Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0140071 Rosa chinensis HOM05D008072 ORTHO05D010204 4.9e-76 287.7 146 100.0
FvH4_6g32180 Fragaria vesca HOM05D008072 ORTHO05D010204 3.3e-40 168.7 113 78.8
FAN09G3706 Fragaria x ananassa HOM05D008072 ORTHO05D010204 2.8e-39 165.6 113 77.0
FAN02G2294 Fragaria x ananassa HOM05D008072 ORTHO05D010204 3.7e-39 165.2 113 77.0
FAN05G4246 Fragaria x ananassa HOM05D008072 ORTHO05D010204 3.7e-39 165.2 113 77.0
FAN14G4057 Fragaria x ananassa HOM05D008072 ORTHO05D010204 2.4e-38 162.5 114 77.2
Prupe.3G061100 Prunus persica HOM05D008072 ORTHO05D010204 6.5e-28 127.9 113 61.1
MD17G1186400 Malus domestica HOM05D008072 ORTHO05D010204 4.2e-27 125.2 115 60.9
Dinv37992 Davidia involucrata HOM05D008072 ORTHO05D010204 1.5e-24 116.7 112 58.9
Potri.001G188400 Populus trichocarpa HOM05D008072 ORTHO05D010204 1.8e-22 109.8 114 51.8
Actinidia09003 Actinidia chinensis HOM05D008072 ORTHO05D010204 2.6e-21 105.9 114 52.6
Sabra01G0152600 Salix brachista HOM05D008072 ORTHO05D010204 1.7e-20 103.2 132 47.7
TAR626G1017 Trochodendron aralioides HOM05D008072 ORTHO05D010204 2.2e-20 102.8 113 50.4
Oeu060494.1 Olea europaea HOM05D008072 ORTHO05D010204 2.9e-20 102.4 112 47.3
QL05p020523 Quercus lobata HOM05D008072 ORTHO05D010204 3.2e-19 99.0 112 50.9
Rhsim12G0202400 Rhododendron simsii HOM05D008072 ORTHO05D010204 9.4e-19 97.4 112 48.2
GSVIVG01017012001 Vitis vinifera HOM05D008072 ORTHO05D010204 1.6e-18 96.7 112 47.3
PGR102G0255 Punica granatum HOM05D008072 ORTHO05D010204 2.7e-18 95.9 119 47.1
MD09G1205700 Malus domestica HOM05D008072 ORTHO05D010204 4.7e-18 95.1 114 51.8
Cc04_g02690 Coffea canephora HOM05D008072 ORTHO05D010204 8.0e-18 94.4 116 44.0
Thecc.06G097600 Theobroma cacao HOM05D008072 ORTHO05D010204 1.4e-17 93.6 116 49.1
Aqoxy7G01464 Aquilegia oxysepala HOM05D008072 ORTHO05D010204 5.2e-17 91.7 113 44.2
Hma1.2p1_3269F.1_g334750 Hydrangea macrophylla HOM05D008072 ORTHO05D010204 5.2e-17 91.7 114 49.1
Peaxi162Scf00038g00843 Petunia axillaris HOM05D008072 ORTHO05D010204 5.2e-17 91.7 114 49.1
Duzib192G0771 Durio zibethinus HOM05D008072 ORTHO05D010204 8.8e-17 90.9 123 48.0
Atru.chr1.3499 Acer truncatum HOM05D008072 ORTHO05D010204 1.5e-16 90.1 124 47.6
Gorai.003G063000 Gossypium raimondii HOM05D008072 ORTHO05D010204 1.5e-16 90.1 101 50.5
Gohir.D03G059100 Gossypium hirsutum HOM05D008072 ORTHO05D010204 2.0e-16 89.7 101 50.5
CSS0040470 Camellia sinensis var. sinensis HOM05D008072 ORTHO05D010204 9.7e-16 87.4 117 48.7
Gohir.A02G118500 Gossypium hirsutum HOM05D008072 ORTHO05D010204 1.3e-15 87.0 101 49.5
Manes.04G132700 Manihot esculenta HOM05D008072 ORTHO05D010204 1.7e-15 86.7 114 48.2
PGSC0003DMG400002533 Solanum tuberosum HOM05D008072 ORTHO05D010204 6.3e-15 84.7 114 48.2
Ciclev10026797m.g Citrus clementina HOM05D008072 ORTHO05D010204 1.1e-14 84.0 113 44.2
TPR.G35014 Trifolium pratense HOM05D008072 ORTHO05D010204 1.4e-14 83.6 117 48.7
Lj3g0001751 Lotus japonicus HOM05D008072 ORTHO05D010204 1.8e-14 83.2 115 50.4
Sopen03g039710 Solanum pennellii HOM05D008072 ORTHO05D010204 2.4e-14 82.8 113 47.8
Nn2g11609 Nelumbo nucifera HOM05D008072 ORTHO05D010204 4.1e-14 82.0 114 44.7
MSTRG.9481 Avicennia marina HOM05D008072 ORTHO05D010204 9.1e-14 80.9 117 44.4
Psat4g197480 Pisum sativum HOM05D008072 ORTHO05D010204 9.1e-14 80.9 115 46.1
Haze_15831 Corylus avellana HOM05D008072 ORTHO05D010204 1.6e-13 80.1 159 34.6
VMungo0331G2041 Vigna mungo HOM05D008072 ORTHO05D010204 3.5e-13 79.0 117 48.7
Cpa.g.c31416 Carica papaya HOM05D008072 ORTHO05D010204 5.9e-13 78.2 115 41.7
SalBow7G3462 Salvia bowleyana HOM05D008072 ORTHO05D010204 1.0e-12 77.4 116 44.0
TWI18G1284 Tripterygium wilfordii HOM05D008072 ORTHO05D010204 1.0e-12 77.4 119 47.9
Lalb_Chr04g0262911 Lupinus albus HOM05D008072 ORTHO05D010204 1.7e-12 76.6 113 44.2
Solyc03g120880.4 Solanum lycopersicum HOM05D004877 ORTHO05D005942 2.9e-12 75.9 109 45.0
Phvul.010G146400 Phaseolus vulgaris HOM05D008072 ORTHO05D010204 8.5e-12 74.3 114 46.5
Glyma.07G016900 Glycine max HOM05D008072 ORTHO05D010204 1.1e-11 73.9 114 46.5
HanXRQChr16g0501221 Helianthus annuus HOM05D008072 ORTHO05D010204 1.1e-11 73.9 114 38.6
Glyma.08G202200 Glycine max HOM05D008072 ORTHO05D010204 2.5e-11 72.8 117 43.6
Cfa003662 Carpinus fangiana HOM05D008072 ORTHO05D010204 3.2e-11 72.4 93 49.5
AUR62031887 Chenopodium quinoa HOM05D008072 ORTHO05D010204 3.2e-11 72.4 112 42.0
Medtr8g013930 Medicago truncatula HOM05D008072 ORTHO05D010204 4.2e-11 72.0 115 43.5
CANSAT56G4142 Cannabis sativa HOM05D008072 ORTHO05D010204 2.1e-10 69.7 117 41.9
Sc10g0007210 Simmondsia chinensis HOM05D008072 ORTHO05D010204 3.6e-10 68.9 114 41.2
arahy.Tifrunner.gnm1.ann1.UX9EW1 Arachis hypogaea HOM05D008072 ORTHO05D010204 4.7e-10 68.6 112 42.9
Nn8g39117 Nelumbo nucifera HOM05D008072 ORTHO05D010204 6.1e-10 68.2 113 39.8
EL10Ac9g22100 Beta vulgaris HOM05D008072 ORTHO05D010204 1.4e-09 67.0 118 39.8
ClCG09G000070 Citrullus lanatus HOM05D008072 ORTHO05D010204 1.4e-09 67.0 121 42.1
Sed0011388 Sechium edule HOM05D008072 ORTHO05D010204 1.4e-09 67.0 113 39.8
arahy.Tifrunner.gnm1.ann1.XD1M86 Arachis hypogaea HOM05D008072 ORTHO05D010204 3.0e-09 65.9 113 44.2
CsaV3_7G035400 Cucumis sativus L. HOM05D008072 ORTHO05D010204 4.0e-09 65.5 119 41.2
MBI01_g42894_MAGBIO Magnolia biondii HOM05D008072 ORTHO05D010204 5.2e-09 65.1 116 41.4
SGA_v2.0_scaffold4G02017 Striga asiatica HOM05D008072 ORTHO05D010204 1.2e-08 63.9 122 36.9
CiPaw.02G146800 Carya illinoinensis HOM05D008072 ORTHO05D010204 1.5e-08 63.5 105 41.0
Hund06655 Selenicereus undatus HOM05D008072 ORTHO05D010204 1.5e-08 63.5 108 40.7
Hund31378 Selenicereus undatus HOM05D008072 ORTHO05D010204 2.6e-08 62.8 108 40.7
Nitab4.5_0001755g0100 Nicotiana tabacum HOM05D008072 ORTHO05D010204 4.4e-08 62.0 50 62.0
ECA232G1650 Erigeron canadensis HOM05D004877 ORTHO05D005942 5.7e-08 61.6 101 39.6
Lsat_1_v5_gn_4_99940 Lactuca sativa HOM05D008072 ORTHO05D010204 1.3e-07 60.5 105 35.2
MELO3C024449.2 Cucumis melo HOM05D008072 ORTHO05D010204 6.3e-07 58.2 116 37.1


User provided reference genes

Program Settings