Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0154631 Rosa chinensis HOM05D000139 ORTHO05D342238 1.4e-51 206.1 109 100.0
FvH4_6g35110 Fragaria vesca HOM05D000139 ORTHO05D000103 2.5e-16 89.0 96 61.5
FAN02G3961 Fragaria x ananassa HOM05D000139 ORTHO05D000103 4.3e-16 88.2 97 58.8
FAN14G3285 Fragaria x ananassa HOM05D000139 ORTHO05D000103 7.3e-16 87.4 96 60.4
RcHm_v2.0_Chr2g0146331 Rosa chinensis HOM05D000139 ORTHO05D000103 2.8e-15 85.5 101 58.4
FAN05G3346 Fragaria x ananassa HOM05D000139 ORTHO05D000103 1.8e-14 82.8 95 58.9
FAN09G4556 Fragaria x ananassa HOM05D000139 ORTHO05D000103 4.0e-14 81.6 92 62.0
Prupe.3G038000 Prunus persica HOM05D000139 ORTHO05D000103 4.4e-13 78.2 98 53.1
MD17G1164500 Malus domestica HOM05D000139 ORTHO05D000103 1.1e-11 73.6 98 51.0
Aqoxy7G01014 Aquilegia oxysepala HOM05D000139 ORTHO05D000103 3.3e-08 62.0 83 49.4
Cfa003514 Carpinus fangiana HOM05D000139 ORTHO05D000103 4.3e-08 61.6 85 50.6
CiPaw.02G134100 Carya illinoinensis HOM05D000139 ORTHO05D000103 4.3e-08 61.6 91 49.5
Haze_16061 Corylus avellana HOM05D000139 ORTHO05D000103 1.6e-07 59.7 85 50.6
CsaV3_3G030800 Cucumis sativus L. HOM05D000139 ORTHO05D000103 2.1e-07 59.3 92 48.9
MELO3C022677.2 Cucumis melo HOM05D000139 ORTHO05D000103 3.6e-07 58.5 87 50.6
Manes.04G147700 Manihot esculenta HOM05D000139 ORTHO05D000103 3.6e-07 58.5 87 49.4
COL.COLO4_30788 Corchorus olitorius HOM05D000139 ORTHO05D000103 8.0e-07 57.4 89 42.7
Hma1.2p1_0229F.1_g096720 Hydrangea macrophylla HOM05D000139 ORTHO05D000103 1.1e-06 57.0 86 47.7
CiPaw.01G216400 Carya illinoinensis HOM05D000139 ORTHO05D000103 1.8e-06 56.2 85 47.1
Migut.I01102 Erythranthe guttata HOM05D000139 ORTHO05D000103 3.1e-06 55.5 80 48.8
Lj9P534T43 Lonicera japonica HOM05D000139 ORTHO05D000103 3.1e-06 55.5 83 49.4
Manes.11G016900 Manihot esculenta HOM05D000139 ORTHO05D000103 3.1e-06 55.5 84 47.6
Actinidia32201 Actinidia chinensis HOM05D000139 ORTHO05D000103 4.0e-06 55.1 84 45.2
ClCG07G014500 Citrullus lanatus HOM05D000139 ORTHO05D000103 4.0e-06 55.1 87 46.0
Actinidia21801 Actinidia chinensis HOM05D000139 ORTHO05D000103 5.2e-06 54.7 87 46.0
Nn8g38587 Nelumbo nucifera HOM05D000139 ORTHO05D000103 5.2e-06 54.7 93 41.9
Lalb_Chr04g0253701 Lupinus albus HOM05D000139 ORTHO05D000103 8.9e-06 53.9 91 46.2


User provided reference genes

Program Settings