Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0147741 Rosa chinensis HOM05D008314 ORTHO05D010369 3.8e-48 194.5 97 100.0
FAN09G4263 Fragaria x ananassa HOM05D008314 ORTHO05D010369 3.4e-41 171.4 99 86.9
FvH4_6g35740 Fragaria vesca HOM05D008314 ORTHO05D010369 7.6e-41 170.2 99 85.9
FAN05G1710 Fragaria x ananassa HOM05D008314 ORTHO05D010369 1.4e-39 166.0 99 84.8
FAN02G2954 Fragaria x ananassa HOM05D008314 ORTHO05D010369 4.3e-36 154.5 97 79.4
Prupe.3G031600 Prunus persica HOM05D008314 ORTHO05D010369 1.3e-21 106.3 104 59.6
CSS0041009 Camellia sinensis var. sinensis HOM05D008314 ORTHO05D010369 4.0e-18 94.7 95 58.9
Oeu008398.2 Olea europaea HOM05D008314 ORTHO05D010369 1.0e-16 90.1 93 53.8
QL05p001376 Quercus lobata HOM05D008314 ORTHO05D010369 1.7e-16 89.4 95 53.7
Cc04_g00790 Coffea canephora HOM05D008314 ORTHO05D010369 2.9e-16 88.6 88 52.3
Manes.11G013300 Manihot esculenta HOM05D008314 ORTHO05D010369 3.8e-16 88.2 96 50.0
Dinv37824 Davidia involucrata HOM05D008314 ORTHO05D010369 4.9e-16 87.8 93 54.8
Cpa.g.sc25.184 Carica papaya HOM05D008314 ORTHO05D010369 1.4e-15 86.3 93 50.5
Duzib235G1505 Durio zibethinus HOM05D008314 ORTHO05D010369 1.4e-15 86.3 93 52.7
Nn6g35721 Nelumbo nucifera HOM05D008314 ORTHO05D010369 1.9e-15 85.9 93 47.3
CiPaw.01G212000 Carya illinoinensis HOM05D008314 ORTHO05D010369 7.1e-15 84.0 96 53.1
Oeu059021.1 Olea europaea HOM05D008314 ORTHO05D010369 7.1e-15 84.0 93 53.8
Thecc.03G325500 Theobroma cacao HOM05D008314 ORTHO05D010369 1.6e-14 82.8 93 49.5
Potri.003G072000 Populus trichocarpa HOM05D008314 ORTHO05D010369 3.5e-14 81.6 95 48.4
Actinidia24433 Actinidia chinensis HOM05D008314 ORTHO05D010369 7.9e-14 80.5 93 50.5
Rhsim08G0244000 Rhododendron simsii HOM05D008314 ORTHO05D010369 1.3e-13 79.7 99 49.5
Phvul.010G123800 Phaseolus vulgaris HOM05D008314 ORTHO05D010369 1.8e-13 79.3 93 47.3
SalBow6G0833 Salvia bowleyana HOM05D008314 ORTHO05D010369 1.8e-13 79.3 84 50.0
arahy.Tifrunner.gnm1.ann1.K03VIU Arachis hypogaea HOM05D008314 ORTHO05D010369 3.0e-13 78.6 97 43.3
arahy.Tifrunner.gnm1.ann1.0KI29H Arachis hypogaea HOM05D008314 ORTHO05D010369 3.9e-13 78.2 97 43.3
ClCG09G001340 Citrullus lanatus HOM05D008314 ORTHO05D010369 3.9e-13 78.2 96 47.9
Rhsim12G0213100 Rhododendron simsii HOM05D008314 ORTHO05D010369 3.9e-13 78.2 93 50.5
Atru.chr1.4110 Acer truncatum HOM05D008314 ORTHO05D010369 8.7e-13 77.0 98 46.9
PSO135G0082 Papaver somniferum HOM05D008314 ORTHO05D010369 1.5e-12 76.3 85 47.1
MELO3C024311.2 Cucumis melo HOM05D008314 ORTHO05D010369 1.9e-12 75.9 98 45.9
Gohir.A06G143350 Gossypium hirsutum HOM05D008314 ORTHO05D010369 1.9e-12 75.9 94 47.9
MBI13_g01687_MAGBIO Magnolia biondii HOM05D008314 ORTHO05D010369 2.5e-12 75.5 63 55.6
Duzib160G0115 Durio zibethinus HOM05D008314 ORTHO05D010369 3.3e-12 75.1 84 47.6
Glyma.16G013200 Glycine max HOM05D008314 ORTHO05D010369 3.3e-12 75.1 93 49.5
TWI14G0587 Tripterygium wilfordii HOM05D008314 ORTHO05D010369 3.3e-12 75.1 93 46.2
PSO724G1385 Papaver somniferum HOM05D008314 ORTHO05D010369 4.3e-12 74.7 83 39.8
TAR070G0001 Trochodendron aralioides HOM05D008314 ORTHO05D010369 4.3e-12 74.7 81 49.4
Sed0005090 Sechium edule HOM05D008314 ORTHO05D010369 5.7e-12 74.3 96 46.9
Thecc.06G129300 Theobroma cacao HOM05D008314 ORTHO05D010369 5.7e-12 74.3 93 47.3
Lalb_Chr17g0343301 Lupinus albus HOM05D008314 ORTHO05D010369 7.4e-12 73.9 83 49.4
Gohir.D06G149000 Gossypium hirsutum HOM05D008314 ORTHO05D010369 1.3e-11 73.2 94 46.8
COL.COLO4_30857 Corchorus olitorius HOM05D008314 ORTHO05D010369 2.8e-11 72.0 70 54.3
Gorai.010G173500 Gossypium raimondii HOM05D008314 ORTHO05D010369 2.8e-11 72.0 95 46.3
MD09G1173500 Malus domestica HOM05D008314 ORTHO05D010369 3.7e-11 71.6 94 47.9
CsaV3_7G033990 Cucumis sativus L. HOM05D008314 ORTHO05D010369 4.8e-11 71.2 78 51.3
Duzib160G0571 Durio zibethinus HOM05D008314 ORTHO05D010369 1.4e-10 69.7 93 46.2
ATR0099G003 Amborella trichopoda HOM05D008314 ORTHO05D010369 2.6e-09 65.5 82 40.2
CiPaw.01G212100 Carya illinoinensis HOM05D008314 ORTHO05D010369 2.6e-09 65.5 104 41.3
Medtr8g022990 Medicago truncatula HOM05D008314 ORTHO05D010369 2.6e-09 65.5 85 43.5
Ciclev10026853m.g Citrus clementina HOM05D008314 ORTHO05D010369 4.5e-09 64.7 96 45.8
Ciclev10027008m.g Citrus clementina HOM05D008314 ORTHO05D010369 7.6e-09 63.9 91 46.2
Oeu059020.1 Olea europaea HOM05D008314 ORTHO05D010369 1.3e-08 63.2 36 75.0
AUR62001414 Chenopodium quinoa HOM05D008314 ORTHO05D010369 2.2e-08 62.4 92 38.0
Psat4g165800 Pisum sativum HOM05D008314 ORTHO05D010369 2.2e-08 62.4 33 72.7
AUR62025623 Chenopodium quinoa HOM05D008314 ORTHO05D010369 5.0e-08 61.2 96 34.4
Os02g0564600 Oryza sativa ssp. japonica HOM05D008314 ORTHO05D010369 6.5e-08 60.8 35 65.7
Os03g0400700 Oryza sativa ssp. japonica HOM05D008314 ORTHO05D010369 6.5e-08 60.8 82 41.5
Zm00001eb019440 Zea mays HOM05D008314 ORTHO05D010369 8.5e-08 60.5 56 46.4
SEGI_24113 Sequoiadendron giganteum HOM05D042000 ORTHO05D010369 1.9e-07 59.3 47 48.9
SEGI_28829 Sequoiadendron giganteum HOM05D008314 ORTHO05D010369 1.9e-07 59.3 55 47.3
SEGI_18497 Sequoiadendron giganteum HOM05D042000 ORTHO05D010369 4.2e-07 58.2 43 53.5
SEGI_22804 Sequoiadendron giganteum HOM05D042000 ORTHO05D010369 7.9e-06 53.9 61 41.0


User provided reference genes

Program Settings