D005179 4.7e-100 369.0 392 51.0
Potri.001G198600 Populus trichocarpa HOM05D004436 ORTHO05D005179 2.3e-99 366.7 433 46.4
CANSAT56G1493 Cannabis sativa HOM05D004436 ORTHO05D005179 2.0e-98 363.6 391 50.9
Manes.11G023100 Manihot esculenta HOM05D004436 ORTHO05D005179 2.6e-98 363.2 433 47.8
TWI23G0436 Tripterygium wilfordii HOM05D004436 ORTHO05D005179 3.3e-98 362.8 398 51.3
Lj6g0016044 Lotus japonicus HOM05D004436 ORTHO05D005179 5.7e-98 362.1 419 48.7
Rhsim08G0236100 Rhododendron simsii HOM05D004436 ORTHO05D005179 2.2e-97 360.1 397 49.4
Sed0020704 Sechium edule HOM05D004436 ORTHO05D005179 6.3e-97 358.6 393 51.1
CSS0015890 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 7.0e-96 355.1 393 52.2
Sabra01G0155800 Salix brachista HOM05D004436 ORTHO05D005179 1.5e-95 354.0 424 46.7
CAN.G540.4 Capsicum annuum HOM05D004436 ORTHO05D005179 3.5e-95 352.8 400 48.8
vmacro22224 Vaccinium macrocarpon HOM05D004436 ORTHO05D005179 1.0e-94 351.3 397 50.4
Ciclev10025597m.g Citrus clementina HOM05D004436 ORTHO05D005179 1.3e-94 350.9 404 50.0
TAR375G0086 Trochodendron aralioides HOM05D004436 ORTHO05D005179 1.3e-94 350.9 414 46.1
Dinv03512 Davidia involucrata HOM05D004436 ORTHO05D005179 1.7e-94 350.5 402 49.3
Manes.04G142200 Manihot esculenta HOM05D004436 ORTHO05D005179 3.8e-94 349.4 425 47.1
Cpa.g.sc25.86 Carica papaya HOM05D004436 ORTHO05D005179 5.5e-93 345.5 410 46.8
Eucgr.F03167 Eucalyptus grandis HOM05D004436 ORTHO05D005179 9.4e-93 344.7 413 48.2
Haze_15997 Corylus avellana HOM05D004436 ORTHO05D005179 2.1e-92 343.6 441 46.0
Nitab4.5_0000035g0090 Nicotiana tabacum HOM05D004436 ORTHO05D005179 4.7e-92 342.4 390 48.2
Glyma.15G165300 Glycine max HOM05D004436 ORTHO05D005179 1.0e-91 341.3 392 48.0
Oeu044709.1 Olea europaea HOM05D004436 ORTHO05D005179 1.4e-91 340.9 391 47.3
PGSC0003DMG400016304 Solanum tuberosum HOM05D004436 ORTHO05D005179 1.4e-91 340.9 392 47.4
Actinidia32167 Actinidia chinensis HOM05D004436 ORTHO05D005179 5.2e-91 339.0 403 47.4
Sc12g0010440 Simmondsia chinensis HOM05D004436 ORTHO05D005179 2.0e-90 337.0 412 48.5
THA.LOC104804933 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 2.0e-90 337.0 402 47.8
Thecc.03G227200 Theobroma cacao HOM05D004436 ORTHO05D005179 2.0e-90 337.0 416 47.4
CSS0033207 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 5.7e-90 335.5 388 50.8
Solyc06g053330.4 Solanum lycopersicum HOM05D004436 ORTHO05D005179 5.7e-90 335.5 392 46.7
Peaxi162Scf00943g00014 Petunia axillaris HOM05D004436 ORTHO05D005179 7.4e-90 335.1 403 45.2
Sopen06g018390 Solanum pennellii HOM05D004436 ORTHO05D005179 7.4e-90 335.1 391 46.5
Lsat_1_v5_gn_5_135221 Lactuca sativa HOM05D004436 ORTHO05D005179 1.7e-89 334.0 401 45.6
Oeu047041.1 Olea europaea HOM05D004436 ORTHO05D005179 1.7e-89 334.0 386 47.7
Peaxi162Scf00647g00219 Petunia axillaris HOM05D004436 ORTHO05D005179 1.4e-88 330.9 390 44.9
Dinv30366 Davidia involucrata HOM05D004436 ORTHO05D005179 3.1e-88 329.7 358 51.7
Lalb_Chr08g0233321 Lupinus albus HOM05D004436 ORTHO05D005179 7.0e-88 328.6 405 46.2
Duzib205G0267 Durio zibethinus HOM05D004436 ORTHO05D005179 1.2e-87 327.8 410 48.3
ECA234G4408 Erigeron canadensis HOM05D004436 ORTHO05D005179 7.7e-87 325.1 381 47.8
Migut.D00948 Erythranthe guttata HOM05D004436 ORTHO05D005179 7.7e-87 325.1 408 45.1
PGR119G1065 Punica granatum HOM05D004436 ORTHO05D005179 1.3e-86 324.3 406 47.8
FAN09G3702 Fragaria x ananassa HOM05D002326 ORTHO05D005179 1.7e-86 323.9 408 50.7
FAN27G1625 Fragaria x ananassa HOM05D004436 ORTHO05D005179 2.2e-86 323.6 380 53.2
Nitab4.5_0012713g0010 Nicotiana tabacum HOM05D004436 ORTHO05D005179 2.9e-86 323.2 390 46.4
Aa31LG8G1130 Aethionema arabicum HOM05D004436 ORTHO05D005179 1.1e-85 321.2 395 46.6
FAN02G4131 Fragaria x ananassa HOM05D002326 ORTHO05D005179 2.5e-85 320.1 409 50.6
Atru.chr1.3808 Acer truncatum HOM05D004436 ORTHO05D005179 9.4e-85 318.2 391 48.1
HanXRQChr10g0312341 Helianthus annuus HOM05D004436 ORTHO05D005179 2.1e-84 317.0 393 45.0
Ca_02096_v3 Cicer arietinum L. HOM05D004436 ORTHO05D005179 6.1e-84 315.5 396 46.5
Hma1.2p1_0496F.1_g166100 Hydrangea macrophylla HOM05D004436 ORTHO05D005179 5.2e-83 312.4 413 44.8
Sp3g12180 Schrenkiella parvula HOM05D004436 ORTHO05D005179 1.5e-82 310.8 391 44.5
MSTRG.22562 Avicennia marina HOM05D004436 ORTHO05D005179 2.6e-82 310.1 395 44.3
Thhalv10020760m.g Eutrema salsugineum HOM05D004436 ORTHO05D005179 9.7e-82 308.1 394 44.7
arahy.Tifrunner.gnm1.ann1.0TY6IG Arachis hypogaea HOM05D004436 ORTHO05D005179 2.2e-81 307.0 397 44.3
arahy.Tifrunner.gnm1.ann1.4RDH3B Arachis hypogaea HOM05D004436 ORTHO05D005179 2.2e-81 307.0 397 44.1
Phvul.009G236700 Phaseolus vulgaris HOM05D004436 ORTHO05D005179 2.8e-81 306.6 398 46.0
Carub.0003s1351 Capsella rubella HOM05D004436 ORTHO05D005179 8.3e-81 305.1 413 41.6
Gohir.D03G171700 Gossypium hirsutum HOM05D004436 ORTHO05D005179 1.4e-80 304.3 430 44.4
MD17G1172300 Malus domestica HOM05D004436 ORTHO05D005179 1.4e-80 304.3 312 52.9
Gorai.003G182300 Gossypium raimondii HOM05D004436 ORTHO05D005179 1.8e-80 303.9 430 44.4
Hund20819 Selenicereus undatus HOM05D004436 ORTHO05D005179 1.8e-80 303.9 393 46.1
COL.COLO4_30482 Corchorus olitorius HOM05D004436 ORTHO05D005179 2.4e-80 303.5 422 43.6
DCAR_026403 Daucus carota HOM05D004436 ORTHO05D005179 9.1e-80 301.6 398 42.7
Gohir.A03G000500 Gossypium hirsutum HOM05D004436 ORTHO05D005179 2.7e-79 300.1 430 44.2
TPR.G13789 Trifolium pratense HOM05D004436 ORTHO05D005179 7.7e-79 298.5 394 44.7
Medtr7g104810 Medicago truncatula HOM05D004436 ORTHO05D005179 1.7e-78 297.4 400 44.8
Medtr2g037880 Medicago truncatula HOM05D004436 ORTHO05D005179 8.5e-78 295.0 395 43.3
SGA_v2.0_scaffold68G22895 Striga asiatica HOM05D004436 ORTHO05D005179 8.5e-78 295.0 389 43.7
Cc04_g01610 Coffea canephora HOM05D004436 ORTHO05D005179 1.5e-77 294.3 315 49.2
AL3G26120 Arabidopsis lyrata HOM05D004436 ORTHO05D005179 2.5e-77 293.5 422 40.5
Psat1g144000 Pisum sativum HOM05D004436 ORTHO05D005179 2.7e-76 290.0 398 42.7
CDE07G0038 Ceratophyllum demersum HOM05D004436 ORTHO05D005179 3.6e-76 289.7 421 41.8
Rhsim10G0150900 Rhododendron simsii HOM05D004436 ORTHO05D005179 3.6e-76 289.7 464 39.9
COL.COLO4_17027 Corchorus olitorius HOM05D004436 ORTHO05D005179 1.0e-75 288.1 349 48.4
AT3G13940 Arabidopsis thaliana HOM05D004436 ORTHO05D005179 6.8e-75 285.4 418 40.0
AUR62009860 Chenopodium quinoa HOM05D004436 ORTHO05D005179 1.7e-73 280.8 392 41.1
Aqoxy2G00706 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 2.2e-73 280.4 399 41.6
Ah.07g197300 Amaranthus hybridus HOM05D004436 ORTHO05D005179 2.8e-73 280.0 394 43.1
BcaB04g20967 Brassica carinata HOM05D004436 ORTHO05D005179 4.8e-73 279.3 395 42.8
BcaC09g48383 Brassica carinata HOM05D004436 ORTHO05D005179 2.4e-72 276.9 393 42.7
C01p50660 Brassica napus HOM05D004436 ORTHO05D005179 2.4e-72 276.9 393 42.7
BolC1t05015H Brassica oleracea HOM05D004436 ORTHO05D005179 2.4e-72 276.9 393 42.7
BraA01t04010Z Brassica rapa HOM05D004436 ORTHO05D005179 3.1e-72 276.6 401 42.1
A01p39710 Brassica napus HOM05D004436 ORTHO05D005179 9.1e-72 275.0 393 42.7
CARHR088750 Cardamine hirsuta HOM05D004436 ORTHO05D005179 2.0e-71 273.9 403 40.7
Medtr2g037460 Medicago truncatula HOM05D004436 ORTHO05D005179 5.9e-71 272.3 394 42.4
FAN14G5104 Fragaria x ananassa HOM05D002326 ORTHO05D005179 7.7e-71 271.9 226 64.6
FAN15G1241 Fragaria x ananassa HOM05D004436 ORTHO05D005179 2.3e-70 270.4 406 44.8
PSO135G0558 Papaver somniferum HOM05D004436 ORTHO05D005179 1.1e-69 268.1 403 41.9
QL05p009436 Quercus lobata HOM05D004436 ORTHO05D005179 1.1e-69 268.1 606 32.0
PSO724G1089 Papaver somniferum HOM05D004436 ORTHO05D005179 1.5e-69 267.7 401 42.1
EL10Ac7g16378 Beta vulgaris HOM05D004436 ORTHO05D005179 2.1e-68 263.8 411 38.4
EL10Ac7g16380 Beta vulgaris HOM05D004436 ORTHO05D005179 2.8e-68 263.5 409 39.1
AUR62001510 Chenopodium quinoa HOM05D004436 ORTHO05D005179 1.0e-67 261.5 418 37.8
Actinidia21779 Actinidia chinensis HOM05D004436 ORTHO05D005179 9.8e-66 255.0 398 39.9
unitig_26.g9010 Utricularia gibba HOM05D000572 ORTHO05D002399 1.3e-65 254.6 413 41.2
Peaxi162Scf00060g02815 Petunia axillaris HOM05D004436 ORTHO05D005179 1.2e-63 248.1 404 38.1
Nn6g35749 Nelumbo nucifera HOM05D004436 ORTHO05D005179 2.7e-63 246.9 405 38.5
HPP92_009424 Vanilla planifolia HOM05D004436 ORTHO05D005179 9.8e-58 228.4 407 38.1
Nitab4.5_0004287g0020 Nicotiana tabacum HOM05D004436 ORTHO05D005179 3.7e-57 226.5 390 37.9
ATR0762G049 Amborella trichopoda HOM05D004436 ORTHO05D005179 4.9e-57 226.1 414 37.7
FAN20G3048 Fragaria x ananassa HOM05D004436 ORTHO05D005179 3.2e-56 223.4 244 55.7
Lj6g0018808 Lotus japonicus HOM05D004436 ORTHO05D005179 3.4e-50 203.4 249 46.2
Zm00001eb166800 Zea mays HOM05D004436 ORTHO05D005179 4.1e-48 196.4 397 36.8
Ca_27339_v3 Cicer arietinum L. HOM05D004436 ORTHO05D005179 7.8e-47 192.2 282 42.6
TPR.G16505 Trifolium pratense HOM05D004436 ORTHO05D005179 7.8e-47 192.2 213 49.8
Carub.0003s3547 Capsella rubella HOM05D004436 ORTHO05D005179 1.0e-46 191.8 377 35.5
THA.LOC104822769 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 1.9e-45 187.6 234 44.9
Os11g0615100 Oryza sativa ssp. japonica HOM05D004436 ORTHO05D005179 7.5e-42 175.6 400 34.8
AagrBONN_evm.TU.Sc2ySwM_368.2707 Anthoceros agrestis HOM05D004436 ORTHO05D005179 2.4e-40 170.6 431 31.1
Ah.08g216510 Amaranthus hybridus HOM05D004436 ORTHO05D005179 1.6e-39 167.9 308 36.7
FAN14G1374 Fragaria x ananassa HOM05D004436 ORTHO05D005179 4.6e-39 166.4 169 59.8
Pp3c8_24340 Physcomitrium patens HOM05D004436 ORTHO05D005179 3.3e-37 160.2 434 30.9
DCAR_023423 Daucus carota HOM05D004436 ORTHO05D005179 1.6e-36 157.9 239 39.7
SEGI_22335 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 1.2e-34 151.8 301 33.6
SEGI_28110 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 3.4e-34 150.2 321 32.4
Aqoxy7G00272 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 1.1e-32 145.2 198 42.9
Aqoxy2G02914 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 1.3e-28 131.7 139 52.5
Oeu004353.1 Olea europaea HOM05D004436 ORTHO05D005179 1.3e-22 111.7 107 52.3
THA.LOC104822775 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 1.7e-22 111.3 164 40.9
CBR_g45967 Chara braunii HOM05D004436 ORTHO05D005179 1.9e-21 107.8 458 25.3
Mapoly0063s0055 Marchantia polymorpha HOM05D004436 ORTHO05D005179 5.6e-21 106.3 315 29.2
TPR.G16496 Trifolium pratense HOM05D004436 ORTHO05D005179 8.1e-20 102.4 160 36.9
Haze_06394 Corylus avellana HOM05D004436 ORTHO05D005179 1.2e-18 98.6 183 37.7
AUR62000997 Chenopodium quinoa HOM05D004436 ORTHO05D005179 2.0e-18 97.8 135 43.7
ATR0185G001 Amborella trichopoda HOM05D004436 ORTHO05D005179 2.2e-17 94.4 140 37.9
Dinv21190 Davidia involucrata HOM05D004436 ORTHO05D005179 4.2e-16 90.1 106 46.2
PGSC0003DMG400002436 Solanum tuberosum HOM05D004436 ORTHO05D005179 4.6e-15 86.7 87 51.7
AL1G64440 Arabidopsis lyrata HOM05D004436 ORTHO05D005179 1.0e-14 85.5 137 39.4
FAN05G3968 Fragaria x ananassa HOM05D004436 ORTHO05D005179 2.3e-14 84.3 55 78.2
Aqoxy2G02915 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 3.3e-13 80.5 139 38.8
SEGI_36774 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 1.2e-10 72.0 146 30.1
Peaxi162Scf01131g00007 Petunia axillaris HOM05D004436 ORTHO05D005179 2.6e-10 70.9 132 34.8
SMO144G0124 Selaginella moellendorffii HOM05D004436 ORTHO05D005179 1.0e-06 58.9 94 37.2


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