Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0149371 Rosa chinensis HOM05D007715 ORTHO05D009760 2.3e-139 498.8 237 100.0
FvH4_6g36931 Fragaria vesca HOM05D007715 ORTHO05D009760 7.8e-132 473.8 237 94.5
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.7e-131 472.6 237 94.5
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 8.7e-131 470.3 237 94.1
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 3.3e-130 468.4 237 93.2
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.8e-129 465.3 237 93.2
MD09G1165400 Malus domestica HOM05D007715 ORTHO05D009760 2.0e-119 432.6 237 85.7
Thecc.06G056700 Theobroma cacao HOM05D007715 ORTHO05D009760 1.1e-117 426.8 237 84.0
Manes.14G008300 Manihot esculenta HOM05D007715 ORTHO05D009760 1.9e-117 426.0 237 82.7
Duzib235G0054 Durio zibethinus HOM05D007715 ORTHO05D009760 6.0e-116 421.0 238 82.8
CANSAT01G2071 Cannabis sativa HOM05D007715 ORTHO05D009760 3.9e-115 418.3 237 81.0
Haze_16178 Corylus avellana HOM05D007715 ORTHO05D009760 1.3e-113 413.3 239 80.3
Cfa003439 Carpinus fangiana HOM05D007715 ORTHO05D009760 2.8e-113 412.1 239 80.3
Gohir.D06G121500 Gossypium hirsutum HOM05D007715 ORTHO05D009760 2.8e-113 412.1 233 81.5
Gorai.010G141800 Gossypium raimondii HOM05D007715 ORTHO05D009760 1.1e-112 410.2 233 81.1
Ciclev10032622m.g Citrus clementina HOM05D007715 ORTHO05D009760 1.8e-112 409.5 237 80.2
TAR383G0241 Trochodendron aralioides HOM05D007715 ORTHO05D009760 6.9e-112 407.5 233 80.3
MD17G1162300 Malus domestica HOM05D007715 ORTHO05D009760 4.5e-111 404.8 226 82.7
Eucgr.F04031 Eucalyptus grandis HOM05D007715 ORTHO05D009760 2.9e-110 402.1 237 77.6
Potri.008G004500 Populus trichocarpa HOM05D007715 ORTHO05D009760 6.4e-110 401.0 237 77.6
CSS0043564 Camellia sinensis var. sinensis HOM05D007715 ORTHO05D009760 1.6e-108 396.4 235 77.0
Nn2g12750 Nelumbo nucifera HOM05D007715 ORTHO05D009760 4.6e-108 394.8 237 77.6
Hma1.2p1_1111F.1_g258440 Hydrangea macrophylla HOM05D007715 ORTHO05D009760 1.3e-107 393.3 238 77.7
GSVIVG01029551001 Vitis vinifera HOM05D007715 ORTHO05D009760 1.9e-106 389.4 237 77.2
Actinidia38809 Actinidia chinensis HOM05D007715 ORTHO05D009760 2.5e-106 389.0 235 75.7
MBI16_g18218_MAGBIO Magnolia biondii HOM05D007715 ORTHO05D009760 2.5e-106 389.0 229 77.3
vmacro18742 Vaccinium macrocarpon HOM05D007715 ORTHO05D009760 1.3e-105 386.7 240 75.8
Atru.BG.168.p Acer truncatum HOM05D007715 ORTHO05D009760 2.1e-105 386.0 211 83.4
PGR102G0299 Punica granatum HOM05D007715 ORTHO05D009760 2.1e-105 386.0 229 77.7
CiPaw.02G129300 Carya illinoinensis HOM05D007715 ORTHO05D009760 3.7e-105 385.2 239 75.3
EL10Ac7g18154 Beta vulgaris HOM05D007715 ORTHO05D009760 4.0e-104 381.7 237 73.8
AUR62025668 Chenopodium quinoa HOM05D007715 ORTHO05D009760 1.5e-103 379.8 232 74.6
QL05p088896 Quercus lobata HOM05D007715 ORTHO05D009760 1.0e-102 377.1 292 63.4
CiPaw.01G208900 Carya illinoinensis HOM05D007715 ORTHO05D009760 1.3e-102 376.7 229 76.4
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 1.3e-102 376.7 231 74.9
Aqoxy7G02738 Aquilegia oxysepala HOM05D007715 ORTHO05D009760 1.7e-102 376.3 233 73.0
Cpa.g.sc176.1 Carica papaya HOM05D007715 ORTHO05D009760 4.9e-102 374.8 256 67.6
Cc04_g00030 Coffea canephora HOM05D007715 ORTHO05D009760 6.5e-102 374.4 238 73.9
PSO423G0174 Papaver somniferum HOM05D007715 ORTHO05D009760 1.9e-101 372.9 224 75.4
Oeu049631.2 Olea europaea HOM05D007715 ORTHO05D009760 3.2e-101 372.1 237 72.2
Oeu049632.1 Olea europaea HOM05D007715 ORTHO05D009760 3.2e-101 372.1 237 72.2
AUR62001337 Chenopodium quinoa HOM05D007715 ORTHO05D009760 6.0e-100 367.9 237 73.0
CDE05G1192 Ceratophyllum demersum HOM05D007715 ORTHO05D004987 3.9e-99 365.2 233 71.7
Lsat_1_v5_gn_4_89140 Lactuca sativa HOM05D007715 ORTHO05D009760 9.7e-98 360.5 238 69.3
Medtr4g005360 Medicago truncatula HOM05D007715 ORTHO05D009760 3.7e-97 358.6 221 72.9
SalBow6G7190 Salvia bowleyana HOM05D007715 ORTHO05D009760 4.1e-96 355.1 226 70.4
Hund18594 Selenicereus undatus HOM05D007715 ORTHO05D009760 1.5e-95 353.2 255 66.7
PGSC0003DMG400009165 Solanum tuberosum HOM05D007715 ORTHO05D009760 1.5e-95 353.2 228 72.4
ATR0626G044 Amborella trichopoda HOM05D007715 ORTHO05D009760 1.0e-94 350.5 225 70.7
Lalb_Chr01g0011671 Lupinus albus HOM05D007715 ORTHO05D009760 2.5e-93 345.9 242 69.0
SGA_v2.0_scaffold71G23984 Striga asiatica HOM05D007715 ORTHO05D009760 3.2e-93 345.5 224 69.2
Lj3g0002381 Lotus japonicus HOM05D007715 ORTHO05D009760 1.6e-92 343.2 237 67.1
Rhsim08G0250500 Rhododendron simsii HOM05D007715 ORTHO05D009760 2.1e-92 342.8 235 69.8
Psat7g265440 Pisum sativum HOM05D007715 ORTHO05D009760 1.3e-89 333.6 222 67.1
Sabra08G0002100 Salix brachista HOM05D007715 ORTHO05D009760 2.8e-89 332.4 237 67.5
Migut.I01201 Erythranthe guttata HOM05D007715 ORTHO05D009760 1.8e-88 329.7 239 64.9
Zm00001eb102140 Zea mays HOM05D007715 ORTHO05D009760 9.1e-88 327.4 224 63.8
HPP92_017384 Vanilla planifolia HOM05D007715 ORTHO05D009760 1.5e-87 326.6 205 69.8
Duzib192G0685 Durio zibethinus HOM05D007715 ORTHO05D009760 1.0e-86 323.9 174 86.2
Sp3g18290 Schrenkiella parvula HOM05D007715 ORTHO05D009760 1.4e-85 320.1 237 63.3
SEGI_32597 Sequoiadendron giganteum HOM05D007715 ORTHO05D009760 3.2e-85 318.9 229 64.6
Glyma.08G224700 Glycine max HOM05D007715 ORTHO05D009760 4.2e-85 318.5 231 64.9
Thhalv10020156m.g Eutrema salsugineum HOM05D003198 ORTHO05D009760 1.3e-81 307.0 234 64.1
FAN20G1905 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.8e-81 305.8 156 94.2
AagrBONN_evm.TU.Sc2ySwM_228.4113 Anthoceros agrestis HOM05D007715 ORTHO05D009760 1.1e-80 303.9 228 59.2
VMungo0331G1382 Vigna mungo HOM05D007715 ORTHO05D009760 4.5e-79 298.5 233 62.7
C05p44060 Brassica napus HOM05D007715 ORTHO05D009760 1.3e-78 297.0 237 59.9
Pp3c3_690 Physcomitrium patens HOM05D007715 ORTHO05D009760 2.9e-78 295.8 232 57.8
Nitab4.5_0005739g0020 Nicotiana tabacum HOM05D007715 ORTHO05D009760 6.5e-78 294.7 180 76.7
A05p28660 Brassica napus HOM05D007715 ORTHO05D009760 1.5e-77 293.5 237 59.1
BraA05t21742Z Brassica rapa HOM05D007715 ORTHO05D009760 9.4e-77 290.8 237 58.6
Mapoly0008s0087 Marchantia polymorpha HOM05D007715 ORTHO05D009760 1.8e-75 286.6 222 59.9
BolC5t33128H Brassica oleracea HOM05D007715 ORTHO05D009760 6.7e-75 284.6 232 59.1
Phvul.010G164200 Phaseolus vulgaris HOM05D007715 ORTHO05D009760 5.3e-72 275.0 247 56.7
MSTRG.22499 Avicennia marina HOM05D007715 ORTHO05D009760 2.5e-69 266.2 182 68.1
Lj9C542G6 Lonicera japonica HOM05D007715 ORTHO05D009760 1.8e-67 260.0 237 55.3
Prupe.3G023100 Prunus persica HOM05D007715 ORTHO05D009760 3.0e-59 232.6 124 87.1
Gohir.A06G117200 Gossypium hirsutum HOM05D007715 ORTHO05D009760 1.2e-58 230.7 136 78.7
Dinv20335 Davidia involucrata HOM05D007715 ORTHO05D009760 1.5e-58 230.3 135 77.8
PSO423G0098 Papaver somniferum HOM05D007715 ORTHO05D009760 7.7e-55 218.0 135 73.3
COL.COLO4_31152 Corchorus olitorius HOM05D007715 ORTHO05D009760 3.8e-54 215.7 111 87.4
Nitab4.5_0005664g0070 Nicotiana tabacum HOM05D007715 ORTHO05D009760 3.4e-50 202.6 197 53.3
Carub.0003s2020 Capsella rubella HOM05D007715 ORTHO05D009760 1.6e-44 183.7 132 62.9
Peaxi162Scf00038g02642 Petunia axillaris HOM05D007715 ORTHO05D009760 8.0e-44 181.4 102 80.4
SMO201G0133 Selaginella moellendorffii HOM05D007715 ORTHO05D009760 2.0e-42 176.8 198 46.0
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 7.8e-39 164.9 135 57.8
Sopen03g041710 Solanum pennellii HOM05D007715 ORTHO05D009760 8.9e-27 124.8 205 39.5
TPR.G38750 Trifolium pratense HOM05D007715 ORTHO05D009760 3.2e-24 116.3 85 58.8
TPR.G38822 Trifolium pratense HOM05D007715 ORTHO05D009760 7.1e-24 115.2 86 64.0
Os09g0497600 Oryza sativa ssp. japonica HOM05D007715 ORTHO05D009760 4.3e-21 105.9 76 53.9
Medtr4g005380 Medicago truncatula HOM05D007715 ORTHO05D009760 9.6e-21 104.8 79 51.9
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 2.2e-17 93.6 87 56.3
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 2.2e-17 93.6 58 70.7
AL3G33970 Arabidopsis lyrata HOM05D007715 ORTHO05D009760 3.2e-08 63.2 49 59.2
Solyc03g123970.1 Solanum lycopersicum HOM05D007715 ORTHO05D009760 5.4e-08 62.4 51 64.7


User provided reference genes

Program Settings