Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0137281 Rosa chinensis HOM05D004738 ORTHO05D006439 3.3e-275 951.0 462 100.0
FAN05G5687 Fragaria x ananassa HOM05D004738 ORTHO05D006439 5.1e-244 847.4 462 89.6
FAN09G3531 Fragaria x ananassa HOM05D004738 ORTHO05D006439 1.3e-242 842.8 464 89.0
FAN02G1331 Fragaria x ananassa HOM05D004738 ORTHO05D006439 2.0e-240 835.5 462 88.5
FAN14G4632 Fragaria x ananassa HOM05D004738 ORTHO05D006439 3.4e-240 834.7 474 86.9
Prupe.3G075100 Prunus persica HOM05D004738 ORTHO05D006439 3.1e-225 785.0 462 82.0
FvH4_6g30840 Fragaria vesca HOM05D004738 ORTHO05D006439 6.3e-218 760.8 389 92.5
MD17G1198400 Malus domestica HOM05D004738 ORTHO05D006439 3.0e-212 741.9 464 78.4
Haze_16464 Corylus avellana HOM05D004738 ORTHO05D006439 1.7e-207 726.1 484 73.6
Cfa002046 Carpinus fangiana HOM05D004738 ORTHO05D006439 1.0e-204 716.8 461 76.1
CiPaw.02G152800 Carya illinoinensis HOM05D004738 ORTHO05D006439 1.3e-194 683.3 461 72.7
QL05p025470 Quercus lobata HOM05D004738 ORTHO05D006439 3.8e-191 671.8 389 80.5
Ciclev10025569m.g Citrus clementina HOM05D004738 ORTHO05D006439 1.1e-190 670.2 463 71.1
CANSAT56G4214 Cannabis sativa HOM05D004738 ORTHO05D006439 5.2e-188 661.4 460 72.0
Potri.003G058500 Populus trichocarpa HOM05D004738 ORTHO05D006439 1.1e-187 660.2 469 69.9
Duzib235G1168 Durio zibethinus HOM05D004738 ORTHO05D006439 2.6e-187 659.1 452 72.3
Nn2g11846 Nelumbo nucifera HOM05D004738 ORTHO05D006439 2.6e-187 659.1 466 70.4
Thecc.06G081700 Theobroma cacao HOM05D004738 ORTHO05D006439 8.2e-186 654.1 457 70.9
Nn8g39296 Nelumbo nucifera HOM05D004738 ORTHO05D006439 5.3e-185 651.4 464 69.0
Dinv30535 Davidia involucrata HOM05D004738 ORTHO05D006439 2.7e-184 649.0 469 68.7
Eucgr.F02574 Eucalyptus grandis HOM05D004738 ORTHO05D006439 3.5e-184 648.7 394 77.9
Sabra03G0032700 Salix brachista HOM05D004738 ORTHO05D006439 7.7e-184 647.5 464 69.0
TAR383G0518 Trochodendron aralioides HOM05D004738 ORTHO05D006439 2.2e-183 646.0 387 76.5
Rhsim12G0195800 Rhododendron simsii HOM05D004738 ORTHO05D006439 3.2e-182 642.1 465 69.0
Gohir.A02G122900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 5.5e-182 641.3 412 74.8
ECA247G3808 Erigeron canadensis HOM05D004738 ORTHO05D006439 1.2e-181 640.2 409 74.3
Lj3g0008822 Lotus japonicus HOM05D004738 ORTHO05D006439 2.1e-181 639.4 425 72.5
GSVIVG01017163001 Vitis vinifera HOM05D004738 ORTHO05D006439 2.7e-181 639.0 384 78.4
Gorai.002G058000 Gossypium raimondii HOM05D004738 ORTHO05D006439 3.6e-181 638.6 412 74.3
arahy.Tifrunner.gnm1.ann1.2F1L5Z Arachis hypogaea HOM05D004738 ORTHO05D006439 4.7e-181 638.3 421 74.3
Gohir.D03G073500 Gossypium hirsutum HOM05D004738 ORTHO05D006439 1.0e-180 637.1 412 74.3
Actinidia08828 Actinidia chinensis HOM05D004738 ORTHO05D006439 1.4e-180 636.7 461 70.3
VMungo1080G0347 Vigna mungo HOM05D004738 ORTHO05D006439 4.0e-180 635.2 464 68.5
Lsat_1_v5_gn_1_34140 Lactuca sativa HOM05D004738 ORTHO05D006439 8.8e-180 634.0 416 73.3
Medtr2g102510 Medicago truncatula HOM05D004738 ORTHO05D006439 1.2e-179 633.6 459 68.6
vmacro16939 Vaccinium macrocarpon HOM05D004738 ORTHO05D006439 1.2e-179 633.6 463 68.7
CSS0005409 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 1.5e-179 633.3 465 68.8
SGA_v2.0_scaffold37G14802 Striga asiatica HOM05D004738 ORTHO05D006439 3.4e-179 632.1 451 69.2
CsaV3_7G032950 Cucumis sativus L. HOM05D004738 ORTHO05D006439 1.7e-178 629.8 432 69.9
Glyma.15G012500 Glycine max HOM05D004738 ORTHO05D006439 2.2e-178 629.4 460 68.0
TWI12G0818 Tripterygium wilfordii HOM05D004738 ORTHO05D006439 3.7e-178 628.6 429 72.0
Cpa.g.sc10.174 Carica papaya HOM05D004738 ORTHO05D006439 6.3e-178 627.9 351 82.6
HanXRQChr04g0096441 Helianthus annuus HOM05D004738 ORTHO05D006439 8.3e-178 627.5 411 73.5
COL.COLO4_02957 Corchorus olitorius HOM05D004738 ORTHO05D006439 1.4e-177 626.7 363 79.6
Gorai.009G132100 Gossypium raimondii HOM05D004738 ORTHO05D006439 2.4e-177 625.9 445 68.5
Lalb_Chr14g0373571 Lupinus albus HOM05D004738 ORTHO05D006439 3.1e-177 625.5 462 67.1
Phvul.005G173200 Phaseolus vulgaris HOM05D004738 ORTHO05D006439 4.1e-177 625.2 460 67.0
Sed0002572 Sechium edule HOM05D004738 ORTHO05D006439 9.1e-177 624.0 432 68.8
Cc04_g03640 Coffea canephora HOM05D004738 ORTHO05D006439 2.0e-176 622.9 464 65.9
DCAR_026302 Daucus carota HOM05D004738 ORTHO05D006439 2.0e-176 622.9 462 66.7
Glyma.13G361400 Glycine max HOM05D004738 ORTHO05D006439 2.0e-176 622.9 460 67.8
Aqoxy7G03780 Aquilegia oxysepala HOM05D004738 ORTHO05D006439 3.5e-176 622.1 394 74.4
Oeu022417.1 Olea europaea HOM05D004738 ORTHO05D006439 4.5e-176 621.7 467 66.8
MELO3C023371.2 Cucumis melo HOM05D004738 ORTHO05D006439 5.9e-176 621.3 431 69.4
TPR.G37250 Trifolium pratense HOM05D004738 ORTHO05D006439 1.7e-175 619.8 375 75.7
Manes.04G120700 Manihot esculenta HOM05D004738 ORTHO05D006439 2.9e-175 619.0 467 67.0
arahy.Tifrunner.gnm1.ann1.S5ELWT Arachis hypogaea HOM05D004738 ORTHO05D006439 3.8e-175 618.6 390 75.9
Sc12g0009100 Simmondsia chinensis HOM05D004738 ORTHO05D006439 5.0e-175 618.2 377 76.1
Gohir.A05G127000 Gossypium hirsutum HOM05D004738 ORTHO05D006439 8.5e-175 617.5 445 67.6
HanXRQChr02g0032631 Helianthus annuus HOM05D004738 ORTHO05D006439 3.2e-174 615.5 437 69.1
Potri.001G177300 Populus trichocarpa HOM05D004738 ORTHO05D006439 5.5e-174 614.8 404 73.0
Nitab4.5_0005784g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 2.1e-173 612.8 478 65.1
Ca_01103_v3 Cicer arietinum L. HOM05D004738 ORTHO05D006439 2.7e-173 612.5 415 71.1
Peaxi162Scf00015g00234 Petunia axillaris HOM05D004738 ORTHO05D006439 4.7e-173 611.7 377 74.8
Lalb_Chr22g0351141 Lupinus albus HOM05D004738 ORTHO05D006439 6.1e-173 611.3 464 64.9
Thhalv10018540m.g Eutrema salsugineum HOM05D004738 ORTHO05D006439 1.0e-172 610.5 397 72.8
Sopen03g039310 Solanum pennellii HOM05D004738 ORTHO05D006439 1.4e-172 610.1 470 65.1
Migut.I00837 Erythranthe guttata HOM05D004738 ORTHO05D006439 2.3e-172 609.4 378 74.3
Solyc03g120430.3 Solanum lycopersicum HOM05D004738 ORTHO05D006439 2.3e-172 609.4 469 64.4
Sopen00g008920 Solanum pennellii HOM05D004738 ORTHO05D006439 5.2e-172 608.2 469 65.0
MSTRG.11096 Avicennia marina HOM05D004738 ORTHO05D006439 6.8e-172 607.8 446 66.1
THA.LOC104808210 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 6.8e-172 607.8 398 73.4
Sp5g35430 Schrenkiella parvula HOM05D004738 ORTHO05D006439 1.5e-171 606.7 454 66.1
Lj9A505T66 Lonicera japonica HOM05D004738 ORTHO05D006439 2.0e-171 606.3 348 80.5
Lj3g0001201 Lotus japonicus HOM05D004738 ORTHO05D006439 3.4e-171 605.5 447 67.3
Nitab4.5_0002424g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 1.3e-170 603.6 496 62.3
CARHR074130 Cardamine hirsuta HOM05D004738 ORTHO05D006439 3.7e-170 602.1 398 72.1
PGSC0003DMG400002559 Solanum tuberosum HOM05D004738 ORTHO05D006439 1.1e-169 600.5 465 65.4
BraA02t07352Z Brassica rapa HOM05D004738 ORTHO05D006439 1.4e-169 600.1 458 64.6
Carub.0002s2719 Capsella rubella HOM05D004738 ORTHO05D006439 3.1e-169 599.0 411 69.3
A02p23600 Brassica napus HOM05D004738 ORTHO05D006439 7.0e-169 597.8 458 64.4
BolC2t09746H Brassica oleracea HOM05D004738 ORTHO05D006439 7.0e-169 597.8 430 66.7
THA.LOC104812476 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 1.2e-168 597.0 402 70.6
BcaB02g07276 Brassica carinata HOM05D004738 ORTHO05D006439 1.6e-168 596.7 380 71.8
A07p26650 Brassica napus HOM05D004738 ORTHO05D006439 1.6e-168 596.7 397 71.0
AL2G41120 Arabidopsis lyrata HOM05D004738 ORTHO05D006439 2.7e-168 595.9 398 71.1
C02p37360 Brassica napus HOM05D004738 ORTHO05D006439 2.7e-168 595.9 430 66.5
C06p54140 Brassica napus HOM05D004738 ORTHO05D006439 2.7e-168 595.9 385 72.2
BraA07t32032Z Brassica rapa HOM05D004738 ORTHO05D006439 3.5e-168 595.5 398 70.4
BcaC08g47585 Brassica carinata HOM05D004738 ORTHO05D006439 4.5e-168 595.1 455 64.4
A07p45280 Brassica napus HOM05D004738 ORTHO05D006439 5.9e-168 594.7 393 71.0
C06p29130 Brassica napus HOM05D004738 ORTHO05D006439 1.3e-167 593.6 402 70.4
BraA07t30308Z Brassica rapa HOM05D004738 ORTHO05D006439 2.3e-167 592.8 429 67.6
CAN.G438.45 Capsicum annuum HOM05D004738 ORTHO05D006439 2.3e-167 592.8 396 69.9
BcaC08g45309 Brassica carinata HOM05D004738 ORTHO05D006439 3.8e-167 592.0 428 67.8
BolC6t38077H Brassica oleracea HOM05D004738 ORTHO05D006439 3.8e-167 592.0 428 67.8
PGR102G2550 Punica granatum HOM05D004738 ORTHO05D006439 6.6e-167 591.3 456 64.5
BcaB02g08689 Brassica carinata HOM05D004738 ORTHO05D006439 1.5e-166 590.1 398 69.3
Hund06597 Selenicereus undatus HOM05D004738 ORTHO05D006439 5.6e-166 588.2 409 69.7
PSO210G3793 Papaver somniferum HOM05D004738 ORTHO05D006439 7.3e-166 587.8 482 63.3
BcaB05g25272 Brassica carinata HOM05D004738 ORTHO05D006439 2.3e-164 582.8 375 72.0
BolC6t40426H Brassica oleracea HOM05D004738 ORTHO05D006439 2.0e-163 579.7 486 60.3
Aa31LG4G650 Aethionema arabicum HOM05D004738 ORTHO05D006439 2.6e-163 579.3 431 65.2
PSO210G6241 Papaver somniferum HOM05D004738 ORTHO05D006439 9.8e-163 577.4 397 69.3
CDE06G1313 Ceratophyllum demersum HOM05D004738 ORTHO05D006439 8.3e-162 574.3 422 66.4
AUR62016418 Chenopodium quinoa HOM05D004738 ORTHO05D006439 9.2e-161 570.9 420 67.4
MBI01_g13569_MAGBIO Magnolia biondii HOM05D004738 ORTHO05D006439 2.0e-160 569.7 413 66.8
AUR62011604 Chenopodium quinoa HOM05D004738 ORTHO05D006439 4.6e-160 568.5 409 68.5
Duzib192G0909 Durio zibethinus HOM05D004738 ORTHO05D006439 3.9e-159 565.5 350 75.1
EL10Ac9g21974 Beta vulgaris HOM05D004738 ORTHO05D006439 1.2e-157 560.5 380 70.5
Gohir.D05G127900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 8.0e-157 557.8 318 81.4
ClCG09G002360 Citrullus lanatus HOM05D004738 ORTHO05D006439 1.4e-156 557.0 369 71.0
CSS0037007 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 1.8e-156 556.6 363 73.0
Os01g0682500 Oryza sativa ssp. japonica HOM05D004738 ORTHO05D006439 1.2e-155 553.9 354 72.3
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 2.4e-153 546.2 344 74.1
ATR0083G024 Amborella trichopoda HOM05D004738 ORTHO05D006439 3.1e-148 529.3 370 66.8
Zm00001eb267390 Zea mays HOM05D004738 ORTHO05D006439 4.9e-146 521.9 346 68.8
Zm00001eb156570 Zea mays HOM05D004738 ORTHO05D006439 1.0e-143 514.2 352 68.2
Nn2g11397 Nelumbo nucifera HOM05D004738 ORTHO05D006439 2.1e-141 506.5 356 68.0
unitig_21.g20511 Utricularia gibba HOM05D004738 ORTHO05D006439 7.3e-134 481.5 398 60.6
Oeu033460.1 Olea europaea HOM05D004738 ORTHO05D006439 2.4e-132 476.5 330 68.2
AT1G80380 Arabidopsis thaliana HOM05D004738 ORTHO05D006439 1.1e-129 467.6 309 69.6
HPP92_011481 Vanilla planifolia HOM05D004738 ORTHO05D006439 1.9e-126 456.8 423 57.0
SHI09688 Sapria himalayana HOM05D004738 ORTHO05D006439 2.8e-125 453.0 335 64.5
Pp3c18_16070 Physcomitrium patens HOM05D004738 ORTHO05D006439 6.9e-124 448.4 330 61.2
SEGI_20298 Sequoiadendron giganteum HOM05D004738 ORTHO05D006439 5.4e-121 438.7 341 59.2
AagrBONN_evm.TU.Sc2ySwM_368.190 Anthoceros agrestis HOM05D004738 ORTHO05D006439 5.6e-118 428.7 339 59.0
Psat5g299520 Pisum sativum HOM05D004738 ORTHO05D006439 9.6e-118 427.9 273 73.3
BcaC03g15976 Brassica carinata HOM05D004738 ORTHO05D006439 6.9e-116 421.8 247 79.8
HPP92_011544 Vanilla planifolia HOM05D004738 ORTHO05D006439 1.5e-115 420.6 391 56.3
SMO147G0425 Selaginella moellendorffii HOM05D004738 ORTHO05D006439 1.6e-112 410.6 336 55.4
Mapoly0010s0209 Marchantia polymorpha HOM05D004738 ORTHO05D006439 3.3e-110 402.9 331 55.9
CBR_g49861 Chara braunii HOM05D004738 ORTHO05D006439 5.5e-105 385.6 367 49.3
arahy.Tifrunner.gnm1.ann1.7R7SHJ Arachis hypogaea HOM05D004738 ORTHO05D006439 4.5e-91 339.3 283 60.1
Cre12.g542300 Chlamydomonas reinhardtii HOM05D004738 ORTHO05D006439 1.8e-87 327.4 332 46.1
arahy.Tifrunner.gnm1.ann1.1FY4ZR Arachis hypogaea HOM05D004738 ORTHO05D007023 2.4e-84 317.0 276 59.4
MCO11G539 Micromonas commoda HOM05D004738 ORTHO05D006439 3.9e-79 299.7 328 44.8
PRCOL_00005044 Prasinoderma coloniale HOM05D004738 ORTHO05D006439 2.0e-78 297.4 326 47.2
Dinv38066 Davidia involucrata HOM05D004738 ORTHO05D006439 3.1e-68 263.5 145 86.9
Hund00584 Selenicereus undatus HOM05D004738 ORTHO05D006439 2.1e-56 224.2 129 77.5
arahy.Tifrunner.gnm1.ann1.CI84PE Arachis hypogaea HOM05D004738 ORTHO05D006439 6.1e-56 222.6 265 48.7
TAR636G0147 Trochodendron aralioides HOM05D004738 ORTHO05D051490 5.8e-38 162.9 164 45.7
TAR636G3653 Trochodendron aralioides HOM05D004738 ORTHO05D051490 1.3e-37 161.8 164 45.7
arahy.Tifrunner.gnm1.ann1.9N81UM Arachis hypogaea HOM05D005815 ORTHO05D007023 2.2e-37 161.0 283 36.4
Nn4g26563 Nelumbo nucifera HOM05D004738 ORTHO05D006439 1.7e-34 151.4 126 61.9
Dinv38065 Davidia involucrata HOM05D004738 ORTHO05D006439 7.3e-33 146.0 81 80.2
Ah.09g223940 Amaranthus hybridus HOM05D004738 ORTHO05D001643 5.2e-31 139.8 95 73.7
Sabra01G0149000 Salix brachista HOM05D004738 ORTHO05D006439 5.1e-26 123.2 70 72.9
arahy.Tifrunner.gnm1.ann1.GN5QKJ Arachis hypogaea HOM05D005815 ORTHO05D007023 1.7e-21 108.2 126 44.4
Nn1g05393 Nelumbo nucifera HOM05D004738 ORTHO05D280673 2.5e-17 94.4 82 54.9
Pp3c21_6430 Physcomitrium patens HOM05D004738 ORTHO05D314778 2.8e-08 64.3 52 48.1


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