Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 1.4e-176 622.9 323 100.0
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 7.3e-165 583.9 323 92.6
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 9.6e-165 583.6 323 92.3
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 3.4e-162 575.1 323 91.6
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 2.2e-153 545.8 323 84.8
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 8.7e-150 533.9 324 84.0
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 2.0e-130 469.5 337 73.6
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 3.8e-129 465.3 337 73.0
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.2e-128 462.2 323 73.4
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 1.2e-127 460.3 323 74.3
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.1e-127 459.5 323 73.1
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.3e-126 456.1 323 72.8
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.9e-125 453.0 323 72.8
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 7.4e-125 451.1 345 69.0
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 4.1e-123 445.3 339 75.8
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 9.1e-123 444.1 331 68.9
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 4.5e-122 441.8 323 70.9
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 1.3e-121 440.3 336 69.0
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 2.9e-121 439.1 321 70.4
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 2.9e-121 439.1 332 70.8
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 3.8e-121 438.7 324 71.0
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 3.8e-121 438.7 321 70.4
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 1.1e-120 437.2 329 70.8
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 4.2e-120 435.3 323 69.7
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 2.7e-119 432.6 329 69.6
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 3.6e-119 432.2 319 70.8
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 6.1e-119 431.4 333 69.4
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 3.0e-118 429.1 332 67.5
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 5.1e-118 428.3 321 71.7
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 2.0e-117 426.4 325 69.2
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 3.3e-117 425.6 323 68.4
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 4.4e-117 425.2 328 68.3
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 5.7e-117 424.9 326 67.8
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 1.7e-116 423.3 303 71.0
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 2.4e-115 419.5 329 68.7
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 3.1e-115 419.1 303 71.6
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 9.1e-115 417.5 322 68.6
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 4.5e-114 415.2 330 66.4
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 3.8e-113 412.1 328 64.6
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 8.5e-113 411.0 294 76.2
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 2.7e-111 406.0 332 66.3
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 3.6e-111 405.6 313 66.5
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 3.6e-111 405.6 338 64.8
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 7.9e-111 404.4 327 65.7
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.0e-110 404.1 323 68.1
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 1.0e-110 404.1 331 64.4
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 1.4e-110 403.7 324 67.3
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 2.3e-110 402.9 328 67.4
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 1.5e-109 400.2 326 64.4
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 9.7e-109 397.5 327 63.9
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 8.2e-108 394.4 326 65.6
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 5.3e-107 391.7 325 63.1
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 1.2e-106 390.6 318 64.5
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 1.7e-105 386.7 315 66.3
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 3.2e-104 382.5 336 61.3
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 3.2e-104 382.5 332 62.7
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 3.2e-104 382.5 325 66.8
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 1.6e-103 380.2 372 57.5
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 8.0e-103 377.9 322 63.7
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 1.4e-102 377.1 324 63.3
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 8.8e-102 374.4 294 69.4
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 1.2e-101 374.0 275 70.9
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 3.3e-101 372.5 339 63.1
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 2.2e-100 369.8 302 65.2
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 8.2e-100 367.9 294 68.0
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 1.8e-99 366.7 316 62.7
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 9.1e-99 364.4 297 63.6
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.0e-97 358.6 321 62.6
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 7.2e-96 354.8 329 61.1
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 4.4e-93 345.5 294 63.9
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 2.2e-92 343.2 274 68.2
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 3.1e-91 339.3 365 53.4
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 2.0e-90 336.7 327 58.1
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 1.0e-89 334.3 307 60.3
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 6.5e-89 331.6 276 62.0
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 6.1e-87 325.1 338 57.4
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 2.6e-85 319.7 211 73.0
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.8e-84 316.2 276 62.3
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 8.3e-84 314.7 212 73.6
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 5.4e-83 312.0 225 68.9
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 1.2e-82 310.8 296 55.7
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 8.6e-81 304.7 323 51.1
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 6.1e-79 298.5 216 70.8
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.7e-76 289.3 323 55.4
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.9e-76 288.9 320 53.8
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.4e-75 286.6 323 53.6
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.0e-75 285.0 190 72.6
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 9.2e-75 284.6 344 51.2
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.8e-74 281.6 227 68.3
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.5e-72 277.3 270 57.0
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 4.7e-71 272.3 325 52.9
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.7e-66 256.5 175 73.1
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 7.8e-66 255.0 273 56.0
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 6.6e-65 251.9 179 72.1
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 4.4e-61 239.2 370 40.0
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 1.4e-54 217.6 173 67.6
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 2.1e-50 203.8 128 76.6
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 4.6e-50 202.6 163 63.2
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 3.9e-49 199.5 175 61.1
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 1.9e-48 197.2 274 39.8
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 5.2e-46 189.1 222 45.0
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 4.2e-43 179.5 292 40.1
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 5.1e-41 172.6 148 58.1
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 4.9e-28 129.4 249 35.7
BcaC05g25534 Brassica carinata HOM05D000163 ORTHO05D000219 1.5e-21 107.8 101 58.4
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 3.5e-18 96.7 98 52.0
Medtr2g105710 Medicago truncatula HOM05D007396 ORTHO05D009228 1.3e-17 94.7 71 70.4
Actinidia31121 Actinidia chinensis HOM05D007396 ORTHO05D009228 2.8e-15 87.0 87 59.8
Cre07.g325721 Chlamydomonas reinhardtii HOM05D007396 ORTHO05D009228 3.4e-13 80.1 332 28.3
SEGI_36165 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 3.9e-09 66.6 42 78.6
SEGI_21917 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 3.7e-07 60.1 39 71.8


User provided reference genes

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