Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0148201 Rosa chinensis HOM05D004795 ORTHO05D005518 1.4e-117 426.4 225 100.0
FAN14G2363 Fragaria x ananassa HOM05D004795 ORTHO05D005518 1.4e-85 320.1 229 81.7
FAN14G5069 Fragaria x ananassa HOM05D004795 ORTHO05D005518 1.4e-85 320.1 229 81.7
FAN05G2248 Fragaria x ananassa HOM05D004795 ORTHO05D005518 5.2e-85 318.2 229 81.7
FAN02G3195 Fragaria x ananassa HOM05D004795 ORTHO05D005518 3.4e-84 315.5 227 81.5
FvH4_6g36230 Fragaria vesca HOM05D004795 ORTHO05D005518 1.4e-82 310.1 231 79.7
FAN09G4185 Fragaria x ananassa HOM05D004795 ORTHO05D005518 1.1e-79 300.4 231 78.4
Prupe.3G143600 Prunus persica HOM05D004795 ORTHO05D005518 7.9e-49 198.0 230 61.7
MD09G1253700 Malus domestica HOM05D004795 ORTHO05D005518 1.9e-47 193.4 241 58.5
CiPaw.03G062800 Carya illinoinensis HOM05D004795 ORTHO05D005518 1.4e-45 187.2 228 61.4
MD17G1245500 Malus domestica HOM05D004795 ORTHO05D005518 1.8e-45 186.8 232 59.5
Cfa007915 Carpinus fangiana HOM05D004795 ORTHO05D005518 9.0e-45 184.5 228 60.5
QL02p051034 Quercus lobata HOM05D004795 ORTHO05D005518 1.9e-42 176.8 236 56.4
QL12p016552 Quercus lobata HOM05D004795 ORTHO05D005518 1.9e-42 176.8 236 56.4
Thecc.04G132300 Theobroma cacao HOM05D004795 ORTHO05D005518 7.9e-41 171.4 229 57.6
COL.COLO4_09348 Corchorus olitorius HOM05D004795 ORTHO05D005518 1.0e-40 171.0 229 55.9
CiPaw.04G043000 Carya illinoinensis HOM05D004795 ORTHO05D005518 3.9e-40 169.1 228 57.9
Duzib133G0847 Durio zibethinus HOM05D004795 ORTHO05D005518 6.7e-40 168.3 230 55.7
Manes.02G069600 Manihot esculenta HOM05D004795 ORTHO05D005518 6.7e-40 168.3 223 57.0
Haze_14167 Corylus avellana HOM05D004795 ORTHO05D005518 1.5e-39 167.2 228 57.5
TWI53G1522 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 2.1e-38 163.3 224 54.9
Manes.01G111300 Manihot esculenta HOM05D004795 ORTHO05D005518 1.8e-37 160.2 227 54.6
TWI77G0518 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 3.1e-37 159.5 227 54.2
Duzib211G0180 Durio zibethinus HOM05D004795 ORTHO05D005518 6.9e-37 158.3 226 53.5
CANSAT78G0274 Cannabis sativa HOM05D004795 ORTHO05D005518 3.4e-36 156.0 227 55.5
Duzib138G0938 Durio zibethinus HOM05D004795 ORTHO05D005518 4.5e-36 155.6 229 53.3
TAR629G1480 Trochodendron aralioides HOM05D004795 ORTHO05D005518 1.3e-35 154.1 226 53.1
Atru.chr1.1662 Acer truncatum HOM05D004795 ORTHO05D005518 2.2e-35 153.3 219 54.3
Sabra04G0081300 Salix brachista HOM05D004795 ORTHO05D005518 1.4e-34 150.6 221 52.9
Cpa.g.sc170.57 Carica papaya HOM05D004795 ORTHO05D005518 2.5e-34 149.8 235 52.3
Sabra17G0096100 Salix brachista HOM05D004795 ORTHO05D005518 3.2e-34 149.4 244 51.6
Glyma.13G045200 Glycine max HOM05D004795 ORTHO05D005518 9.3e-34 147.9 222 49.1
VMungo0464G1679 Vigna mungo HOM05D004795 ORTHO05D005518 2.1e-33 146.7 219 49.8
Potri.017G116100 Populus trichocarpa HOM05D004795 ORTHO05D005518 3.5e-33 146.0 243 51.4
Gohir.D11G325800 Gossypium hirsutum HOM05D004795 ORTHO05D005518 4.6e-33 145.6 229 50.7
TAR622G0902 Trochodendron aralioides HOM05D004795 ORTHO05D005518 4.6e-33 145.6 222 51.4
PGR004G2449 Punica granatum HOM05D004795 ORTHO05D005518 1.3e-32 144.1 233 47.6
arahy.Tifrunner.gnm1.ann1.HZ9SBP Arachis hypogaea HOM05D001490 ORTHO05D005518 1.8e-32 143.7 235 48.9
Ciclev10012794m.g Citrus clementina HOM05D004795 ORTHO05D005518 1.8e-32 143.7 209 54.1
VMungo1383G1737 Vigna mungo HOM05D004795 ORTHO05D005518 1.8e-32 143.7 215 51.6
Glyma.18G295700 Glycine max HOM05D004795 ORTHO05D005518 2.3e-32 143.3 218 53.7
ClCG05G012330 Citrullus lanatus HOM05D004795 ORTHO05D005518 3.0e-32 142.9 224 54.9
CsaV3_3G020240 Cucumis sativus L. HOM05D004795 ORTHO05D005518 5.1e-32 142.1 225 52.9
Gohir.D11G325700 Gossypium hirsutum HOM05D004795 ORTHO05D005518 1.1e-31 141.0 220 50.9
Nitab4.5_0000912g0060 Nicotiana tabacum HOM05D004795 ORTHO05D005518 2.5e-31 139.8 236 45.8
Nn3g17899 Nelumbo nucifera HOM05D004795 ORTHO05D005518 5.7e-31 138.7 224 50.9
Eucgr.J01506 Eucalyptus grandis HOM05D004795 ORTHO05D005518 7.4e-31 138.3 227 48.5
Phvul.008G007200 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 7.4e-31 138.3 215 52.1
Cc07_g08730 Coffea canephora HOM05D004795 ORTHO05D005518 1.6e-30 137.1 236 47.9
Gohir.D11G326300 Gossypium hirsutum HOM05D004795 ORTHO05D005518 2.2e-30 136.7 235 47.2
CAN.G625.30 Capsicum annuum HOM05D004795 ORTHO05D005518 1.4e-29 134.0 241 44.0
Sopen02g030830 Solanum pennellii HOM05D004795 ORTHO05D005518 1.4e-29 134.0 235 46.0
Dinv33956 Davidia involucrata HOM05D001490 ORTHO05D001450 4.1e-29 132.5 200 54.0
PGR042G3836 Punica granatum HOM05D004795 ORTHO05D005518 6.9e-29 131.7 188 52.7
PGSC0003DMG402026390 Solanum tuberosum HOM05D004795 ORTHO05D005518 6.9e-29 131.7 235 46.0
DCAR_025909 Daucus carota HOM05D004795 ORTHO05D005518 1.5e-28 130.6 234 46.6
Sed0015257 Sechium edule HOM05D004795 ORTHO05D005518 3.4e-28 129.4 222 50.5
MELO3C023735.2 Cucumis melo HOM05D004795 ORTHO05D005518 1.3e-27 127.5 199 51.8
Glyma.08G366700 Glycine max HOM05D004795 ORTHO05D005518 2.9e-27 126.3 194 51.5
TAR371G0696 Trochodendron aralioides HOM05D004795 ORTHO05D005518 2.9e-27 126.3 204 50.5
Phvul.004G066100 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 5.5e-26 122.1 219 46.6
Glyma.19G049900 Glycine max HOM05D004795 ORTHO05D005518 7.2e-26 121.7 223 43.5
Peaxi162Scf00394g00712 Petunia axillaris HOM05D004795 ORTHO05D005518 7.2e-26 121.7 191 48.7
MSTRG.3555 Avicennia marina HOM05D004795 ORTHO05D005518 2.7e-25 119.8 252 42.9
Gohir.A11G163900 Gossypium hirsutum HOM05D004795 ORTHO05D005518 3.6e-25 119.4 198 48.0
Gorai.007G182000 Gossypium raimondii HOM05D004795 ORTHO05D005518 2.3e-24 116.7 198 47.5
BraA02t06447Z Brassica rapa HOM05D004795 ORTHO05D005518 3.0e-24 116.3 245 41.6
Lj2g0010000 Lotus japonicus HOM05D004795 ORTHO05D005518 5.1e-24 115.5 219 45.2
Rhsim10G0068600 Rhododendron simsii HOM05D004795 ORTHO05D005518 6.7e-24 115.2 245 43.7
Sp5g21970 Schrenkiella parvula HOM05D004795 ORTHO05D005518 8.8e-24 114.8 246 39.8
Lj1g0003158 Lotus japonicus HOM05D004795 ORTHO05D005518 2.5e-23 113.2 191 49.7
Hma1.2p1_1109F.1_g258120 Hydrangea macrophylla HOM05D004795 ORTHO05D005518 3.3e-23 112.8 235 42.6
THA.LOC104805574 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 3.3e-23 112.8 252 40.5
Ca_08078_v3 Cicer arietinum L. HOM05D004795 ORTHO05D005518 4.3e-23 112.5 197 48.2
Aqoxy3G00247 Aquilegia oxysepala HOM05D004795 ORTHO05D005518 5.7e-23 112.1 221 43.4
BcaB05g24226 Brassica carinata HOM05D004795 ORTHO05D005518 5.7e-23 112.1 242 40.1
Oeu039734.1 Olea europaea HOM05D004795 ORTHO05D005518 9.7e-23 111.3 205 43.9
Aa31LG9G17140 Aethionema arabicum HOM05D004795 ORTHO05D005518 1.7e-22 110.5 247 42.5
C02p22330 Brassica napus HOM05D004795 ORTHO05D005518 4.8e-22 109.0 216 42.1
BcaC03g14785 Brassica carinata HOM05D004795 ORTHO05D005518 1.1e-21 107.8 225 41.8
Ah.16g101690 Amaranthus hybridus HOM05D004795 ORTHO05D005518 1.4e-21 107.5 194 42.8
Aa31LG2G3430 Aethionema arabicum HOM05D004795 ORTHO05D005518 2.4e-21 106.7 244 37.7
BcaB06g27183 Brassica carinata HOM05D004795 ORTHO05D005518 3.1e-21 106.3 243 41.2
BolC2t08386H Brassica oleracea HOM05D004795 ORTHO05D005518 4.1e-21 105.9 225 41.8
Thhalv10019032m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 9.1e-21 104.8 224 41.5
Migut.L00330 Erythranthe guttata HOM05D004795 ORTHO05D005518 1.5e-20 104.0 234 41.9
THA.LOC104822635 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 1.5e-20 104.0 245 41.2
BcaC02g09641 Brassica carinata HOM05D004795 ORTHO05D005518 2.0e-20 103.6 244 38.9
BolC4t26077H Brassica oleracea HOM05D004795 ORTHO05D005518 2.0e-20 103.6 245 38.8
Gohir.A12G054400 Gossypium hirsutum HOM05D004795 ORTHO05D005518 2.0e-20 103.6 181 47.0
Gohir.D12G053200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 2.0e-20 103.6 181 46.4
Gorai.008G056400 Gossypium raimondii HOM05D004795 ORTHO05D005518 2.0e-20 103.6 181 46.4
A04p11270 Brassica napus HOM05D004795 ORTHO05D005518 2.6e-20 103.2 245 38.8
BraA04t16787Z Brassica rapa HOM05D004795 ORTHO05D005518 2.6e-20 103.2 245 38.8
Oeu016627.1 Olea europaea HOM05D004795 ORTHO05D005518 7.7e-20 101.7 220 41.4
AT1G67035 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 5.0e-19 99.0 213 42.3
Thhalv10027906m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 5.0e-19 99.0 244 40.2
Oeu050378.1 Olea europaea HOM05D004795 ORTHO05D005518 6.5e-19 98.6 223 41.3
CARHR214290 Cardamine hirsuta HOM05D004795 ORTHO05D005518 4.2e-18 95.9 220 40.0
Gorai.001G202200 Gossypium raimondii HOM05D004795 ORTHO05D005518 4.2e-18 95.9 164 47.0
Sc11g0008370 Simmondsia chinensis HOM05D004795 ORTHO05D005518 4.2e-18 95.9 187 41.2
BraA07t31003Z Brassica rapa HOM05D004795 ORTHO05D005518 1.2e-17 94.4 224 40.6
AT5G38300 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 1.6e-17 94.0 263 36.1
C04p44990 Brassica napus HOM05D004795 ORTHO05D005518 2.1e-17 93.6 250 37.2
A07p33770 Brassica napus HOM05D004795 ORTHO05D005518 3.6e-17 92.8 225 40.0
Gohir.D11G170200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 3.6e-17 92.8 264 36.4
Medtr6g018780 Medicago truncatula HOM05D004795 ORTHO05D005518 1.0e-16 91.3 127 55.9
AL7G52500 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 1.4e-16 90.9 237 38.0
Sp7g03720 Schrenkiella parvula HOM05D004795 ORTHO05D005518 1.4e-16 90.9 251 37.8
Lsat_1_v5_gn_4_154580 Lactuca sativa HOM05D004795 ORTHO05D005518 1.8e-16 90.5 231 42.4
Gorai.007G356700 Gossypium raimondii HOM05D004795 ORTHO05D005518 2.3e-16 90.1 188 42.0
Lalb_Chr10g0091311 Lupinus albus HOM05D004795 ORTHO05D005518 3.0e-16 89.7 200 41.5
Carub.0005s1274 Capsella rubella HOM05D004795 ORTHO05D005518 6.7e-16 88.6 228 37.3
TPR.G31528 Trifolium pratense HOM05D004795 ORTHO05D005518 8.8e-16 88.2 206 42.7
Psat3g098240 Pisum sativum HOM05D004795 ORTHO05D005518 1.1e-15 87.8 174 44.3
Lalb_Chr02g0158191 Lupinus albus HOM05D004795 ORTHO05D005518 1.5e-15 87.4 204 42.6
BolC6t39123H Brassica oleracea HOM05D004795 ORTHO05D005518 3.3e-15 86.3 202 41.6
HanXRQChr11g0330661 Helianthus annuus HOM05D004795 ORTHO05D005518 4.4e-15 85.9 173 45.1
C06p43160 Brassica napus HOM05D004795 ORTHO05D005518 7.4e-15 85.1 225 37.3
Carub.0002s1332 Capsella rubella HOM05D004795 ORTHO05D005518 2.2e-14 83.6 202 41.1
AL2G25370 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 2.8e-14 83.2 201 39.8
Solyc02g086140.2 Solanum lycopersicum HOM05D004795 ORTHO05D005518 2.8e-14 83.2 123 49.6
MBI09_g36997_MAGBIO Magnolia biondii HOM05D004795 ORTHO05D005518 6.3e-14 82.0 215 40.5
Nitab4.5_0004416g0090 Nicotiana tabacum HOM05D004795 ORTHO05D005518 1.8e-13 80.5 193 41.5
BcaNung06250 Brassica carinata HOM05D004795 ORTHO05D005518 1.6e-12 77.4 198 38.4
CARHR059450 Cardamine hirsuta HOM05D004795 ORTHO05D005518 2.6e-12 76.6 194 39.2
Potri.004G098200 Populus trichocarpa HOM05D004795 ORTHO05D005518 2.6e-12 76.6 129 46.5
Medtr7g082230 Medicago truncatula HOM05D004795 ORTHO05D005518 3.5e-12 76.3 200 40.0
SGA_v2.0_scaffold115G32104 Striga asiatica HOM05D004795 ORTHO05D005518 4.5e-12 75.9 176 40.3
PSO532G0010 Papaver somniferum HOM05D004795 ORTHO05D005518 7.7e-12 75.1 152 38.8
AUR62043981 Chenopodium quinoa HOM05D004795 ORTHO05D005518 1.0e-11 74.7 271 33.2
Ah.06g188560 Amaranthus hybridus HOM05D004795 ORTHO05D005518 1.7e-11 73.9 147 38.1
PSO541G1476 Papaver somniferum HOM05D004795 ORTHO05D005518 5.0e-11 72.4 155 36.1
HanXRQChr11g0325401 Helianthus annuus HOM05D004795 ORTHO05D005518 8.5e-11 71.6 195 42.6
TPR.G32442 Trifolium pratense HOM05D004795 ORTHO05D005518 1.1e-10 71.2 336 31.5
Gohir.D11G325975 Gossypium hirsutum HOM05D004795 ORTHO05D005518 1.5e-10 70.9 89 52.8
ECA232G0641 Erigeron canadensis HOM05D000072 ORTHO05D000026 1.2e-09 67.8 134 47.0
PSO541G4271 Papaver somniferum HOM05D004795 ORTHO05D005518 6.1e-09 65.5 154 35.7
AUR62023290 Chenopodium quinoa HOM05D004795 ORTHO05D005518 1.8e-08 63.9 311 28.9
AUR62009011 Chenopodium quinoa HOM05D004795 ORTHO05D005518 2.3e-08 63.5 309 29.4
CAN.G358.61 Capsicum annuum HOM05D004795 ORTHO05D005518 6.7e-08 62.0 90 50.0
Thecc.07G096700 Theobroma cacao HOM05D004795 ORTHO05D002259 6.7e-08 62.0 120 47.5
Psat1g081000 Pisum sativum HOM05D004795 ORTHO05D005518 1.1e-07 61.2 274 31.8
ATR0752G028 Amborella trichopoda HOM05D004795 ORTHO05D005518 2.2e-06 57.0 183 32.2


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