Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0145321 Rosa chinensis HOM05D005693 ORTHO05D006826 2.5e-56 221.9 111 100.0
RcHm_v2.0_Chr3g0479521 Rosa chinensis HOM05D005693 ORTHO05D006826 4.3e-40 167.9 86 97.7
FvH4_6g22170 Fragaria vesca HOM05D005693 ORTHO05D006826 2.1e-39 165.6 87 95.4
Prupe.7G077600 Prunus persica HOM05D005693 ORTHO05D006826 9.0e-38 160.2 87 90.8
MD14G1055100 Malus domestica HOM05D005693 ORTHO05D006826 3.4e-37 158.3 87 90.8
Oeu063873.1 Olea europaea HOM05D005693 ORTHO05D006826 4.9e-36 154.5 86 88.4
Ciclev10011987m.g Citrus clementina HOM05D005693 ORTHO05D006826 8.4e-36 153.7 86 90.7
MD12G1056600 Malus domestica HOM05D005693 ORTHO05D006826 8.4e-36 153.7 87 88.5
CANSAT64G1199 Cannabis sativa HOM05D005693 ORTHO05D006826 1.1e-35 153.3 87 87.4
Lju124A25T35 Lonicera japonica HOM05D005693 ORTHO05D006826 1.1e-35 153.3 90 82.2
Eucgr.A02454 Eucalyptus grandis HOM05D005693 ORTHO05D006826 1.4e-35 152.9 85 90.6
Haze_20000 Corylus avellana HOM05D005693 ORTHO05D006826 1.9e-35 152.5 87 86.2
Haze_20002 Corylus avellana HOM05D005693 ORTHO05D006826 1.9e-35 152.5 87 86.2
Dinv24066 Davidia involucrata HOM05D005693 ORTHO05D006826 4.2e-35 151.4 87 86.2
CiPaw.09G046600 Carya illinoinensis HOM05D005693 ORTHO05D006826 5.4e-35 151.0 87 85.1
DCAR_013542 Daucus carota HOM05D005693 ORTHO05D006826 5.4e-35 151.0 85 89.4
Aa31LG3G6280 Aethionema arabicum HOM05D005693 ORTHO05D006826 7.1e-35 150.6 98 77.6
PSO339G5051 Papaver somniferum HOM05D005693 ORTHO05D006826 9.3e-35 150.2 87 82.8
Atru.chr8.1120 Acer truncatum HOM05D005693 ORTHO05D006826 1.2e-34 149.8 89 83.1
Ah.13g075810 Amaranthus hybridus HOM05D005693 ORTHO05D006826 1.2e-34 149.8 85 89.4
Gohir.A01G191200 Gossypium hirsutum HOM05D005693 ORTHO05D006826 1.2e-34 149.8 86 83.7
Manes.09G035800 Manihot esculenta HOM05D005693 ORTHO05D006826 1.2e-34 149.8 85 88.2
Thhalv10020889m.g Eutrema salsugineum HOM05D005693 ORTHO05D006826 2.1e-34 149.1 87 87.4
Hma1.2p1_0648F.1_g195113 Hydrangea macrophylla HOM05D005693 ORTHO05D006826 2.1e-34 149.1 87 82.8
PGR004G1521 Punica granatum HOM05D005693 ORTHO05D006826 2.1e-34 149.1 86 87.2
Sc19g0006040 Simmondsia chinensis HOM05D005693 ORTHO05D006826 2.7e-34 148.7 87 83.9
BcaB06g25545 Brassica carinata HOM05D005693 ORTHO05D006826 3.5e-34 148.3 87 86.2
Nitab4.5_0004458g0020 Nicotiana tabacum HOM05D005693 ORTHO05D006826 3.5e-34 148.3 84 85.7
BcaC05g29290 Brassica carinata HOM05D005693 ORTHO05D006826 4.6e-34 147.9 87 86.2
C05p55720 Brassica napus HOM05D005693 ORTHO05D006826 4.6e-34 147.9 87 86.2
BolC5t34239H Brassica oleracea HOM05D005693 ORTHO05D006826 4.6e-34 147.9 87 86.2
AUR62015362 Chenopodium quinoa HOM05D005693 ORTHO05D006826 4.6e-34 147.9 86 87.2
Potri.016G045200 Populus trichocarpa HOM05D005693 ORTHO05D006826 4.6e-34 147.9 87 83.9
Sabra16G0049200 Salix brachista HOM05D005693 ORTHO05D006826 4.6e-34 147.9 87 83.9
TPR.G18210 Trifolium pratense HOM05D005693 ORTHO05D006826 4.6e-34 147.9 86 86.0
AL3G23730 Arabidopsis lyrata HOM05D005693 ORTHO05D006826 6.0e-34 147.5 87 85.1
ClCG10G017580 Citrullus lanatus HOM05D005693 ORTHO05D006826 6.0e-34 147.5 86 83.7
COL.COLO4_33976 Corchorus olitorius HOM05D005693 ORTHO05D006826 6.0e-34 147.5 87 82.8
Duzib128G0858 Durio zibethinus HOM05D005693 ORTHO05D006826 6.0e-34 147.5 87 83.9
Psat3g068360 Pisum sativum HOM05D005693 ORTHO05D006826 6.0e-34 147.5 86 83.7
BraA05t22521Z Brassica rapa HOM05D005693 ORTHO05D006826 7.9e-34 147.1 87 85.1
Sp3g10330 Schrenkiella parvula HOM05D005693 ORTHO05D006826 7.9e-34 147.1 87 86.2
MSTRG.6485 Avicennia marina HOM05D005693 ORTHO05D006826 1.0e-33 146.7 86 84.9
EL10Ac3g06910 Beta vulgaris HOM05D005693 ORTHO05D006826 1.0e-33 146.7 86 87.2
A05p37250 Brassica napus HOM05D005693 ORTHO05D006826 1.0e-33 146.7 87 85.1
Medtr7g093290 Medicago truncatula HOM05D005693 ORTHO05D006826 1.0e-33 146.7 86 84.9
THA.LOC104799293 Tarenaya hassleriana HOM05D005693 ORTHO05D006826 1.0e-33 146.7 87 86.2
Solyc03g063320.3 Solanum lycopersicum HOM05D005693 ORTHO05D006826 1.3e-33 146.4 84 84.5
Sopen03g015940 Solanum pennellii HOM05D005693 ORTHO05D006826 1.3e-33 146.4 84 84.5
arahy.Tifrunner.gnm1.ann1.C1QR5S Arachis hypogaea HOM05D005693 ORTHO05D006826 1.8e-33 146.0 86 84.9
arahy.Tifrunner.gnm1.ann1.F8DN54 Arachis hypogaea HOM05D005693 ORTHO05D006826 1.8e-33 146.0 86 84.9
Carub.0003s1144 Capsella rubella HOM05D005693 ORTHO05D006826 1.8e-33 146.0 87 83.9
PSO384G0754 Papaver somniferum HOM05D005693 ORTHO05D006826 1.8e-33 146.0 87 80.5
Hund24794 Selenicereus undatus HOM05D005693 ORTHO05D006826 1.8e-33 146.0 87 83.9
Thecc.05G172100 Theobroma cacao HOM05D005693 ORTHO05D006826 1.8e-33 146.0 87 80.5
AUR62012025 Chenopodium quinoa HOM05D005693 ORTHO05D006826 2.3e-33 145.6 86 84.9
Gorai.002G224200 Gossypium raimondii HOM05D005693 ORTHO05D006826 2.3e-33 145.6 87 80.5
Nitab4.5_0001137g0070 Nicotiana tabacum HOM05D005693 ORTHO05D006826 2.3e-33 145.6 84 83.3
Peaxi162Scf00258g00724 Petunia axillaris HOM05D005693 ORTHO05D006826 2.3e-33 145.6 87 81.6
TWI53G1089 Tripterygium wilfordii HOM05D005693 ORTHO05D006826 2.3e-33 145.6 87 81.6
CSS0003318 Camellia sinensis var. sinensis HOM05D005693 ORTHO05D006826 3.0e-33 145.2 87 85.1
CSS0050183 Camellia sinensis var. sinensis HOM05D005693 ORTHO05D006826 3.0e-33 145.2 87 85.1
Cc06_g15820 Coffea canephora HOM05D005693 ORTHO05D006826 3.0e-33 145.2 85 82.4
Gohir.D01G178700 Gossypium hirsutum HOM05D005693 ORTHO05D006826 3.0e-33 145.2 87 80.5
Lalb_Chr18g0047901 Lupinus albus HOM05D005693 ORTHO05D006826 3.0e-33 145.2 84 86.9
MELO3C009620.2 Cucumis melo HOM05D005693 ORTHO05D006826 3.9e-33 144.8 88 79.5
ATR0807G195 Amborella trichopoda HOM05D005693 ORTHO05D006826 5.1e-33 144.4 87 83.9
CsaV3_3G038750 Cucumis sativus L. HOM05D005693 ORTHO05D006826 5.1e-33 144.4 86 81.4
Phvul.001G142750 Phaseolus vulgaris HOM05D005693 ORTHO05D006826 5.1e-33 144.4 86 86.0
PGSC0003DMG400014975 Solanum tuberosum HOM05D005693 ORTHO05D006826 5.1e-33 144.4 83 84.3
AT3G12100 Arabidopsis thaliana HOM05D005693 ORTHO05D006826 6.7e-33 144.1 87 82.8
Glyma.19G148200 Glycine max HOM05D005693 ORTHO05D006826 6.7e-33 144.1 86 86.0
CAN.G87.1 Capsicum annuum HOM05D005693 ORTHO05D006826 1.1e-32 143.3 84 83.3
Migut.J01840 Erythranthe guttata HOM05D005693 ORTHO05D006826 1.1e-32 143.3 86 82.6
Sed0000696 Sechium edule HOM05D005693 ORTHO05D006826 1.1e-32 143.3 86 80.2
Glyma.03G145200 Glycine max HOM05D005693 ORTHO05D006826 1.5e-32 142.9 86 84.9
Cpa.g.sc85.51 Carica papaya HOM05D005693 ORTHO05D006826 1.9e-32 142.5 87 85.1
GSVIVG01033491001 Vitis vinifera HOM05D005693 ORTHO05D006826 2.5e-32 142.1 87 79.3
Lj1g0019099 Lotus japonicus HOM05D005693 ORTHO05D006826 5.6e-32 141.0 86 83.7
Actinidia32396 Actinidia chinensis HOM05D005693 ORTHO05D006826 7.4e-32 140.6 87 80.5
Aqoxy1G00128 Aquilegia oxysepala HOM05D005693 ORTHO05D006826 1.6e-31 139.4 86 81.4
Lsat_1_v5_gn_8_75420 Lactuca sativa HOM05D005693 ORTHO05D006826 1.6e-31 139.4 86 83.7
SalBow6G0162 Salvia bowleyana HOM05D005693 ORTHO05D006826 1.6e-31 139.4 86 80.2
SEGI_14579 Sequoiadendron giganteum HOM05D005693 ORTHO05D006826 2.1e-31 139.0 86 79.1
Ca_08527_v3 Cicer arietinum L. HOM05D005693 ORTHO05D006826 2.8e-31 138.7 84 83.3
FAN27G0418 Fragaria x ananassa HOM05D005693 ORTHO05D006826 6.2e-31 137.5 73 94.5
HanXRQChr05g0132951 Helianthus annuus HOM05D005693 ORTHO05D006826 1.4e-30 136.3 87 79.3
ECA236G1678 Erigeron canadensis HOM05D005693 ORTHO05D006826 1.8e-30 136.0 86 77.9
CDE05G1621 Ceratophyllum demersum HOM05D005693 ORTHO05D006826 2.4e-30 135.6 86 76.7
Zm00001eb190540 Zea mays HOM05D005693 ORTHO05D006826 3.1e-30 135.2 86 77.9
Nn7g36005 Nelumbo nucifera HOM05D005693 ORTHO05D006826 1.5e-29 132.9 67 95.5
vmacro07901 Vaccinium macrocarpon HOM05D005693 ORTHO05D006826 2.0e-29 132.5 87 75.9
unitig_744.g24644 Utricularia gibba HOM05D001741 ORTHO05D002196 4.5e-29 131.3 96 68.8
SGA_v2.0_scaffold69G23060 Striga asiatica HOM05D005693 ORTHO05D006826 5.8e-29 131.0 119 62.2
HPP92_009025 Vanilla planifolia HOM05D005693 ORTHO05D006826 3.8e-28 128.3 86 74.4
HPP92_009079 Vanilla planifolia HOM05D005693 ORTHO05D006826 3.8e-28 128.3 86 74.4
Manes.11G017601 Manihot esculenta HOM05D005693 ORTHO05D006826 5.5e-27 124.4 74 82.4
Manes.17G026624 Manihot esculenta HOM05D005693 ORTHO05D006826 5.5e-27 124.4 74 82.4
AagrBONN_evm.TU.Sc2ySwM_368.2514 Anthoceros agrestis HOM05D005693 ORTHO05D006826 2.1e-26 122.5 87 69.0
SMO196G0199 Selaginella moellendorffii HOM05D005693 ORTHO05D006826 3.5e-26 121.7 83 72.3
TAR623G1103 Trochodendron aralioides HOM05D005693 ORTHO05D006826 3.5e-26 121.7 73 83.6
CARHR086660 Cardamine hirsuta HOM05D005693 ORTHO05D006826 7.9e-26 120.6 73 83.6
VMungo1383G3018 Vigna mungo HOM05D005693 ORTHO05D006826 1.8e-25 119.4 75 80.0
FAN25G3535 Fragaria x ananassa HOM05D011417 ORTHO05D006826 5.1e-25 117.9 73 84.9
Mapoly0031s0152 Marchantia polymorpha HOM05D005693 ORTHO05D006826 1.5e-24 116.3 87 64.4
Glyma.14G019600 Glycine max HOM05D005693 ORTHO05D006826 1.9e-24 115.9 72 83.3
Pp3c19_16310 Physcomitrium patens HOM05D005693 ORTHO05D006826 3.3e-24 115.2 87 63.2
CBR_g23093 Chara braunii HOM05D005693 ORTHO05D006826 9.0e-22 107.1 78 66.7
QL07p023915 Quercus lobata HOM05D005693 ORTHO05D006826 1.4e-19 99.8 51 92.2
QL93p0118_0012 Quercus lobata HOM05D005693 ORTHO05D006826 1.4e-19 99.8 51 92.2
Lsat_1_v5_gn_8_18181 Lactuca sativa HOM05D005693 ORTHO05D006826 2.2e-15 85.9 60 78.3
HanXRQChr08g0219081 Helianthus annuus HOM05D005693 ORTHO05D006826 3.4e-13 78.6 57 73.7
arahy.Tifrunner.gnm1.ann1.WY0JR2 Arachis hypogaea HOM05D005693 ORTHO05D015958 6.5e-12 74.3 54 70.4
Solyc02g067620.3 Solanum lycopersicum HOM05D006555 ORTHO05D008376 2.3e-09 65.9 83 38.6
PGSC0003DMG400006943 Solanum tuberosum HOM05D006555 ORTHO05D008376 2.3e-09 65.9 83 38.6
Nitab4.5_0001727g0060 Nicotiana tabacum HOM05D006555 ORTHO05D008376 3.9e-09 65.1 83 37.3
SMO141G0163 Selaginella moellendorffii HOM05D006555 ORTHO05D008376 1.1e-08 63.5 84 33.3
QL07p023907 Quercus lobata HOM05D005693 ORTHO05D006826 2.5e-08 62.4 39 79.5
QL93p0118_0004 Quercus lobata HOM05D005693 ORTHO05D006826 2.5e-08 62.4 39 79.5
TPR.G27718 Trifolium pratense HOM05D006555 ORTHO05D008376 2.5e-08 62.4 81 38.3
Atru.chr5.2645 Acer truncatum HOM05D005693 ORTHO05D006826 3.3e-08 62.0 48 66.7
Atru.chr9.1297 Acer truncatum HOM05D005693 ORTHO05D006826 3.3e-08 62.0 48 66.7
SalBow1G4248 Salvia bowleyana HOM05D006555 ORTHO05D008376 4.3e-08 61.6 81 37.0
Glyma.08G102000 Glycine max HOM05D006555 ORTHO05D008376 5.7e-08 61.2 81 37.0
SEGI_26593 Sequoiadendron giganteum HOM05D006555 ORTHO05D008376 5.7e-08 61.2 81 35.8
Ca_19526_v3 Cicer arietinum L. HOM05D006555 ORTHO05D008376 7.4e-08 60.8 81 37.0
Gohir.A07G217400 Gossypium hirsutum HOM05D006555 ORTHO05D008376 7.4e-08 60.8 81 35.8
Gohir.D07G224400 Gossypium hirsutum HOM05D006555 ORTHO05D008376 7.4e-08 60.8 81 35.8
Gorai.001G258800 Gossypium raimondii HOM05D006555 ORTHO05D008376 7.4e-08 60.8 81 35.8
MD17G1042100 Malus domestica HOM05D006555 ORTHO05D008376 7.4e-08 60.8 81 37.0
Medtr6g463330 Medicago truncatula HOM05D006555 ORTHO05D008376 7.4e-08 60.8 81 37.0
Phvul.002G176300 Phaseolus vulgaris HOM05D006555 ORTHO05D008376 7.4e-08 60.8 81 35.8
Psat1g109920 Pisum sativum HOM05D006555 ORTHO05D008376 7.4e-08 60.8 81 37.0
Prupe.3G277100 Prunus persica HOM05D006555 ORTHO05D008376 1.7e-07 59.7 81 37.0
Ciclev10014254m.g Citrus clementina HOM05D006555 ORTHO05D008376 2.2e-07 59.3 81 35.8
Potri.005G110300 Populus trichocarpa HOM05D006555 ORTHO05D008376 2.2e-07 59.3 81 35.8
CBR_g8910 Chara braunii HOM05D006555 ORTHO05D008376 2.8e-07 58.9 78 35.9
FvH4_6g49950 Fragaria vesca HOM05D006555 ORTHO05D008376 2.8e-07 58.9 81 35.8
FAN02G0929 Fragaria x ananassa HOM05D006555 ORTHO05D008376 2.8e-07 58.9 81 35.8
FAN05G5565 Fragaria x ananassa HOM05D006555 ORTHO05D008376 2.8e-07 58.9 81 35.8
FAN09G1885 Fragaria x ananassa HOM05D006555 ORTHO05D008376 2.8e-07 58.9 81 35.8
FAN14G1052 Fragaria x ananassa HOM05D006555 ORTHO05D008376 2.8e-07 58.9 81 35.8
RcHm_v2.0_Chr2g0170121 Rosa chinensis HOM05D006555 ORTHO05D008376 2.8e-07 58.9 81 35.8
Manes.17G119457 Manihot esculenta HOM05D006555 ORTHO05D008376 6.3e-07 57.8 81 34.6
Haze_26577 Corylus avellana HOM05D006555 ORTHO05D006826 8.2e-07 57.4 78 35.9
Duzib093G0150 Durio zibethinus HOM05D005693 ORTHO05D006826 1.1e-06 57.0 45 60.0
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 1.4e-06 56.6 86 31.4
CDE05G0078 Ceratophyllum demersum HOM05D005693 ORTHO05D006826 5.3e-06 54.7 39 69.2


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