Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0148461 Rosa chinensis HOM05D008705 ORTHO05D000669 5.4e-47 190.7 96 100.0
RcHm_v2.0_Chr4g0385011 Rosa chinensis HOM05D008705 ORTHO05D000669 1.8e-34 149.1 82 90.2
FAN17G1365 Fragaria x ananassa HOM05D008705 ORTHO05D000669 2.9e-32 141.7 87 77.0
FAN20G1055 Fragaria x ananassa HOM05D008705 ORTHO05D001863 1.9e-31 139.0 83 78.3
FvH4_4g15892 Fragaria vesca HOM05D008705 ORTHO05D000669 2.4e-31 138.7 81 80.2
FAN10G2090 Fragaria x ananassa HOM05D008705 ORTHO05D000669 4.1e-31 137.9 83 78.3
FAN09G3738 Fragaria x ananassa HOM05D008705 ORTHO05D001863 5.4e-31 137.5 82 79.3
FAN10G3855 Fragaria x ananassa HOM05D008705 ORTHO05D000669 5.4e-31 137.5 82 79.3
RcHm_v2.0_Chr2g0106131 Rosa chinensis HOM05D008705 ORTHO05D000669 3.1e-26 121.7 87 66.7
RcHm_v2.0_Chr3g0486961 Rosa chinensis HOM05D008705 ORTHO05D000669 1.5e-25 119.4 88 64.8
RcHm_v2.0_Chr3g0476041 Rosa chinensis HOM05D008705 ORTHO05D000669 2.0e-25 119.0 79 70.9
RcHm_v2.0_Chr2g0102381 Rosa chinensis HOM05D008705 ORTHO05D000669 8.3e-24 113.6 77 67.5
FvH4_2g08145 Fragaria vesca HOM05D008705 ORTHO05D000669 1.5e-17 92.8 82 56.1
FAN20G2701 Fragaria x ananassa HOM05D008705 ORTHO05D000669 1.5e-17 92.8 82 56.1
FAN09G1129 Fragaria x ananassa HOM05D008705 ORTHO05D000669 2.0e-17 92.4 80 56.2
FAN15G0639 Fragaria x ananassa HOM05D008705 ORTHO05D000669 2.0e-17 92.4 80 56.2
FvH4_4g05492 Fragaria vesca HOM05D008705 ORTHO05D000669 1.3e-16 89.7 82 54.9
RcHm_v2.0_Chr0c17g0499961 Rosa chinensis HOM05D008705 ORTHO05D000669 2.8e-11 72.0 39 87.2
Lj1A283G17 Lonicera japonica HOM05D008705 ORTHO05D000669 2.4e-10 68.9 79 41.8
FAN12G3968 Fragaria x ananassa HOM05D008705 ORTHO05D000669 7.6e-09 63.9 36 75.0
RcHm_v2.0_Chr1g0345631 Rosa chinensis HOM05D008705 ORTHO05D000669 1.9e-07 59.3 39 66.7
RcHm_v2.0_Chr1g0381191 Rosa chinensis HOM05D008705 ORTHO05D000669 1.9e-07 59.3 39 66.7
RcHm_v2.0_Chr7g0214031 Rosa chinensis HOM05D008705 ORTHO05D000669 1.9e-07 59.3 39 66.7
Rhsim04G0111400 Rhododendron simsii HOM05D009565 ORTHO05D012252 9.3e-07 57.0 77 39.0
Rhsim03G0038000 Rhododendron simsii HOM05D009565 ORTHO05D012252 2.1e-06 55.8 77 39.0
Rhsim12G0114600 Rhododendron simsii HOM05D009565 ORTHO05D012252 4.6e-06 54.7 77 37.7
Rhsim10G0126600 Rhododendron simsii HOM05D009565 ORTHO05D012252 6.0e-06 54.3 90 32.2
PSO384G0881 Papaver somniferum HOM05D017761 ORTHO05D000669 7.8e-06 53.9 61 41.0


User provided reference genes

Program Settings