Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0156121 Rosa chinensis HOM05D000098 ORTHO05D000546 2.8e-39 165.2 110 100.0
FAN05G4132 Fragaria x ananassa HOM05D000098 ORTHO05D000546 1.9e-19 99.4 61 77.0
FAN14G3979 Fragaria x ananassa HOM05D000098 ORTHO05D000546 1.9e-19 99.4 61 77.0
FvH4_6g40671 Fragaria vesca HOM05D000098 ORTHO05D000546 6.0e-18 94.4 61 73.8
FAN05G4659 Fragaria x ananassa HOM05D000098 ORTHO05D000546 5.1e-17 91.3 61 72.1
RcHm_v2.0_Chr2g0156091 Rosa chinensis HOM05D000098 ORTHO05D000546 2.1e-15 85.9 46 87.0
RcHm_v2.0_Chr2g0156131 Rosa chinensis HOM05D000098 ORTHO05D000546 2.1e-15 85.9 44 86.4
Prupe.7G245800 Prunus persica HOM05D000098 ORTHO05D000546 9.3e-11 70.5 50 68.0
FvH4_1g02910 Fragaria vesca HOM05D000098 ORTHO05D000546 2.1e-10 69.3 54 57.4
FAN23G2745 Fragaria x ananassa HOM05D000098 ORTHO05D000546 2.1e-10 69.3 54 57.4
FAN26G3169 Fragaria x ananassa HOM05D000098 ORTHO05D000546 2.1e-10 69.3 54 57.4
FAN19G0847 Fragaria x ananassa HOM05D000098 ORTHO05D000546 4.6e-10 68.2 54 55.6
FAN28G2831 Fragaria x ananassa HOM05D000098 ORTHO05D000546 4.6e-10 68.2 54 55.6
RcHm_v2.0_Chr2g0088061 Rosa chinensis HOM05D000098 ORTHO05D000546 1.0e-09 67.0 51 58.8
Prupe.7G245900 Prunus persica HOM05D000098 ORTHO05D000546 1.3e-09 66.6 57 54.4
MD02G1029100 Malus domestica HOM05D000098 ORTHO05D000546 2.3e-09 65.9 52 57.7
Phvul.003G166600 Phaseolus vulgaris HOM05D000098 ORTHO05D000546 5.1e-09 64.7 59 59.3
VMungo1215G1366 Vigna mungo HOM05D000098 ORTHO05D000546 5.1e-09 64.7 59 55.9
Peaxi162Scf00891g00126 Petunia axillaris HOM05D000098 ORTHO05D000546 1.9e-08 62.8 56 53.6
Glyma.17G113000 Glycine max HOM05D000098 ORTHO05D000546 2.5e-08 62.4 59 52.5
FvH4_1g02930 Fragaria vesca HOM05D000098 ORTHO05D000546 3.3e-08 62.0 55 63.6
FAN28G0916 Fragaria x ananassa HOM05D000098 ORTHO05D000546 3.3e-08 62.0 55 63.6
PGR102G2984 Punica granatum HOM05D000098 ORTHO05D000546 4.3e-08 61.6 60 43.3
arahy.Tifrunner.gnm1.ann1.DLXF41 Arachis hypogaea HOM05D000098 ORTHO05D000546 7.3e-08 60.8 54 51.9
Glyma.06G220700 Glycine max HOM05D000098 ORTHO05D000546 1.6e-07 59.7 53 50.9
Actinidia21970 Actinidia chinensis HOM05D000098 ORTHO05D000546 2.1e-07 59.3 60 48.3
MD15G1170500 Malus domestica HOM05D000098 ORTHO05D000546 2.1e-07 59.3 53 54.7
Prupe.7G246100 Prunus persica HOM05D000098 ORTHO05D000546 2.8e-07 58.9 39 66.7
Lalb_Chr13g0301721 Lupinus albus HOM05D000098 ORTHO05D000546 4.8e-07 58.2 59 49.2
RcHm_v2.0_Chr2g0088041 Rosa chinensis HOM05D000098 ORTHO05D000546 8.1e-07 57.4 58 50.0
Actinidia40487 Actinidia chinensis HOM05D000098 ORTHO05D000546 1.1e-06 57.0 60 45.0
arahy.Tifrunner.gnm1.ann1.MZFE1X Arachis hypogaea HOM05D000098 ORTHO05D000546 1.1e-06 57.0 54 48.1
TAR625G0474 Trochodendron aralioides HOM05D000098 ORTHO05D000546 1.1e-06 57.0 54 42.6
FvH4_1g02920 Fragaria vesca HOM05D000098 ORTHO05D000546 1.8e-06 56.2 57 50.9
MD11G1227000 Malus domestica HOM05D000098 ORTHO05D000546 1.8e-06 56.2 62 48.4
Prupe.7G246400 Prunus persica HOM05D000098 ORTHO05D000546 1.8e-06 56.2 51 41.2
Psat4g037240 Pisum sativum HOM05D000098 ORTHO05D000546 2.4e-06 55.8 60 46.7
vmacro06141 Vaccinium macrocarpon HOM05D000098 ORTHO05D000546 5.3e-06 54.7 59 42.4
MSTRG.10668 Avicennia marina HOM05D000098 ORTHO05D000546 6.9e-06 54.3 54 44.4
HanXRQChr09g0241561 Helianthus annuus HOM05D000098 ORTHO05D000546 9.0e-06 53.9 61 52.5


User provided reference genes

Program Settings