Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0142321 Rosa chinensis HOM05D008135 ORTHO05D010260 5.5e-37 157.1 80 100.0
FAN02G1144 Fragaria x ananassa HOM05D008135 ORTHO05D010260 2.1e-28 128.6 80 83.8
FvH4_6g32890 Fragaria vesca HOM05D008135 ORTHO05D010260 1.0e-27 126.3 80 82.5
FAN05G3342 Fragaria x ananassa HOM05D008135 ORTHO05D010260 5.1e-27 124.0 80 83.8
Prupe.3G053100 Prunus persica HOM05D008135 ORTHO05D010260 5.3e-24 114.0 77 76.6
Cfa003610 Carpinus fangiana HOM05D008135 ORTHO05D010260 5.0e-22 107.5 79 70.9
CiPaw.01G227600 Carya illinoinensis HOM05D008135 ORTHO05D010260 2.5e-21 105.1 78 71.8
Manes.11G029100 Manihot esculenta HOM05D008135 ORTHO05D010260 7.9e-20 100.1 81 66.7
QL05p015599 Quercus lobata HOM05D008135 ORTHO05D010260 1.0e-19 99.8 69 79.7
Phvul.010G142400 Phaseolus vulgaris HOM05D008135 ORTHO05D010260 2.0e-18 95.5 82 64.6
Glyma.07G012900 Glycine max HOM05D008135 ORTHO05D010260 3.3e-18 94.7 82 64.6
QL05p015762 Quercus lobata HOM05D008135 ORTHO05D010260 3.3e-18 94.7 70 74.3
QL05p015735 Quercus lobata HOM05D008135 ORTHO05D010260 4.4e-18 94.4 69 75.4
Duzib235G1506 Durio zibethinus HOM05D008135 ORTHO05D010260 1.3e-17 92.8 81 61.7
arahy.Tifrunner.gnm1.ann1.4P5WGY Arachis hypogaea HOM05D008135 ORTHO05D010260 2.2e-17 92.0 82 70.7
Potri.001G194100 Populus trichocarpa HOM05D008135 ORTHO05D010260 2.2e-17 92.0 78 62.8
Thecc.06G106900 Theobroma cacao HOM05D008135 ORTHO05D010260 2.2e-17 92.0 78 60.3
Gohir.D05G135300 Gossypium hirsutum HOM05D008135 ORTHO05D010260 2.8e-17 91.7 78 62.8
Gohir.A05G133400 Gossypium hirsutum HOM05D008135 ORTHO05D010260 3.7e-17 91.3 78 62.8
Glyma.08G196600 Glycine max HOM05D008135 ORTHO05D010260 4.8e-17 90.9 83 63.9
Gorai.009G139100 Gossypium raimondii HOM05D008135 ORTHO05D010260 6.3e-17 90.5 78 62.8
arahy.Tifrunner.gnm1.ann1.7STU2J Arachis hypogaea HOM05D008135 ORTHO05D010260 1.1e-16 89.7 82 69.5
Manes.04G137100 Manihot esculenta HOM05D008135 ORTHO05D010260 1.4e-16 89.4 81 63.0
COL.COLO4_30598 Corchorus olitorius HOM05D008135 ORTHO05D010260 1.8e-16 89.0 85 60.0
CSS0040576 Camellia sinensis var. sinensis HOM05D008135 ORTHO05D010260 5.3e-16 87.4 79 60.8
Psat4g194640 Pisum sativum HOM05D008135 ORTHO05D010260 5.3e-16 87.4 82 62.2
Cpa.g.sc131.24 Carica papaya HOM05D008135 ORTHO05D010260 1.2e-15 86.3 83 59.0
Atru.chr1.3625 Acer truncatum HOM05D008135 ORTHO05D010260 3.5e-15 84.7 83 55.4
Lj3g0018742 Lotus japonicus HOM05D008135 ORTHO05D010260 3.5e-15 84.7 80 62.5
TAR383G0415 Trochodendron aralioides HOM05D008135 ORTHO05D010260 4.5e-15 84.3 74 60.8
CsaV3_7G034940 Cucumis sativus L. HOM05D008135 ORTHO05D010260 1.0e-14 83.2 82 57.3
Medtr8g015560 Medicago truncatula HOM05D008135 ORTHO05D010260 1.0e-14 83.2 79 60.8
Gohir.A10G062350 Gossypium hirsutum HOM05D008135 ORTHO05D010260 1.3e-14 82.8 80 57.5
Nitab4.5_0006071g0080 Nicotiana tabacum HOM05D008135 ORTHO05D010260 1.3e-14 82.8 63 63.5
Gorai.011G068000 Gossypium raimondii HOM05D008135 ORTHO05D010260 1.7e-14 82.4 80 57.5
MELO3C024405.2 Cucumis melo HOM05D008135 ORTHO05D010260 2.2e-14 82.0 82 57.3
Sabra01G0135100 Salix brachista HOM05D008135 ORTHO05D010260 2.2e-14 82.0 71 63.4
Rhsim08G0230800 Rhododendron simsii HOM05D008135 ORTHO05D010260 2.9e-14 81.6 59 69.5
Gohir.D10G064050 Gossypium hirsutum HOM05D008135 ORTHO05D010260 5.0e-14 80.9 80 56.2
Actinidia32128 Actinidia chinensis HOM05D008135 ORTHO05D010260 6.5e-14 80.5 81 58.0
ClCG09G000520 Citrullus lanatus HOM05D008135 ORTHO05D010260 6.5e-14 80.5 82 56.1
ECA232G1244 Erigeron canadensis HOM05D008135 ORTHO05D010260 1.5e-13 79.3 54 70.4
Lalb_Chr25g0280561 Lupinus albus HOM05D008135 ORTHO05D010260 1.5e-13 79.3 80 58.8
Solyc03g121340.1 Solanum lycopersicum HOM05D008135 ORTHO05D010260 1.5e-13 79.3 64 60.9
vmacro18825 Vaccinium macrocarpon HOM05D008135 ORTHO05D010260 1.5e-13 79.3 57 70.2
Peaxi162Scf00038g01219 Petunia axillaris HOM05D008135 ORTHO05D010260 3.2e-13 78.2 64 60.9
Sopen03g040150 Solanum pennellii HOM05D008135 ORTHO05D010260 7.2e-13 77.0 64 59.4
Sed0004354 Sechium edule HOM05D008135 ORTHO05D010260 9.4e-13 76.6 84 56.0
Oeu052813.1 Olea europaea HOM05D008135 ORTHO05D010260 1.6e-12 75.9 57 63.2
TAR624G1313 Trochodendron aralioides HOM05D008135 ORTHO05D010260 2.7e-12 75.1 70 55.7
DCAR_026371 Daucus carota HOM05D008135 ORTHO05D010260 3.6e-12 74.7 58 65.5
Migut.I00998 Erythranthe guttata HOM05D008135 ORTHO05D010260 3.6e-12 74.7 51 70.6
MSTRG.11003 Avicennia marina HOM05D008135 ORTHO05D010260 4.7e-12 74.3 57 64.9
Dinv30405 Davidia involucrata HOM05D008135 ORTHO05D010260 1.0e-11 73.2 50 72.0
THA.LOC109116552 Tarenaya hassleriana HOM05D008135 ORTHO05D010260 1.1e-10 69.7 52 63.5
Nitab4.5_0004848g0120 Nicotiana tabacum HOM05D008135 ORTHO05D010260 2.6e-10 68.6 55 60.0
DCAR_007606 Daucus carota HOM05D008135 ORTHO05D010260 3.3e-10 68.2 51 66.7
unitig_88.g27599 Utricularia gibba HOM05D008135 ORTHO05D010260 3.3e-10 68.2 57 61.4
Eucgr.J02889 Eucalyptus grandis HOM05D008135 ORTHO05D010260 4.4e-10 67.8 62 58.1
Actinidia21739 Actinidia chinensis HOM05D008135 ORTHO05D010260 1.3e-09 66.2 72 52.8
MBI01_g16574_MAGBIO Magnolia biondii HOM05D008135 ORTHO05D010260 1.8e-08 62.4 61 55.7
Os01g0558700 Oryza sativa ssp. japonica HOM05D008135 ORTHO05D010260 1.8e-08 62.4 71 52.1
Aqoxy2G03851 Aquilegia oxysepala HOM05D008135 ORTHO05D010260 4.1e-08 61.2 65 50.8
C03p51630 Brassica napus HOM05D011376 ORTHO05D013452 1.6e-07 59.3 65 55.4
BcaC01g03511 Brassica carinata HOM05D011376 ORTHO05D013452 2.0e-07 58.9 65 55.4
BolC3t17446H Brassica oleracea HOM05D011376 ORTHO05D013452 2.0e-07 58.9 65 55.4
BcaB06g26220 Brassica carinata HOM05D011376 ORTHO05D013452 1.7e-06 55.8 53 60.4
Carub.0003s2132 Capsella rubella HOM05D011376 ORTHO05D013452 2.2e-06 55.5 78 52.6
Nn8g38941 Nelumbo nucifera HOM05D008135 ORTHO05D010260 2.2e-06 55.5 67 47.8
HPP92_005009 Vanilla planifolia HOM05D037031 ORTHO05D010260 2.9e-06 55.1 49 49.0
A05p27310 Brassica napus HOM05D011376 ORTHO05D013452 3.8e-06 54.7 82 48.8
BraA05t21623Z Brassica rapa HOM05D011376 ORTHO05D013452 3.8e-06 54.7 82 48.8


User provided reference genes

Program Settings