Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0138871 Rosa chinensis HOM05D006679 ORTHO05D008461 1.9e-74 282.3 135 100.0
RcHm_v2.0_Chr6g0307941 Rosa chinensis HOM05D006679 ORTHO05D008461 7.3e-58 227.3 134 82.1
FAN27G1719 Fragaria x ananassa HOM05D006679 ORTHO05D008461 1.6e-57 226.1 134 78.4
FvH4_2g34430 Fragaria vesca HOM05D006679 ORTHO05D008461 6.2e-57 224.2 134 77.6
FAN15G2074 Fragaria x ananassa HOM05D006679 ORTHO05D008461 1.4e-56 223.0 134 77.6
FAN20G3165 Fragaria x ananassa HOM05D006679 ORTHO05D008461 2.3e-56 222.2 134 76.9
FAN24G0165 Fragaria x ananassa HOM05D006679 ORTHO05D008461 1.6e-36 156.4 97 75.3
GSVIVG01009494001 Vitis vinifera HOM05D006679 ORTHO05D008461 1.0e-27 127.1 144 50.0
Prupe.1G435400 Prunus persica HOM05D006679 ORTHO05D008461 6.6e-27 124.4 138 49.3
Haze_17524 Corylus avellana HOM05D006679 ORTHO05D008461 1.9e-26 122.9 138 52.2
Cfa018555 Carpinus fangiana HOM05D006679 ORTHO05D008461 4.3e-26 121.7 138 52.2
Gohir.D05G205500 Gossypium hirsutum HOM05D006679 ORTHO05D008461 2.8e-25 119.0 145 50.3
Cpa.g.sc49.20 Carica papaya HOM05D006679 ORTHO05D008461 3.6e-25 118.6 149 50.3
Duzib041G0515 Durio zibethinus HOM05D006679 ORTHO05D008461 4.8e-25 118.2 143 49.7
MD08G1101500 Malus domestica HOM05D006679 ORTHO05D008461 4.8e-25 118.2 137 51.8
Gohir.A05G202400 Gossypium hirsutum HOM05D006679 ORTHO05D008461 6.2e-25 117.9 145 49.7
Gorai.009G211800 Gossypium raimondii HOM05D006679 ORTHO05D008461 8.1e-25 117.5 145 49.7
Potri.014G029200 Populus trichocarpa HOM05D006679 ORTHO05D008461 1.8e-24 116.3 147 49.0
MD15G1082700 Malus domestica HOM05D006679 ORTHO05D008461 4.0e-24 115.2 140 48.6
QL02p004799 Quercus lobata HOM05D006679 ORTHO05D008461 1.5e-23 113.2 138 50.0
TAR376G0298 Trochodendron aralioides HOM05D006679 ORTHO05D008461 2.2e-22 109.4 147 47.6
THA.LOC104803677 Tarenaya hassleriana HOM05D006679 ORTHO05D008461 2.9e-22 109.0 116 53.4
CANSAT25G3852 Cannabis sativa HOM05D006679 ORTHO05D008461 3.8e-22 108.6 83 67.5
COL.COLO4_26510 Corchorus olitorius HOM05D006679 ORTHO05D008461 3.8e-22 108.6 95 62.1
Atru.chr13.694 Acer truncatum HOM05D006679 ORTHO05D008461 1.1e-21 107.1 147 49.7
Hma1.2p1_0982F.1_g244020 Hydrangea macrophylla HOM05D006679 ORTHO05D008461 1.4e-21 106.7 139 45.3
MELO3C010860.2 Cucumis melo HOM05D006679 ORTHO05D008461 2.4e-21 105.9 137 45.3
Thecc.08G007200 Theobroma cacao HOM05D006679 ORTHO05D008461 9.3e-21 104.0 70 74.3
Manes.05G174002 Manihot esculenta HOM05D006679 ORTHO05D008461 4.6e-20 101.7 147 43.5
Dinv39316 Davidia involucrata HOM05D006679 ORTHO05D008461 1.3e-19 100.1 92 54.3
Rhsim06G0049900 Rhododendron simsii HOM05D006679 ORTHO05D008461 1.8e-19 99.8 145 41.4
Ca_15948_v3 Cicer arietinum L. HOM05D006679 ORTHO05D008461 3.9e-19 98.6 145 42.8
Sc15g0006140 Simmondsia chinensis HOM05D006679 ORTHO05D008461 5.1e-19 98.2 138 41.3
Lj4A58T19 Lonicera japonica HOM05D006679 ORTHO05D008461 6.7e-19 97.8 76 65.8
PGR083G0721 Punica granatum HOM05D006679 ORTHO05D008461 6.7e-19 97.8 140 42.1
Ciclev10002686m.g Citrus clementina HOM05D006679 ORTHO05D008461 8.7e-19 97.4 146 43.8
PSO541G1985 Papaver somniferum HOM05D006679 ORTHO05D008461 8.7e-19 97.4 73 65.8
Phvul.009G065200 Phaseolus vulgaris HOM05D006679 ORTHO05D008461 8.7e-19 97.4 111 49.5
Sed0001224 Sechium edule HOM05D006679 ORTHO05D008461 1.1e-18 97.1 135 44.4
Actinidia23275 Actinidia chinensis HOM05D006679 ORTHO05D008461 1.9e-18 96.3 142 43.7
Aqoxy6G01320 Aquilegia oxysepala HOM05D006679 ORTHO05D008461 1.9e-18 96.3 145 42.8
CsaV3_2G027800 Cucumis sativus L. HOM05D006679 ORTHO05D008461 2.5e-18 95.9 73 64.4
PSO675G1564 Papaver somniferum HOM05D006679 ORTHO05D008461 2.5e-18 95.9 75 61.3
TWI56G1133 Tripterygium wilfordii HOM05D006679 ORTHO05D008461 2.5e-18 95.9 150 42.0
Actinidia22629 Actinidia chinensis HOM05D006679 ORTHO05D008461 3.3e-18 95.5 90 55.6
VMungo1309G2322 Vigna mungo HOM05D006679 ORTHO05D008461 4.3e-18 95.1 71 64.8
Glyma.04G038900 Glycine max HOM05D006679 ORTHO05D008461 5.6e-18 94.7 71 66.2
Glyma.06G039900 Glycine max HOM05D006679 ORTHO05D008461 5.6e-18 94.7 71 66.2
Cc10_g04150 Coffea canephora HOM05D006679 ORTHO05D008461 9.6e-18 94.0 93 52.7
Nn1g04857 Nelumbo nucifera HOM05D006679 ORTHO05D008461 9.6e-18 94.0 144 41.7
Sc15g0006210 Simmondsia chinensis HOM05D006679 ORTHO05D008461 1.3e-17 93.6 68 66.2
Eucgr.F00226 Eucalyptus grandis HOM05D006679 ORTHO05D008461 2.1e-17 92.8 139 43.2
Carub.0001s0705 Capsella rubella HOM05D006679 ORTHO05D008461 2.8e-17 92.4 109 48.6
Oeu017172.1 Olea europaea HOM05D006679 ORTHO05D008461 3.6e-17 92.0 68 66.2
CiPaw.16G043700 Carya illinoinensis HOM05D006679 ORTHO05D008461 4.8e-17 91.7 72 59.7
vmacro21521 Vaccinium macrocarpon HOM05D006679 ORTHO05D008461 4.8e-17 91.7 143 40.6
ATR1102G028 Amborella trichopoda HOM05D006679 ORTHO05D008461 6.2e-17 91.3 94 53.2
Psat5g043080 Pisum sativum HOM05D006679 ORTHO05D008461 8.1e-17 90.9 140 42.1
Sabra14G0020000 Salix brachista HOM05D006679 ORTHO05D008461 8.1e-17 90.9 65 67.7
AT1G07700 Arabidopsis thaliana HOM05D006679 ORTHO05D008461 1.4e-16 90.1 77 62.3
AL1G17900 Arabidopsis lyrata HOM05D006679 ORTHO05D008461 2.4e-16 89.4 70 64.3
Nitab4.5_0003118g0010 Nicotiana tabacum HOM05D006679 ORTHO05D008461 2.4e-16 89.4 96 50.0
TPR.G24167 Trifolium pratense HOM05D006679 ORTHO05D008461 2.4e-16 89.4 143 40.6
Nitab4.5_0000287g0350 Nicotiana tabacum HOM05D006679 ORTHO05D008461 3.1e-16 89.0 96 50.0
Aa31LG5G9280 Aethionema arabicum HOM05D006679 ORTHO05D008461 6.9e-16 87.8 76 60.5
CAN.G371.2 Capsicum annuum HOM05D006679 ORTHO05D008461 9.0e-16 87.4 96 49.0
arahy.Tifrunner.gnm1.ann1.WQ97CK Arachis hypogaea HOM05D006679 ORTHO05D008461 1.2e-15 87.0 68 61.8
Ah.11g040620 Amaranthus hybridus HOM05D006679 ORTHO05D008461 1.5e-15 86.7 74 59.5
Lsat_1_v5_gn_4_125640 Lactuca sativa HOM05D006679 ORTHO05D008461 2.0e-15 86.3 114 43.0
DCAR_019453 Daucus carota HOM05D006679 ORTHO05D008461 2.6e-15 85.9 63 66.7
Solyc04g078910.3 Solanum lycopersicum HOM05D006679 ORTHO05D008461 2.6e-15 85.9 105 46.7
CSS0035367 Camellia sinensis var. sinensis HOM05D006679 ORTHO05D008461 3.4e-15 85.5 145 39.3
Peaxi162Scf00252g00067 Petunia axillaris HOM05D006679 ORTHO05D008461 3.4e-15 85.5 65 64.6
unitig_19.g30011 Utricularia gibba HOM05D006679 ORTHO05D008461 3.4e-15 85.5 75 53.3
unitig_8.g5019 Utricularia gibba HOM05D006679 ORTHO05D008461 3.4e-15 85.5 75 53.3
PGSC0003DMG400008013 Solanum tuberosum HOM05D006679 ORTHO05D008461 4.5e-15 85.1 96 47.9
Sp7g22460 Schrenkiella parvula HOM05D006679 ORTHO05D008461 5.8e-15 84.7 137 40.1
Sopen04g032510 Solanum pennellii HOM05D006679 ORTHO05D008461 5.8e-15 84.7 103 46.6
SGA_v2.0_scaffold616G53207 Striga asiatica HOM05D006679 ORTHO05D008461 7.6e-15 84.3 75 56.0
EL10Ac1g02036 Beta vulgaris HOM05D006679 ORTHO05D008461 1.3e-14 83.6 73 61.6
CSS0029638 Camellia sinensis var. sinensis HOM05D006679 ORTHO05D008461 1.3e-14 83.6 145 38.6
CDE04G2190 Ceratophyllum demersum HOM05D006679 ORTHO05D008461 1.3e-14 83.6 80 55.0
Hund01732 Selenicereus undatus HOM05D006679 ORTHO05D008461 2.2e-14 82.8 74 54.1
HanXRQChr14g0439631 Helianthus annuus HOM05D006679 ORTHO05D008461 2.9e-14 82.4 70 60.0
SalBow7G0072 Salvia bowleyana HOM05D006679 ORTHO05D008461 2.9e-14 82.4 70 58.6
CARHR007470 Cardamine hirsuta HOM05D006679 ORTHO05D008461 4.9e-14 81.6 70 58.6
MSTRG.1349 Avicennia marina HOM05D006679 ORTHO05D008461 8.4e-14 80.9 67 61.2
BcaNung05639 Brassica carinata HOM05D006679 ORTHO05D008461 1.1e-13 80.5 72 59.7
ECA232G3126 Erigeron canadensis HOM05D006679 ORTHO05D008461 1.1e-13 80.5 63 63.5
A03p55310 Brassica napus HOM05D006679 ORTHO05D008461 1.9e-13 79.7 71 59.2
BolC7t45852H Brassica oleracea HOM05D006679 ORTHO05D008461 1.9e-13 79.7 71 59.2
BraA03t14590Z Brassica rapa HOM05D006679 ORTHO05D008461 1.9e-13 79.7 71 59.2
HanXRQChr09g0267601 Helianthus annuus HOM05D006679 ORTHO05D008461 1.9e-13 79.7 64 60.9
DCAR_022432 Daucus carota HOM05D006679 ORTHO05D008461 3.2e-13 79.0 64 64.1
Lalb_Chr23g0267181 Lupinus albus HOM05D006679 ORTHO05D008461 3.2e-13 79.0 135 37.0
HPP92_013116 Vanilla planifolia HOM05D006679 ORTHO05D008461 3.2e-13 79.0 62 59.7
Pp3c10_18810 Physcomitrium patens HOM05D006679 ORTHO05D008461 5.5e-13 78.2 83 43.4
Thhalv10026224m.g Eutrema salsugineum HOM05D006679 ORTHO05D008461 7.1e-13 77.8 64 59.4
SEGI_11121 Sequoiadendron giganteum HOM05D006679 ORTHO05D008461 1.2e-12 77.0 67 56.7
arahy.Tifrunner.gnm1.ann1.XE9EJK Arachis hypogaea HOM05D006679 ORTHO05D008461 1.0e-11 73.9 68 52.9
Medtr3g101740 Medicago truncatula HOM05D006679 ORTHO05D008461 3.9e-11 72.0 74 55.4
Pp3c4_3900 Physcomitrium patens HOM05D006679 ORTHO05D008461 3.9e-11 72.0 90 37.8
BcaC06g32882 Brassica carinata HOM05D006679 ORTHO05D008461 6.7e-11 71.2 69 55.1
Lj1g0004984 Lotus japonicus HOM05D006679 ORTHO05D008461 6.7e-11 71.2 79 48.1
AagrBONN_evm.TU.Sc2ySwM_344.4629 Anthoceros agrestis HOM05D006679 ORTHO05D008461 8.7e-11 70.9 54 63.0
Mapoly0014s0177 Marchantia polymorpha HOM05D006679 ORTHO05D008461 3.3e-10 68.9 56 57.1
Migut.C00578 Erythranthe guttata HOM05D006679 ORTHO05D008461 4.3e-10 68.6 56 58.9
AUR62036763 Chenopodium quinoa HOM05D006679 ORTHO05D008461 1.3e-09 67.0 49 65.3
Os02g0567100 Oryza sativa ssp. japonica HOM05D006679 ORTHO05D008461 1.8e-08 63.2 54 55.6
arahy.Tifrunner.gnm1.ann1.Q4KY5Z Arachis hypogaea HOM05D006679 ORTHO05D008461 2.4e-08 62.8 84 41.7
Zm00001eb244540 Zea mays HOM05D006679 ORTHO05D008461 2.4e-08 62.8 58 48.3
AUR62013842 Chenopodium quinoa HOM05D006679 ORTHO05D008461 4.0e-08 62.0 45 64.4
ClCG08G015940 Citrullus lanatus HOM05D006679 ORTHO05D008461 7.6e-07 57.8 102 40.2


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