Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0157311 Rosa chinensis HOM05D027418 ORTHO05D000001 6.8e-43 176.8 82 100.0
RcHm_v2.0_Chr7g0200891 Rosa chinensis HOM05D027418 ORTHO05D000001 2.9e-41 171.4 82 96.3
RcHm_v2.0_Chr2g0123741 Rosa chinensis HOM05D027418 ORTHO05D000001 2.7e-31 138.3 65 98.5
RcHm_v2.0_Chr2g0143411 Rosa chinensis HOM05D000002 ORTHO05D000001 3.3e-13 78.2 44 81.8
RcHm_v2.0_Chr3g0448581 Rosa chinensis HOM05D000015 ORTHO05D000734 3.3e-13 78.2 44 81.8
FvH4_2g15291 Fragaria vesca HOM05D000002 ORTHO05D000001 1.1e-11 73.2 84 57.1
Rhsim02G0024600 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.1e-11 73.2 64 59.4
Rhsim03G0207400 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.1e-11 71.6 64 56.2
Rhsim08G0128900 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.0e-11 71.2 68 54.4
Rhsim01G0112500 Rhododendron simsii HOM05D002151 ORTHO05D002142 1.2e-10 69.7 64 57.8
Rhsim01G0101400 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.5e-10 67.8 64 56.2
Rhsim05G0115400 Rhododendron simsii HOM05D000002 ORTHO05D000001 7.6e-10 67.0 68 51.5
TAR658G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 7.6e-10 67.0 49 57.1
Rhsim06G0083000 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.3e-09 66.2 64 56.2
TAR576G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.1e-08 63.2 50 54.0
TAR315G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.2e-08 61.6 50 56.0
Rhsim02G0135400 Rhododendron simsii HOM05D000002 ORTHO05D000001 7.1e-08 60.5 64 53.1
Thecc.04G240500 Theobroma cacao HOM05D000002 ORTHO05D000001 7.1e-08 60.5 82 46.3
Thecc.02G347700 Theobroma cacao HOM05D000002 ORTHO05D000001 9.3e-08 60.1 72 47.2
Thecc.06G134900 Theobroma cacao HOM05D000054 ORTHO05D000286 6.1e-07 57.4 72 44.4
Sopen10g008590 Solanum pennellii HOM05D000002 ORTHO05D000001 7.9e-07 57.0 69 40.6
TAR710G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 7.9e-07 57.0 59 49.2
FvH4_5g21591 Fragaria vesca HOM05D000002 ORTHO05D000001 1.3e-06 56.2 30 86.7
Lalb_Chr14g0363271 Lupinus albus HOM05D000002 ORTHO05D000001 1.3e-06 56.2 54 48.1
ECA234G2855 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 57 42.1
CSS0010067 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.1e-06 54.3 49 51.0
CSS0014475 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.1e-06 54.3 49 51.0
CSS0018650 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.1e-06 54.3 49 51.0
CSS0032372 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.1e-06 54.3 49 51.0
CAN.G279.24 Capsicum annuum HOM05D000002 ORTHO05D000001 5.1e-06 54.3 52 40.4
SEGI_00256 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.1e-06 54.3 79 34.2
SEGI_13971 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.1e-06 54.3 79 34.2
SEGI_22860 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.1e-06 54.3 79 34.2
SEGI_27153 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.1e-06 54.3 79 34.2
ECA248G2719 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.7e-06 53.5 57 40.4
MD03G1286700 Malus domestica HOM05D000002 ORTHO05D000001 8.7e-06 53.5 49 49.0


User provided reference genes

Program Settings