Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0140021 Rosa chinensis HOM05D000454 ORTHO05D002637 1.2e-40 169.9 120 100.0
FvH4_6g32123 Fragaria vesca HOM05D000454 ORTHO05D002637 3.0e-31 138.7 128 74.2
FAN14G2323 Fragaria x ananassa HOM05D000454 ORTHO05D002637 3.0e-31 138.7 128 74.2
RcHm_v2.0_Chr2g0140001 Rosa chinensis HOM05D000454 ORTHO05D002637 9.7e-30 133.7 120 59.2
FvH4_6g32122 Fragaria vesca HOM05D000454 ORTHO05D002637 2.2e-26 122.5 120 58.3
RcHm_v2.0_Chr2g0139991 Rosa chinensis HOM05D000454 ORTHO05D002637 6.1e-24 114.4 120 55.0
RcHm_v2.0_Chr6g0309561 Rosa chinensis HOM05D000454 ORTHO05D002637 2.0e-22 109.4 58 86.2
Prupe.3G061800 Prunus persica HOM05D000454 ORTHO05D002637 1.3e-18 96.7 60 73.3
Prupe.3G062200 Prunus persica HOM05D000454 ORTHO05D002637 1.6e-16 89.7 60 68.3
FAN05G3697 Fragaria x ananassa HOM05D000454 ORTHO05D002637 4.7e-16 88.2 60 71.7
Dinv37996 Davidia involucrata HOM05D000454 ORTHO05D002637 3.7e-13 78.6 60 56.7
Hma1.2p1_0659F.1_g197390 Hydrangea macrophylla HOM05D000454 ORTHO05D002637 3.1e-12 75.5 63 55.6
GSVIVG01017031001 Vitis vinifera HOM05D000454 ORTHO05D002637 4.1e-12 75.1 60 58.3
TWI12G0592 Tripterygium wilfordii HOM05D000454 ORTHO05D002637 2.7e-11 72.4 120 37.5
CiPaw.02G147100 Carya illinoinensis HOM05D000454 ORTHO05D002637 3.5e-11 72.0 59 54.2
Ciclev10027021m.g Citrus clementina HOM05D000454 ORTHO05D002637 3.5e-11 72.0 60 58.3
Hma1.2p1_1056F.1_g252690 Hydrangea macrophylla HOM05D000454 ORTHO05D002637 2.9e-10 68.9 63 49.2
QL05p020666 Quercus lobata HOM05D000454 ORTHO05D002637 2.9e-10 68.9 59 50.8
QL05p020685 Quercus lobata HOM05D000454 ORTHO05D002637 2.9e-10 68.9 59 50.8
HanXRQChr09g0275911 Helianthus annuus HOM05D000454 ORTHO05D002637 3.8e-10 68.6 62 53.2
Potri.001G187600 Populus trichocarpa HOM05D000454 ORTHO05D002637 5.0e-10 68.2 60 55.0
CiPaw.01G233200 Carya illinoinensis HOM05D000454 ORTHO05D002637 6.6e-10 67.8 63 46.0
CiPaw.01G233300 Carya illinoinensis HOM05D000454 ORTHO05D002637 6.6e-10 67.8 60 48.3
HanXRQChr09g0275901 Helianthus annuus HOM05D000454 ORTHO05D002637 8.6e-10 67.4 61 50.8
Haze_07930 Corylus avellana HOM05D000454 ORTHO05D002637 1.1e-09 67.0 59 47.5
COL.COLO4_30480 Corchorus olitorius HOM05D000454 ORTHO05D002637 2.5e-09 65.9 119 31.1
QL05p020655 Quercus lobata HOM05D000454 ORTHO05D002637 5.5e-09 64.7 64 48.4
Nn3g18151 Nelumbo nucifera HOM05D000454 ORTHO05D002637 7.2e-09 64.3 60 51.7
Lsat_1_v5_gn_4_101061 Lactuca sativa HOM05D000454 ORTHO05D002637 9.5e-09 63.9 61 47.5
PGR102G3036 Punica granatum HOM05D000454 ORTHO05D002637 9.5e-09 63.9 63 44.4
Sabra18G0042900 Salix brachista HOM05D000454 ORTHO05D002637 1.2e-08 63.5 63 39.7
Cfa012703 Carpinus fangiana HOM05D000454 ORTHO05D002637 1.6e-08 63.2 59 45.8
Manes.04G132202 Manihot esculenta HOM05D000454 ORTHO05D002637 1.6e-08 63.2 120 32.5
COL.COLO4_30483 Corchorus olitorius HOM05D000454 ORTHO05D002637 2.8e-08 62.4 60 43.3
Potri.018G042200 Populus trichocarpa HOM05D000454 ORTHO05D002637 3.6e-08 62.0 63 41.3
Prupe.3G062400 Prunus persica HOM05D000454 ORTHO05D002637 3.6e-08 62.0 120 33.3
QL05p020689 Quercus lobata HOM05D000454 ORTHO05D002637 3.6e-08 62.0 60 46.7
QL05p020802 Quercus lobata HOM05D000454 ORTHO05D002637 3.6e-08 62.0 60 48.3
Manes.16G072800 Manihot esculenta HOM05D000454 ORTHO05D002637 4.7e-08 61.6 66 45.5
QL05p020680 Quercus lobata HOM05D000454 ORTHO05D002637 6.1e-08 61.2 64 45.3
Actinidia39143 Actinidia chinensis HOM05D000454 ORTHO05D002637 8.0e-08 60.8 63 44.4
Ciclev10025077m.g Citrus clementina HOM05D000454 ORTHO05D002637 1.0e-07 60.5 121 34.7
MD17G1186800 Malus domestica HOM05D000454 ORTHO05D002637 1.0e-07 60.5 59 49.2
TAR383G0435 Trochodendron aralioides HOM05D000454 ORTHO05D002637 1.4e-07 60.1 63 44.4
COL.COLO4_30481 Corchorus olitorius HOM05D000454 ORTHO05D002637 1.8e-07 59.7 63 44.4
CsaV3_7G033580 Cucumis sativus L. HOM05D000454 ORTHO05D002637 2.3e-07 59.3 64 45.3
Nn3g18158 Nelumbo nucifera HOM05D000454 ORTHO05D002637 2.3e-07 59.3 65 49.2
Prupe.3G061900 Prunus persica HOM05D000454 ORTHO05D002637 2.3e-07 59.3 59 45.8
Prupe.3G062300 Prunus persica HOM05D000454 ORTHO05D002637 2.3e-07 59.3 63 46.0
QL05p020771 Quercus lobata HOM05D000454 ORTHO05D002637 2.3e-07 59.3 60 46.7
Thecc.06G097100 Theobroma cacao HOM05D000454 ORTHO05D002637 3.0e-07 58.9 120 32.5
Haze_07928 Corylus avellana HOM05D000454 ORTHO05D002637 4.0e-07 58.5 62 46.8
Medtr2g101320 Medicago truncatula HOM05D000454 ORTHO05D002637 4.0e-07 58.5 60 41.7
QL05p020728 Quercus lobata HOM05D000454 ORTHO05D002637 4.0e-07 58.5 64 46.9
QL93p0247_0007 Quercus lobata HOM05D000454 ORTHO05D002637 4.0e-07 58.5 64 46.9
MD17G1187000 Malus domestica HOM05D000454 ORTHO05D002637 5.2e-07 58.2 63 46.0
Manes.04G132102 Manihot esculenta HOM05D000454 ORTHO05D002637 5.2e-07 58.2 60 41.7
Prupe.3G065300 Prunus persica HOM05D000454 ORTHO05D002637 5.2e-07 58.2 63 46.0
ClCG07G013260 Citrullus lanatus HOM05D000454 ORTHO05D002637 6.8e-07 57.8 60 41.7
RcHm_v2.0_Chr2g0139911 Rosa chinensis HOM05D000454 ORTHO05D002637 6.8e-07 57.8 59 45.8
MELO3C024269.2 Cucumis melo HOM05D000454 ORTHO05D002637 8.9e-07 57.4 64 43.8
Duzib168G0801 Durio zibethinus HOM05D000454 ORTHO05D002637 8.9e-07 57.4 63 46.0
Lj3g0015079 Lotus japonicus HOM05D000454 ORTHO05D002637 8.9e-07 57.4 59 44.1
Phvul.005G167300 Phaseolus vulgaris HOM05D000454 ORTHO05D002637 8.9e-07 57.4 59 44.1
arahy.Tifrunner.gnm1.ann1.VK618R Arachis hypogaea HOM05D000454 ORTHO05D002637 1.2e-06 57.0 59 42.4
arahy.Tifrunner.gnm1.ann1.2M4JN6 Arachis hypogaea HOM05D000454 ORTHO05D002637 2.0e-06 56.2 59 40.7
Thecc.09G043600 Theobroma cacao HOM05D000454 ORTHO05D002637 2.0e-06 56.2 63 44.4
Cfa003673 Carpinus fangiana HOM05D000454 ORTHO05D002637 2.6e-06 55.8 60 41.7
FAN09G2279 Fragaria x ananassa HOM05D000454 ORTHO05D002637 2.6e-06 55.8 59 42.4
Cfa012706 Carpinus fangiana HOM05D000454 ORTHO05D002637 3.4e-06 55.5 62 45.2
Lsat_1_v5_gn_4_101080 Lactuca sativa HOM05D000454 ORTHO05D002637 3.4e-06 55.5 64 40.6
THA.LOC104799197 Tarenaya hassleriana HOM05D000454 ORTHO05D002637 3.4e-06 55.5 62 41.9
Lsat_1_v5_gn_4_99840 Lactuca sativa HOM05D000454 ORTHO05D002637 4.4e-06 55.1 55 45.5
Thecc.06G096900 Theobroma cacao HOM05D000454 ORTHO05D002637 4.4e-06 55.1 118 28.8
Dinv30454 Davidia involucrata HOM05D000454 ORTHO05D002637 5.7e-06 54.7 55 41.8
MBI18_g43125_MAGBIO Magnolia biondii HOM05D000454 ORTHO05D002637 7.5e-06 54.3 122 32.8


User provided reference genes

Program Settings