Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0140811 Rosa chinensis HOM05D008208 ORTHO05D010143 1.1e-282 976.1 539 100.0
Prupe.3G057400 Prunus persica HOM05D008208 ORTHO05D010143 7.8e-87 325.5 583 43.9
MD09G1201700 Malus domestica HOM05D008208 ORTHO05D010143 6.6e-86 322.4 551 45.6
MD17G1181700 Malus domestica HOM05D008208 ORTHO05D010143 8.1e-84 315.5 552 47.1
MD09G1201800 Malus domestica HOM05D008208 ORTHO05D010143 2.4e-83 313.9 543 45.1
QL05p019674 Quercus lobata HOM05D008208 ORTHO05D010143 3.3e-53 213.8 592 34.0
CiPaw.02G145300 Carya illinoinensis HOM05D008208 ORTHO05D010143 2.9e-49 200.7 497 35.2
TAR639G0001 Trochodendron aralioides HOM05D008208 ORTHO05D010143 1.5e-29 135.2 456 30.3
TAR624G0194 Trochodendron aralioides HOM05D008208 ORTHO05D010143 2.0e-26 124.8 317 34.7
TAR626G1368 Trochodendron aralioides HOM05D008208 ORTHO05D010143 1.2e-23 115.5 568 26.9
Dinv30428 Davidia involucrata HOM05D008208 ORTHO05D010143 3.4e-21 107.5 443 32.5
Ciclev10025127m.g Citrus clementina HOM05D008208 ORTHO05D010143 4.4e-21 107.1 413 30.8
Manes.11G032600 Manihot esculenta HOM05D008208 ORTHO05D010143 7.5e-21 106.3 462 29.2
Actinidia39131 Actinidia chinensis HOM05D008208 ORTHO05D010143 1.3e-17 95.5 244 36.5
vmacro17009 Vaccinium macrocarpon HOM05D008208 ORTHO05D010143 1.7e-17 95.1 143 47.6
Actinidia09010 Actinidia chinensis HOM05D008208 ORTHO05D010143 3.2e-16 90.9 549 28.6
GSVIVG01016967001 Vitis vinifera HOM05D000585 ORTHO05D001841 9.4e-16 89.4 561 26.0
CSS0036998 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 1.5e-13 82.0 407 25.3
MELO3C013005.2 Cucumis melo HOM05D026900 ORTHO05D010143 2.6e-13 81.3 568 26.9
CANSAT56G0900 Cannabis sativa HOM05D008208 ORTHO05D010143 9.8e-13 79.3 300 30.0
TWI18G0382 Tripterygium wilfordii HOM05D008208 ORTHO05D010143 1.3e-12 79.0 584 27.1
Sed0025504 Sechium edule HOM05D026900 ORTHO05D010143 4.9e-12 77.0 599 24.9
Nn6g35343 Nelumbo nucifera HOM05D008208 ORTHO05D010143 6.3e-12 76.6 285 30.2
CSS0033280 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 1.4e-11 75.5 405 24.7
PSO210G1301 Papaver somniferum HOM05D029104 ORTHO05D010143 1.8e-11 75.1 243 30.9
Lj9A514T51 Lonicera japonica HOM05D008208 ORTHO05D010143 7.0e-11 73.2 440 29.3
MBI04_g07011_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 7.0e-11 73.2 268 32.8
ClCG07G013360 Citrullus lanatus HOM05D026900 ORTHO05D010143 2.7e-10 71.2 586 27.0
Thecc.06G101100 Theobroma cacao HOM05D008208 ORTHO05D010143 2.7e-10 71.2 597 24.0
Eucgr.F03082 Eucalyptus grandis HOM05D008208 ORTHO05D010143 4.5e-10 70.5 388 25.5
Cc04_g02470 Coffea canephora HOM05D008208 ORTHO05D010143 7.7e-10 69.7 239 30.5
Peaxi162Scf00038g01129 Petunia axillaris HOM05D008208 ORTHO05D010143 1.7e-09 68.6 447 26.2
Nn8g39048 Nelumbo nucifera HOM05D008208 ORTHO05D010143 2.9e-09 67.8 495 23.4
PSO210G2837 Papaver somniferum HOM05D029104 ORTHO05D010143 2.9e-09 67.8 242 28.9
Gohir.A10G065000 Gossypium hirsutum HOM05D008208 ORTHO05D010143 3.8e-09 67.4 562 27.2
CsaV3_3G023500 Cucumis sativus L. HOM05D026900 ORTHO05D010143 1.5e-08 65.5 469 25.4
Oeu002526.1 Olea europaea HOM05D008208 ORTHO05D010143 1.5e-08 65.5 279 31.9
PGSC0003DMG400002607 Solanum tuberosum HOM05D008208 ORTHO05D010143 4.7e-07 60.5 547 27.8
Gohir.D10G066500 Gossypium hirsutum HOM05D008208 ORTHO05D010143 6.1e-07 60.1 454 26.4
Atru.chr1.3545 Acer truncatum HOM05D008208 ORTHO05D010143 8.0e-07 59.7 193 32.6
Sopen03g039910 Solanum pennellii HOM05D008208 ORTHO05D010143 1.0e-06 59.3 546 27.1


User provided reference genes

Program Settings