Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0164681 Rosa chinensis HOM05D001729 ORTHO05D001155 7.7e-117 423.7 197 100.0
RcHm_v2.0_Chr2g0164721 Rosa chinensis HOM05D001729 ORTHO05D001155 1.2e-69 266.9 141 90.8
FvH4_6g46280 Fragaria vesca HOM05D001729 ORTHO05D001155 2.1e-66 256.1 198 64.1
FvH4_6g46242 Fragaria vesca HOM05D001729 ORTHO05D001155 2.2e-63 246.1 199 63.8
FAN14G0370 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.2e-45 187.2 150 64.0
FvH4_6g46240 Fragaria vesca HOM05D001729 ORTHO05D001155 5.3e-33 145.2 186 43.0
Prupe.1G509300 Prunus persica HOM05D001729 ORTHO05D001155 5.3e-33 145.2 200 42.0
Prupe.3G059500 Prunus persica HOM05D001729 ORTHO05D001155 1.5e-32 143.7 198 44.4
RcHm_v2.0_Chr2g0123691 Rosa chinensis HOM05D001729 ORTHO05D001155 2.0e-32 143.3 188 44.1
RcHm_v2.0_Chr6g0275871 Rosa chinensis HOM05D001729 ORTHO05D001155 1.1e-30 137.5 207 36.7
FAN07G0471 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.6e-29 132.5 197 43.7
FvH4_6g39371 Fragaria vesca HOM05D001729 ORTHO05D001155 7.4e-27 124.8 200 42.5
FAN09G2757 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.3e-26 124.0 200 42.5
FAN14G1727 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.3e-26 124.0 200 42.5
FAN16G0429 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.3e-26 124.0 193 40.9
FAN18G1542 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.9e-25 118.2 186 39.2
FAN18G4057 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.9e-25 118.2 186 39.2
RcHm_v2.0_Chr7g0221261 Rosa chinensis HOM05D001729 ORTHO05D001155 2.0e-24 116.7 211 40.3
FAN14G5949 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.0e-23 114.4 181 43.1
FAN08G1373 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.7e-23 113.6 182 38.5
FvH4_6g46260 Fragaria vesca HOM05D001729 ORTHO05D001155 6.5e-23 111.7 191 34.6
Prupe.3G265100 Prunus persica HOM05D001729 ORTHO05D001155 1.1e-22 110.9 205 40.0
MD02G1008900 Malus domestica HOM05D001729 ORTHO05D001155 1.4e-22 110.5 207 35.3
Prupe.3G059600 Prunus persica HOM05D001729 ORTHO05D001155 1.6e-21 107.1 192 38.0
Prupe.1G510700 Prunus persica HOM05D001729 ORTHO05D001155 7.9e-21 104.8 188 36.7
FAN02G3094 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.7e-20 101.7 200 37.5
FvH4_6g45890 Fragaria vesca HOM05D001729 ORTHO05D001155 2.0e-19 100.1 200 36.5
FAN14G3193 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.0e-19 100.1 200 36.5
FAN05G2911 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.6e-19 99.8 200 36.5
RcHm_v2.0_Chr5g0021011 Rosa chinensis HOM05D001729 ORTHO05D001155 3.3e-19 99.4 210 32.9
FAN05G0810 Fragaria x ananassa HOM05D001729 ORTHO05D022617 1.7e-18 97.1 202 33.7
FvH4_6g46241 Fragaria vesca HOM05D001729 ORTHO05D001155 1.1e-17 94.4 133 39.1
FAN11G3238 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.1e-17 94.4 202 32.7
Prupe.1G512600 Prunus persica HOM05D001729 ORTHO05D001155 1.8e-17 93.6 199 33.2
MD09G1201600 Malus domestica HOM05D001729 ORTHO05D001155 5.3e-17 92.0 151 37.7
FAN11G0139 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.1e-17 91.3 138 40.6
FAN25G0589 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.2e-16 90.9 188 34.0
FAN16G0128 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.1e-14 84.3 205 32.2
FvH4_2g19920 Fragaria vesca HOM05D001729 ORTHO05D001155 4.2e-14 82.4 179 33.5
FAN24G2147 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.2e-14 82.4 179 33.5
FvH4_6g31981 Fragaria vesca HOM05D001729 ORTHO05D001155 1.6e-13 80.5 200 29.5
FvH4_6g45251 Fragaria vesca HOM05D001729 ORTHO05D001155 1.6e-13 80.5 186 36.0
FAN14G3676 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.6e-13 80.5 186 36.0
FAN27G2714 Fragaria x ananassa HOM05D001115 ORTHO05D001023 2.1e-13 80.1 177 35.0
MD02G1008700 Malus domestica HOM05D001729 ORTHO05D001155 2.1e-13 80.1 177 33.3
Prupe.1G510400 Prunus persica HOM05D001729 ORTHO05D022617 2.7e-13 79.7 97 42.3
FAN15G1054 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-12 77.4 179 33.5
FAN14G1791 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.0e-12 76.3 141 35.5
FAN21G0135 Fragaria x ananassa HOM05D005271 ORTHO05D006072 8.8e-12 74.7 195 29.7
Prupe.4G053600 Prunus persica HOM05D001729 ORTHO05D001155 2.8e-10 69.7 197 29.4
FvH4_3g44510 Fragaria vesca HOM05D001729 ORTHO05D001155 1.1e-09 67.8 201 31.8
RcHm_v2.0_Chr5g0081171 Rosa chinensis HOM05D001729 ORTHO05D001155 1.1e-09 67.8 176 30.7
FAN14G4985 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-09 67.4 187 30.5
FAN03G3155 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.8e-09 67.0 223 27.8
FAN24G0053 Fragaria x ananassa HOM05D001729 ORTHO05D022617 2.4e-09 66.6 69 49.3
FAN09G4277 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.1e-09 66.2 98 40.8
RcHm_v2.0_Chr6g0291931 Rosa chinensis HOM05D001729 ORTHO05D001155 3.1e-09 66.2 201 32.3
FvH4_2g19900 Fragaria vesca HOM05D001729 ORTHO05D022617 4.1e-09 65.9 57 54.4
RcHm_v2.0_Chr1g0380481 Rosa chinensis HOM05D001729 ORTHO05D001155 5.3e-09 65.5 205 30.2
FAN01G0708 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.6e-08 63.9 224 29.0
FAN16G2506 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.6e-08 63.2 203 29.6
FAN11G1727 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.3e-07 60.8 200 31.0
FvH4_4g31310 Fragaria vesca HOM05D001729 ORTHO05D001155 2.2e-07 60.1 186 33.3
FAN08G2539 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.5e-07 58.5 198 30.3
FAN14G2361 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.5e-07 58.2 141 30.5
FvH4_6g45260 Fragaria vesca HOM05D001729 ORTHO05D001155 1.1e-06 57.8 136 30.9
FvH4_6g40892 Fragaria vesca HOM05D001729 ORTHO05D001155 2.5e-06 56.6 161 28.6
FAN14G5808 Fragaria x ananassa HOM05D001729 ORTHO05D022617 2.5e-06 56.6 52 42.3
FvH4_7g12841 Fragaria vesca HOM05D001729 ORTHO05D001155 3.2e-06 56.2 145 32.4
FAN06G3932 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.2e-06 56.2 145 32.4
MD14G1026900 Malus domestica HOM05D001729 ORTHO05D001155 3.2e-06 56.2 210 33.3
FvH4_6g05203 Fragaria vesca HOM05D001729 ORTHO05D001155 5.5e-06 55.5 123 37.4
FvH4_7g31431 Fragaria vesca HOM05D001729 ORTHO05D001155 7.2e-06 55.1 189 29.6
FAN06G0675 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.2e-06 55.1 189 29.6
FAN06G3231 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.2e-06 55.1 189 29.6
FAN14G0440 Fragaria x ananassa HOM05D067797 ORTHO05D029400 9.4e-06 54.7 96 37.5
FAN21G1159 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.4e-06 54.7 71 42.3
FAN26G1025 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.4e-06 54.7 219 26.5
QL05p074156 Quercus lobata HOM05D001729 ORTHO05D001155 9.4e-06 54.7 129 32.6


User provided reference genes

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