Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0151321 Rosa chinensis HOM05D014182 ORTHO05D017018 2.9e-95 352.1 202 100.0
RcHm_v2.0_Chr2g0151281 Rosa chinensis HOM05D014182 ORTHO05D017018 3.6e-77 292.0 202 85.6
RcHm_v2.0_Chr2g0151211 Rosa chinensis HOM05D014182 ORTHO05D017018 1.8e-76 289.7 202 81.7
RcHm_v2.0_Chr2g0151231 Rosa chinensis HOM05D014182 ORTHO05D017018 2.3e-60 236.1 120 85.0
FvH4_6g38111 Fragaria vesca HOM05D014182 ORTHO05D017018 4.4e-43 178.7 209 63.2
RcHm_v2.0_Chr5g0038691 Rosa chinensis HOM05D014182 ORTHO05D017018 4.3e-22 109.0 93 52.7
FvH4_6g38112 Fragaria vesca HOM05D014182 ORTHO05D017018 9.6e-22 107.8 84 59.5
RcHm_v2.0_Chr5g0038581 Rosa chinensis HOM05D014182 ORTHO05D017018 1.3e-18 97.4 93 50.5
RcHm_v2.0_Chr6g0246181 Rosa chinensis HOM05D014182 ORTHO05D341309 6.5e-18 95.1 94 46.8
MD05G1007600 Malus domestica HOM05D052046 ORTHO05D017018 2.1e-13 80.1 99 40.4
RcHm_v2.0_Chr2g0170041 Rosa chinensis HOM05D008754 ORTHO05D013321 1.1e-12 77.8 69 46.4
MD05G1007300 Malus domestica HOM05D052046 ORTHO05D017018 6.9e-12 75.1 91 44.0
FvH4_6g01091 Fragaria vesca HOM05D008754 ORTHO05D045983 2.9e-10 69.7 71 46.5
FAN05G3012 Fragaria x ananassa HOM05D008754 ORTHO05D045983 3.8e-10 69.3 73 43.8
FAN02G1481 Fragaria x ananassa HOM05D008754 ORTHO05D035449 6.5e-10 68.6 83 37.3
FAN02G2204 Fragaria x ananassa HOM05D008754 ORTHO05D029566 1.1e-09 67.8 72 38.9
FAN02G4257 Fragaria x ananassa HOM05D008754 ORTHO05D029566 1.1e-09 67.8 72 38.9
FvH4_6g48861 Fragaria vesca HOM05D008754 ORTHO05D035449 1.9e-09 67.0 72 40.3
FAN05G0612 Fragaria x ananassa HOM05D008754 ORTHO05D035449 1.9e-09 67.0 72 40.3
RcHm_v2.0_Chr5g0054291 Rosa chinensis HOM05D014182 ORTHO05D035364 5.5e-09 65.5 93 34.4
FvH4_1g02310 Fragaria vesca HOM05D008754 ORTHO05D029566 7.1e-09 65.1 72 37.5
FvH4_6g49870 Fragaria vesca HOM05D008754 ORTHO05D013321 2.1e-08 63.5 71 39.4
FvH4_6g49880 Fragaria vesca HOM05D008754 ORTHO05D013321 2.1e-08 63.5 71 39.4
FAN14G1080 Fragaria x ananassa HOM05D008754 ORTHO05D013321 2.1e-08 63.5 71 39.4
FvH4_6g19630 Fragaria vesca HOM05D008754 ORTHO05D029566 2.7e-08 63.2 72 36.1
FAN02G4357 Fragaria x ananassa HOM05D008754 ORTHO05D013321 1.0e-07 61.2 69 43.5
FAN12G1812 Fragaria x ananassa HOM05D008754 ORTHO05D013321 2.3e-07 60.1 71 39.4
FAN09G4820 Fragaria x ananassa HOM05D008754 ORTHO05D046512 5.1e-07 58.9 76 38.2
RcHm_v2.0_Chr5g0013591 Rosa chinensis HOM05D017196 ORTHO05D026743 5.1e-07 58.9 89 33.7
FvH4_5g26960 Fragaria vesca HOM05D008754 ORTHO05D013321 6.7e-07 58.5 72 41.7
FvH4_5g26990 Fragaria vesca HOM05D008754 ORTHO05D013321 6.7e-07 58.5 72 41.7
FAN13G0543 Fragaria x ananassa HOM05D008754 ORTHO05D013321 6.7e-07 58.5 72 41.7
FvH4_4g04530 Fragaria vesca HOM05D008754 ORTHO05D013321 1.5e-06 57.4 72 41.7
FAN02G0077 Fragaria x ananassa HOM05D008754 ORTHO05D013321 1.5e-06 57.4 68 39.7
FAN12G2900 Fragaria x ananassa HOM05D008754 ORTHO05D013321 1.5e-06 57.4 72 41.7
FvH4_6g49020 Fragaria vesca HOM05D008754 ORTHO05D046512 1.9e-06 57.0 74 37.8
FAN14G2320 Fragaria x ananassa HOM05D008754 ORTHO05D035536 1.9e-06 57.0 74 37.8
FvH4_6g49040 Fragaria vesca HOM05D008754 ORTHO05D025422 2.5e-06 56.6 71 36.6
FAN05G0409 Fragaria x ananassa HOM05D008754 ORTHO05D013321 5.7e-06 55.5 49 49.0
FvH4_6g49060 Fragaria vesca HOM05D008754 ORTHO05D025422 7.4e-06 55.1 71 35.2
FAN09G2670 Fragaria x ananassa HOM05D008754 ORTHO05D025422 7.4e-06 55.1 71 35.2
FAN14G0439 Fragaria x ananassa HOM05D008754 ORTHO05D025422 7.4e-06 55.1 71 35.2


User provided reference genes

Program Settings