Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 3.2e-195 684.9 338 100.0
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 1.4e-150 536.6 295 90.5
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.8e-148 528.5 362 77.6
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.8e-148 528.5 362 77.6
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 1.1e-139 500.4 339 76.4
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 4.7e-138 495.0 340 73.8
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 5.0e-132 474.9 342 70.5
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 4.0e-129 465.3 337 69.7
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 8.8e-129 464.2 366 66.4
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 8.8e-129 464.2 345 70.4
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 7.5e-128 461.1 343 68.5
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 1.8e-126 456.4 393 63.1
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 5.4e-126 454.9 339 68.1
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 2.0e-125 453.0 342 67.5
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 2.3e-124 449.5 337 68.0
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 5.0e-124 448.4 339 67.3
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 1.9e-123 446.4 339 67.0
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 2.5e-123 446.0 337 66.5
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 6.1e-122 441.4 347 65.7
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 1.4e-121 440.3 345 64.6
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 6.8e-121 438.0 340 64.1
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 7.5e-120 434.5 341 63.3
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 9.8e-120 434.1 347 63.1
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 8.3e-119 431.0 354 63.6
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 8.3e-119 431.0 347 64.3
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 1.6e-117 426.8 339 64.9
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 2.7e-117 426.0 341 64.5
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 3.5e-117 425.6 337 65.9
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.1e-115 420.6 240 87.5
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 4.3e-115 418.7 345 61.2
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 1.2e-114 417.2 344 63.4
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 3.1e-113 412.5 331 62.8
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 2.0e-112 409.8 337 62.3
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 5.8e-112 408.3 343 61.8
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 5.8e-112 408.3 341 62.5
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 2.9e-111 406.0 341 62.8
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 4.9e-111 405.2 354 60.2
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 8.3e-111 404.4 347 60.8
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 1.9e-110 403.3 271 73.1
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 1.9e-110 403.3 341 63.9
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 1.2e-109 400.6 347 59.9
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 1.2e-109 400.6 344 62.5
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 1.6e-109 400.2 338 60.4
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 3.5e-109 399.1 341 59.2
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 1.0e-108 397.5 350 61.4
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 2.3e-108 396.4 350 62.3
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 2.3e-108 396.4 341 61.3
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 3.9e-108 395.6 334 60.8
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 8.6e-108 394.4 348 60.9
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 7.3e-107 391.3 348 60.6
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 6.2e-106 388.3 343 59.8
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 1.1e-105 387.5 248 73.0
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 1.8e-105 386.7 347 58.8
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 2.3e-105 386.3 339 59.3
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 2.3e-105 386.3 337 61.1
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 2.3e-105 386.3 248 72.6
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 5.2e-105 385.2 239 81.2
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 1.2e-104 384.0 339 57.5
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 2.6e-104 382.9 342 61.1
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 4.4e-104 382.1 231 79.2
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 9.8e-104 380.9 308 62.7
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 9.8e-104 380.9 329 61.1
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 2.9e-103 379.4 427 50.8
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 3.7e-103 379.0 344 56.1
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 4.9e-103 378.6 336 56.5
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 8.3e-103 377.9 350 57.4
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 1.1e-102 377.5 340 56.5
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 1.1e-102 377.5 342 56.1
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 1.9e-102 376.7 349 55.9
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 9.2e-102 374.4 340 56.2
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 9.2e-102 374.4 340 56.2
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 1.2e-101 374.0 344 56.4
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 2.7e-101 372.9 327 58.4
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 2.7e-101 372.9 338 55.9
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 1.7e-100 370.2 355 54.9
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 1.9e-99 366.7 342 54.7
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 4.3e-99 365.5 368 53.3
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 7.3e-99 364.8 257 66.5
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 3.1e-97 359.4 336 58.0
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 1.2e-96 357.5 233 69.1
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 1.2e-96 357.5 258 65.9
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 2.6e-96 356.3 329 56.2
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 3.2e-94 349.4 349 54.7
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 5.1e-92 342.0 208 74.5
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 7.3e-91 338.2 240 66.7
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 1.6e-90 337.0 217 73.3
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 3.6e-90 335.9 340 56.2
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 5.2e-89 332.0 207 76.3
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 4.4e-88 328.9 322 54.0
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 9.9e-88 327.8 358 50.8
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 1.1e-83 314.3 281 60.9
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 3.6e-82 309.3 214 67.3
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 8.1e-82 308.1 275 58.9
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 1.7e-79 300.4 272 57.0
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 3.5e-77 292.7 174 78.7
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 6.0e-77 292.0 282 52.5
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 3.1e-73 279.6 259 58.7
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 6.9e-73 278.5 248 60.5
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 3.8e-71 272.7 221 56.1
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 8.4e-71 271.6 295 48.1
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 1.1e-70 271.2 256 51.6
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 1.6e-66 257.3 221 52.5
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 1.1e-65 254.6 226 54.0
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 6.9e-49 198.7 253 41.9
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 7.2e-46 188.7 109 86.2
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.4e-44 184.5 109 85.3
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 5.1e-44 182.6 211 44.1
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 1.3e-39 167.9 198 44.9
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 2.2e-34 150.6 114 64.9
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 6.1e-29 132.5 97 64.9
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 5.5e-22 109.4 167 41.3
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 1.6e-21 107.8 138 53.6
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 5.2e-12 76.3 47 70.2
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 2.4e-09 67.4 50 72.0
Oeu037217.1 Olea europaea HOM05D006836 ORTHO05D049434 3.1e-09 67.0 146 36.3
Oeu037216.1 Olea europaea HOM05D006836 ORTHO05D049434 4.1e-09 66.6 146 36.3
Mapoly0098s0053 Marchantia polymorpha HOM05D001007 ORTHO05D008005 6.6e-07 59.3 72 38.9


User provided reference genes

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